DK950653 |
Clone id |
TST38A01NGRL0009_E04 |
Library |
TST38 |
Length |
692 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_E04. 5' end sequence. |
Accession |
DK950653 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1981Contig1 |
Sequence |
AGCTTCAGGAACTGTAAACCCAAATGAGTTTGATGATTGGGAGTTTGCCGATGACTTAGT ATCCGACAATGTAAATAGGTCATTGTTTGCTCAAGATACTAGATTACTGTTTTCATCTAC TCCCTCGGCGTCTTCACATTCTTCAGTGTGTGATGATACTCTGCCTTCTGATAACCGCGA CTGGCATGTTTTTGGCCTCCCTCCGACTTTTGATGAAGTGTATGCGGCAACTACTGATCT CCAGGCGGCATTCATCGAGTCCAATAATGATCATCACACCAAAAGTACATCCTCTTGCTC CACAGCTGTGGAACGTGAAGCATTCTTTCCACAAGCAAGCAACAAAGGTAGTGATTCTGA AAAAGAACCCCATTCACCACATTCTGGTGAATGGGTTGAGCCTCAGCTCTTTTTACCAAA TAAAGCAATTGTTCAAGTTACGAAGAGCCCTGTTCATGAGGCATTTCATTTACTACAGAA TGACTCGAATGTCAAGGGGGCAGTCATGTCCATTGCTTCAGACCCAGATGTGTGGCATGC CATGATGAGGAACGAGAAAGTGCAGGAATTACGACGCATCTTTGAGAAATCTCAAGGAAC AGGGAAGCTTGACACAAGCCCAATGCCTGAGCTTCCGTCAAAAGCTGATAAAGATGACGA TAAGGATGACCCTTTTGGTAGTGTCTTCTCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6F9Y2 |
Definition |
sp|Q6F9Y2|UNG_ACIAD Uracil-DNA glycosylase OS=Acinetobacter sp. (strain ADP1) |
Align length |
74 |
Score (bit) |
31.6 |
E-value |
4.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NN66 |
Definition |
tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
144 |
Score (bit) |
84.3 |
E-value |
7.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950653|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_E04, 5' (692 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea... 84 7e-15 tr|Q949B5|Q949B5_ORYSA Putative uncharacterized protein W1110ERI... 75 4e-12 tr|Q6H689|Q6H689_ORYSJ Os02g0657700 protein OS=Oryza sativa subs... 75 4e-12 tr|B8AG50|B8AG50_ORYSI Putative uncharacterized protein OS=Oryza... 75 4e-12 tr|B6TL94|B6TL94_MAIZE Putative uncharacterized protein OS=Zea m... 69 4e-10 tr|B4G1S6|B4G1S6_MAIZE Putative uncharacterized protein OS=Zea m... 69 4e-10 tr|B4FQT4|B4FQT4_MAIZE Putative uncharacterized protein OS=Zea m... 69 4e-10 tr|Q01JC7|Q01JC7_ORYSA OSIGBa0122F23.3 protein OS=Oryza sativa G... 64 7e-09 tr|Q7XU30|Q7XU30_ORYSJ Os04g0550700 protein OS=Oryza sativa subs... 62 3e-08 tr|A3AW63|A3AW63_ORYSJ Putative uncharacterized protein OS=Oryza... 62 3e-08 tr|A2XW72|A2XW72_ORYSI Putative uncharacterized protein OS=Oryza... 62 3e-08 tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea... 61 8e-08 tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella paten... 60 1e-07 tr|A7Q5B8|A7Q5B8_VITVI Chromosome undetermined scaffold_52, whol... 60 1e-07 tr|A3A9S8|A3A9S8_ORYSJ Putative uncharacterized protein OS=Oryza... 60 1e-07 tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella paten... 59 2e-07 tr|Q9SB45|Q9SB45_ARATH Putative uncharacterized protein AT4g2517... 59 3e-07 tr|Q8VYN8|Q8VYN8_ARATH Putative uncharacterized protein At4g2517... 59 3e-07 tr|A9NUF8|A9NUF8_PICSI Putative uncharacterized protein OS=Picea... 58 7e-07 tr|Q9FKH0|Q9FKH0_ARATH Genomic DNA, chromosome 5, TAC clone:K11J... 57 1e-06 tr|A5BI54|A5BI54_VITVI Putative uncharacterized protein OS=Vitis... 56 2e-06 tr|A9TGP9|A9TGP9_PHYPA Predicted protein OS=Physcomitrella paten... 52 4e-05 tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 51 6e-05 tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subs... 47 0.001 tr|A6N1C1|A6N1C1_ORYSI Putative uncharacterized protein (Fragmen... 47 0.001 tr|A3BQ82|A3BQ82_ORYSJ Putative uncharacterized protein OS=Oryza... 47 0.001 tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza... 47 0.001 tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea m... 46 0.003 tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromos... 45 0.004 tr|A7PKF7|A7PKF7_VITVI Chromosome chr15 scaffold_19, whole genom... 45 0.004
>tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 84.3 bits (207), Expect = 7e-15 Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 4/144 (2%) Frame = +2
Query: 176 RDWHVFGLPPTFDEVYAATTDLQAAFIES---NNDHHTKSTSSCSTAVEREAFFPQASNK 346 RD VFG PT +EV A +DLQ + +S + +SS TAV++ + S + Sbjct: 99 RDRVVFGAAPTKEEVEEAVSDLQGSLAQSILYPSGSQGYESSSLPTAVQKNGGSIEVS-Q 157
Query: 347 GSDSEKEPHSPHSGEWVEPQLFLPNKAIVQ-VTKSPVHEAFHLLQNDSNVKGAVMSIASD 523 SDSE E S +W+EP+L+L N +VQ + ++ V +AF LLQ + V+ V+S+ SD Sbjct: 158 CSDSESES-SKSVVDWIEPELYLYNHEVVQQLRQNDVLDAFRLLQRNHTVREMVISLVSD 216
Query: 524 PDVWHAMMRNEKVQELRRIFEKSQ 595 +W A+++NEKV E R + K + Sbjct: 217 KAIWDALLKNEKVVEFRELLHKGE 240
>tr|Q949B5|Q949B5_ORYSA Putative uncharacterized protein W1110ERIPDM OS=Oryza sativa GN=W1110ERIPDM PE=4 SV=1 Length = 318
Score = 75.1 bits (183), Expect = 4e-12 Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 3/136 (2%) Frame = +2
Query: 188 VFGLPPTFDEVYAATTDLQAAFIESNNDH--HTKSTSSCSTAVEREAFFPQASNKGSDSE 361 VF PPT DEV AA T ++ F + H T+ S+ ST+V + ++ GSD Sbjct: 117 VFWSPPTGDEVRAAFTSIEEVFGDPFRAHSYETEEQSALSTSVHSSS----GNSSGSD-- 170
Query: 362 KEPHSPHSGEWVEPQLFLPNK-AIVQVTKSPVHEAFHLLQNDSNVKGAVMSIASDPDVWH 538 +W+EP + N A++ V +AF LLQ D NV+ VMS++ D VW Sbjct: 171 ---------DWIEPAAYALNSTALLTREHRNVLDAFRLLQKDPNVQKMVMSLSCDRAVWD 221
Query: 539 AMMRNEKVQELRRIFE 586 A+M NE VQE RR F+ Sbjct: 222 AVMNNEAVQEFRRSFQ 237
>tr|Q6H689|Q6H689_ORYSJ Os02g0657700 protein OS=Oryza sativa subsp. japonica GN=OJ1112_F09.8 PE=2 SV=1 Length = 327
Score = 75.1 bits (183), Expect = 4e-12 Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 3/136 (2%) Frame = +2
Query: 188 VFGLPPTFDEVYAATTDLQAAFIESNNDH--HTKSTSSCSTAVEREAFFPQASNKGSDSE 361 VF PPT DEV AA T ++ F + H T+ S+ ST+V + ++ GSD Sbjct: 117 VFWSPPTGDEVRAAFTSIEEVFGDPFRAHSYETEEQSALSTSVHSSS----GNSSGSD-- 170
Query: 362 KEPHSPHSGEWVEPQLFLPNK-AIVQVTKSPVHEAFHLLQNDSNVKGAVMSIASDPDVWH 538 +W+EP + N A++ V +AF LLQ D NV+ VMS++ D VW Sbjct: 171 ---------DWIEPAAYALNSTALLTREHRNVLDAFRLLQKDPNVQKMVMSLSCDRAVWD 221
Query: 539 AMMRNEKVQELRRIFE 586 A+M NE VQE RR F+ Sbjct: 222 AVMNNEAVQEFRRSFQ 237
>tr|B8AG50|B8AG50_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08342 PE=4 SV=1 Length = 327
Score = 75.1 bits (183), Expect = 4e-12 Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 3/136 (2%) Frame = +2
Query: 188 VFGLPPTFDEVYAATTDLQAAFIESNNDH--HTKSTSSCSTAVEREAFFPQASNKGSDSE 361 VF PPT DEV AA T ++ F + H T+ S+ ST+V + ++ GSD Sbjct: 117 VFWSPPTGDEVRAAFTSIEEVFGDPFRAHSYETEEQSALSTSVHSSS----GNSSGSD-- 170
Query: 362 KEPHSPHSGEWVEPQLFLPNK-AIVQVTKSPVHEAFHLLQNDSNVKGAVMSIASDPDVWH 538 +W+EP + N A++ V +AF LLQ D NV+ VMS++ D VW Sbjct: 171 ---------DWIEPAAYALNSTALLTREHRNVLDAFRLLQKDPNVQKMVMSLSCDRAVWD 221
Query: 539 AMMRNEKVQELRRIFE 586 A+M NE VQE RR F+ Sbjct: 222 AVMNNEAVQEFRRSFQ 237
>tr|B6TL94|B6TL94_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 303
Score = 68.6 bits (166), Expect = 4e-10 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 1/131 (0%) Frame = +2
Query: 188 VFGLPPTFDEVYAATTDLQAAFIESNNDHHTKSTSSCSTAVEREAFFPQASNKGSDSEKE 367 VF PPT DEV A T +Q F S +R+ AS S + Sbjct: 94 VFWSPPTIDEVTGAVTSIQQVF--------ENPLGLDSDTTDRQTTLLSASGHSSGN--- 142
Query: 368 PHSPHSGEWVEPQLFLPNK-AIVQVTKSPVHEAFHLLQNDSNVKGAVMSIASDPDVWHAM 544 S S +W+EP ++ N A++ V +AF LLQ D V+ VMS++ D VW+A+ Sbjct: 143 --SSGSDDWIEPAAYVLNSTALLSREHRNVVDAFRLLQKDPTVQKMVMSLSCDKAVWNAV 200
Query: 545 MRNEKVQELRR 577 M NE VQ+ RR Sbjct: 201 MNNEAVQDFRR 211
>tr|B4G1S6|B4G1S6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 260
Score = 68.6 bits (166), Expect = 4e-10 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 1/131 (0%) Frame = +2
Query: 188 VFGLPPTFDEVYAATTDLQAAFIESNNDHHTKSTSSCSTAVEREAFFPQASNKGSDSEKE 367 VF PPT DEV A T +Q F S +R+ AS S + Sbjct: 51 VFWSPPTIDEVTGAVTSIQQVF--------ENPLGLDSDTTDRQTTLLSASGHSSGN--- 99
Query: 368 PHSPHSGEWVEPQLFLPNK-AIVQVTKSPVHEAFHLLQNDSNVKGAVMSIASDPDVWHAM 544 S S +W+EP ++ N A++ V +AF LLQ D V+ VMS++ D VW+A+ Sbjct: 100 --SSGSDDWIEPAAYVLNSTALLSREHRNVVDAFRLLQKDPTVQKMVMSLSCDKAVWNAV 157
Query: 545 MRNEKVQELRR 577 M NE VQ+ RR Sbjct: 158 MNNEAVQDFRR 168
>tr|B4FQT4|B4FQT4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 303
Score = 68.6 bits (166), Expect = 4e-10 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 1/131 (0%) Frame = +2
Query: 188 VFGLPPTFDEVYAATTDLQAAFIESNNDHHTKSTSSCSTAVEREAFFPQASNKGSDSEKE 367 VF PPT DEV A T +Q F S +R+ AS S + Sbjct: 94 VFWSPPTIDEVTGAVTSIQQVF--------ENPLGLDSDTTDRQTTLLSASGHSSGN--- 142
Query: 368 PHSPHSGEWVEPQLFLPNK-AIVQVTKSPVHEAFHLLQNDSNVKGAVMSIASDPDVWHAM 544 S S +W+EP ++ N A++ V +AF LLQ D V+ VMS++ D VW+A+ Sbjct: 143 --SSGSDDWIEPAAYVLNSTALLSREHRNVVDAFRLLQKDPTVQKMVMSLSCDKAVWNAV 200
Query: 545 MRNEKVQELRR 577 M NE VQ+ RR Sbjct: 201 MNNEAVQDFRR 211
>tr|Q01JC7|Q01JC7_ORYSA OSIGBa0122F23.3 protein OS=Oryza sativa GN=OSIGBa0122F23.3 PE=4 SV=1 Length = 372
Score = 64.3 bits (155), Expect = 7e-09 Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 38/187 (20%) Frame = +2
Query: 149 CDDTLPSDN---------RDWHV--FGLPPTFDEVYAATTDLQAAF-----IESNNDHHT 280 CDD + +D+ D H FG PPT EV AA +Q F ++S+ Sbjct: 112 CDDAVGADSGAFDAVQEAADEHAEAFGAPPTDQEVRAAVASIQEVFENHPGLDSDAPAQA 171
Query: 281 KSTSSCSTAVEREAF---FPQASNKGSDSEKEPHSPH------------------SGEWV 397 + S S F F + S SD + E +P S E + Sbjct: 172 LALSPISGLPPSGMFVNYFAEGSTP-SDIKIEDSTPSDVKIDQLASLEHSTPDTASEECI 230
Query: 398 EPQLFLPNK-AIVQVTKSPVHEAFHLLQNDSNVKGAVMSIASDPDVWHAMMRNEKVQELR 574 EP + + N A++ V +AFHLLQ DS+V+ VM++++D VW A+M+NE VQE R Sbjct: 231 EPAMLVLNSTALLTREHRNVLDAFHLLQVDSSVQKMVMALSTDKSVWDAVMKNEVVQEFR 290
Query: 575 RIFEKSQ 595 + F+ ++ Sbjct: 291 KSFQDAK 297
>tr|Q7XU30|Q7XU30_ORYSJ Os04g0550700 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0034G17.10 PE=2 SV=2 Length = 372
Score = 62.4 bits (150), Expect = 3e-08 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 27/162 (16%) Frame = +2
Query: 191 FGLPPTFDEVYAATTDLQAAF-----IESNNDHHTKSTSSCSTAVEREAF---FPQASNK 346 FG PPT EV AA +Q F ++S+ + S S F F + S Sbjct: 137 FGAPPTDQEVRAAVASIQEVFENHPGLDSDAPAQALALSPISGLPPSGMFVNYFSEGSTP 196
Query: 347 GSDSEKEPHSPH------------------SGEWVEPQLFLPNK-AIVQVTKSPVHEAFH 469 SD + E +P S E +EP + + N A++ V +AFH Sbjct: 197 -SDIKIEDSTPSDVKIDQLASLEHSTPDTASEECIEPAMLVLNSTALLTREHRNVLDAFH 255
Query: 470 LLQNDSNVKGAVMSIASDPDVWHAMMRNEKVQELRRIFEKSQ 595 LLQ DS+V+ VM++++D VW A+M+NE VQE R+ F+ ++ Sbjct: 256 LLQVDSSVQKMVMALSTDKSVWDAVMKNEVVQEFRKSFQDAK 297
>tr|A3AW63|A3AW63_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_015035 PE=4 SV=1 Length = 359
Score = 62.4 bits (150), Expect = 3e-08 Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 27/162 (16%) Frame = +2
Query: 191 FGLPPTFDEVYAATTDLQAAF-----IESNNDHHTKSTSSCSTAVEREAF---FPQASNK 346 FG PPT EV AA +Q F ++S+ + S S F F + S Sbjct: 124 FGAPPTDQEVRAAVASIQEVFENHPGLDSDAPAQALALSPISGLPPSGMFVNYFSEGSTP 183
Query: 347 GSDSEKEPHSPH------------------SGEWVEPQLFLPNK-AIVQVTKSPVHEAFH 469 SD + E +P S E +EP + + N A++ V +AFH Sbjct: 184 -SDIKIEDSTPSDVKIDQLASLEHSTPDTASEECIEPAMLVLNSTALLTREHRNVLDAFH 242
Query: 470 LLQNDSNVKGAVMSIASDPDVWHAMMRNEKVQELRRIFEKSQ 595 LLQ DS+V+ VM++++D VW A+M+NE VQE R+ F+ ++ Sbjct: 243 LLQVDSSVQKMVMALSTDKSVWDAVMKNEVVQEFRKSFQDAK 284
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