DK950654 |
Clone id |
TST38A01NGRL0009_E05 |
Library |
TST38 |
Length |
641 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_E05. 5' end sequence. |
Accession |
DK950654 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1815Contig1 |
Sequence |
GGCGCGATGGTGCAGAGGCTCACGTATCGTCGCCGCCATAGCTATGCAACCAAGTCCAAT CAGACCCGCGTCGTAAAGACGCCAGGTGGGAAGCTTGTCTTGCAGTACGCCAAGAAGAGA GCAAATGGGCCAAAGTGTGCCATCACAGGGAAGCGCATACAAGGGATTCCTCATCTGCGC CCCGCTGAATATAGAAACACGCGTCTTAGCAAGAGGCAAAAGACTGTAAACCGAGCGTAT GGCGGCGCTTTGTCAGGAGGGGCAGTTCGAGAGAGAATTATCAGAGCTTTTCTTGTGGAG GAGCAGAAGATTGTGAAGAAAGTGCTGAAGATTCAAAAGTCGAAGGAGAAGCAGGCATCA AAGGTTTATTATTATGGCCCCCAATGCTACTCCCTTTACCATTATCACAAAAGAAGAGGT GCCTTCCTTTATTTGTAACATTGGCGATCAACAAGATGGCTCTACTTTAAAGTAGGCTGA GCTATAAATCTGTTAGGAAATTTTGGAAACTGTATTTGGTCATGAAACGAAGGCAATATT ATCTTAAGCTCCGCTACTTGTGTTTGATGTCATCTAGTGACATTGAGGTTTCTTATATCC TTTGAACTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P40590 |
Definition |
sp|P40590|RL34_PEA 60S ribosomal protein L34 OS=Pisum sativum |
Align length |
95 |
Score (bit) |
164.0 |
E-value |
3.0e-40 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6UGU1 |
Definition |
tr|B6UGU1|B6UGU1_MAIZE 60S ribosomal protein L34 OS=Zea mays |
Align length |
95 |
Score (bit) |
165.0 |
E-value |
2.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950654|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_E05, 5' (612 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6UGU1|B6UGU1_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=... 165 2e-39 tr|B4FGQ6|B4FGQ6_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=... 164 3e-39 tr|A5C1J0|A5C1J0_VITVI Putative uncharacterized protein (Chromos... 164 3e-39 tr|A3BYS9|A3BYS9_ORYSJ Putative uncharacterized protein OS=Oryza... 164 3e-39 tr|A2Z177|A2Z177_ORYSI Putative uncharacterized protein OS=Oryza... 164 3e-39 tr|B6UH15|B6UH15_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=... 164 5e-39 tr|B6U6W1|B6U6W1_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=... 164 5e-39 tr|Q6ZD96|Q6ZD96_ORYSJ Os08g0156800 protein OS=Oryza sativa subs... 163 6e-39 tr|Q6Z537|Q6Z537_ORYSJ Os08g0436800 protein OS=Oryza sativa subs... 163 6e-39 tr|B6SIF8|B6SIF8_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=... 163 6e-39 tr|A2YVK0|A2YVK0_ORYSI Putative uncharacterized protein OS=Oryza... 163 6e-39 tr|Q5I7K8|Q5I7K8_WHEAT Ribosomal protein l34 OS=Triticum aestivu... 162 1e-38 tr|Q2HVS3|Q2HVS3_MEDTR Putative uncharacterized protein OS=Medic... 162 1e-38 tr|B7FHA0|B7FHA0_MEDTR Putative uncharacterized protein OS=Medic... 162 1e-38 tr|B6UE26|B6UE26_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=... 162 1e-38 tr|B6T8R5|B6T8R5_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=... 162 1e-38 tr|A9PDF8|A9PDF8_POPTR Putative uncharacterized protein OS=Popul... 162 1e-38 tr|A9P8R1|A9P8R1_POPTR Putative uncharacterized protein OS=Popul... 162 1e-38 tr|Q6L414|Q6L414_SOLDE 60S ribosomal protein L34, putative OS=So... 162 2e-38 tr|A9PB27|A9PB27_POPTR Putative uncharacterized protein OS=Popul... 162 2e-38 tr|A4UV11|A4UV11_SOLTU Putative ribosomal protein L34e OS=Solanu... 162 2e-38 tr|B6T098|B6T098_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=... 161 2e-38 tr|B4FXX2|B4FXX2_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=... 161 2e-38 tr|B7FFC0|B7FFC0_MEDTR Putative uncharacterized protein OS=Medic... 160 5e-38 tr|A9NL31|A9NL31_PICSI Putative uncharacterized protein OS=Picea... 159 1e-37 tr|Q207T4|Q207T4_9ASPA Ribosomal protein OS=Gymnadenia conopsea ... 158 3e-37 tr|Q676Z4|Q676Z4_HYAOR Ribosomal protein L34 OS=Hyacinthus orien... 156 1e-36 tr|Q6L3T8|Q6L3T8_SOLDE 60S ribosomal protein L34, putative OS=So... 155 2e-36 tr|A9S0K9|A9S0K9_PHYPA Predicted protein OS=Physcomitrella paten... 155 2e-36 tr|A9SGF2|A9SGF2_PHYPA Predicted protein OS=Physcomitrella paten... 154 4e-36
>tr|B6UGU1|B6UGU1_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=4 SV=1 Length = 119
Score = 165 bits (417), Expect = 2e-39 Identities = 78/95 (82%), Positives = 87/95 (91%) Frame = +1
Query: 7 MVQRLTYRRRHSYATKSNQTRVVKTPGGKLVLQYAKKRANGPKCAITGKRIQGIPHLRPA 186 MVQRLTYR+RHSYATKSNQTRVVKTPGGKLV QY KKRA+GPKC +TGK+IQGIPHLRPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 187 EYRNTRLSKRQKTVNRAYGGALSGGAVRERIIRAF 291 EY+ +RL++ Q+TVNR YGG LSG AVRERIIRAF Sbjct: 61 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 95
>tr|B4FGQ6|B4FGQ6_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=4 SV=1 Length = 120
Score = 164 bits (416), Expect = 3e-39 Identities = 78/95 (82%), Positives = 87/95 (91%) Frame = +1
Query: 7 MVQRLTYRRRHSYATKSNQTRVVKTPGGKLVLQYAKKRANGPKCAITGKRIQGIPHLRPA 186 MVQRLTYR+RHSYATKSNQTRVVKTPGGKLV QY KKRA+GPKC +TGK+IQGIPHLRPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 187 EYRNTRLSKRQKTVNRAYGGALSGGAVRERIIRAF 291 EY+ +RLS+ ++TVNR YGG LSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>tr|A5C1J0|A5C1J0_VITVI Putative uncharacterized protein (Chromosome chr14 scaffold_21, whole genome shotgun sequence) (Chromosome chr1 scaffold_84, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00020970001 PE=4 SV=1 Length = 120
Score = 164 bits (416), Expect = 3e-39 Identities = 79/95 (83%), Positives = 86/95 (90%) Frame = +1
Query: 7 MVQRLTYRRRHSYATKSNQTRVVKTPGGKLVLQYAKKRANGPKCAITGKRIQGIPHLRPA 186 MVQRLTYR+RHSYATKSNQ RVVKTPGGKLV Q KKRANGPKC +TGKRIQGIPHLRPA Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRANGPKCPVTGKRIQGIPHLRPA 60
Query: 187 EYRNTRLSKRQKTVNRAYGGALSGGAVRERIIRAF 291 EY+ +RL + ++TVNRAYGG LSGGAVRERIIRAF Sbjct: 61 EYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95
>tr|A3BYS9|A3BYS9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028201 PE=4 SV=1 Length = 119
Score = 164 bits (416), Expect = 3e-39 Identities = 78/95 (82%), Positives = 87/95 (91%) Frame = +1
Query: 7 MVQRLTYRRRHSYATKSNQTRVVKTPGGKLVLQYAKKRANGPKCAITGKRIQGIPHLRPA 186 MVQRLTYR+RHSYATKSNQTRVVKTPGGKLV QY KKRA+GPKC +TGK+IQGIPHLRPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 187 EYRNTRLSKRQKTVNRAYGGALSGGAVRERIIRAF 291 EY+ +RLS+ ++TVNR YGG LSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>tr|A2Z177|A2Z177_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31355 PE=4 SV=1 Length = 119
Score = 164 bits (416), Expect = 3e-39 Identities = 78/95 (82%), Positives = 87/95 (91%) Frame = +1
Query: 7 MVQRLTYRRRHSYATKSNQTRVVKTPGGKLVLQYAKKRANGPKCAITGKRIQGIPHLRPA 186 MVQRLTYR+RHSYATKSNQTRVVKTPGGKLV QY KKRA+GPKC +TGK+IQGIPHLRPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 187 EYRNTRLSKRQKTVNRAYGGALSGGAVRERIIRAF 291 EY+ +RLS+ ++TVNR YGG LSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>tr|B6UH15|B6UH15_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=2 SV=1 Length = 186
Score = 164 bits (414), Expect = 5e-39 Identities = 78/95 (82%), Positives = 87/95 (91%) Frame = +1
Query: 7 MVQRLTYRRRHSYATKSNQTRVVKTPGGKLVLQYAKKRANGPKCAITGKRIQGIPHLRPA 186 MVQRLTYR+RHSYATKSNQTRVVKTPGGKLV QY KKRA+GPKC +TGK+IQGIPHLRPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 187 EYRNTRLSKRQKTVNRAYGGALSGGAVRERIIRAF 291 EY+ +RLS+ ++TVNR YGG LSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGIAVRERIIRAF 95
>tr|B6U6W1|B6U6W1_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=4 SV=1 Length = 119
Score = 164 bits (414), Expect = 5e-39 Identities = 78/95 (82%), Positives = 86/95 (90%) Frame = +1
Query: 7 MVQRLTYRRRHSYATKSNQTRVVKTPGGKLVLQYAKKRANGPKCAITGKRIQGIPHLRPA 186 MVQRLTYR+RHSYATKSNQTRVVKTPGGKLV QY KKRA+GPKC TGK+IQGIPHLRPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPFTGKKIQGIPHLRPA 60
Query: 187 EYRNTRLSKRQKTVNRAYGGALSGGAVRERIIRAF 291 EY+ +RL++ Q+TVNR YGG LSG AVRERIIRAF Sbjct: 61 EYKRSRLARNQRTVNRPYGGVLSGTAVRERIIRAF 95
>tr|Q6ZD96|Q6ZD96_ORYSJ Os08g0156800 protein OS=Oryza sativa subsp. japonica GN=P0438H08.20 PE=4 SV=1 Length = 118
Score = 163 bits (413), Expect = 6e-39 Identities = 77/95 (81%), Positives = 87/95 (91%) Frame = +1
Query: 7 MVQRLTYRRRHSYATKSNQTRVVKTPGGKLVLQYAKKRANGPKCAITGKRIQGIPHLRPA 186 MVQRLTYR+RHSYATKSNQTRVVKTPGG+LV QY KKRA+GPKC +TGK+IQGIPHLRPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 187 EYRNTRLSKRQKTVNRAYGGALSGGAVRERIIRAF 291 EY+ +RLS+ ++TVNR YGG LSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>tr|Q6Z537|Q6Z537_ORYSJ Os08g0436800 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0016C11.12 PE=4 SV=1 Length = 118
Score = 163 bits (413), Expect = 6e-39 Identities = 77/95 (81%), Positives = 87/95 (91%) Frame = +1
Query: 7 MVQRLTYRRRHSYATKSNQTRVVKTPGGKLVLQYAKKRANGPKCAITGKRIQGIPHLRPA 186 MVQRLTYR+RHSYATKSNQTRVVKTPGG+LV QY KKRA+GPKC +TGK+IQGIPHLRPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 187 EYRNTRLSKRQKTVNRAYGGALSGGAVRERIIRAF 291 EY+ +RLS+ ++TVNR YGG LSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>tr|B6SIF8|B6SIF8_MAIZE 60S ribosomal protein L34 OS=Zea mays PE=4 SV=1 Length = 119
Score = 163 bits (413), Expect = 6e-39 Identities = 78/95 (82%), Positives = 86/95 (90%) Frame = +1
Query: 7 MVQRLTYRRRHSYATKSNQTRVVKTPGGKLVLQYAKKRANGPKCAITGKRIQGIPHLRPA 186 MVQRLTYR+RHSYATKSNQTRVVKTPGGKLV QY KKRA+GPKC +TGK+IQGIPHLRPA Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 187 EYRNTRLSKRQKTVNRAYGGALSGGAVRERIIRAF 291 EY+ +RLS+ +TVNR YGG LSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNHRTVNRPYGGVLSGIAVRERIIRAF 95
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