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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950657
Clone id TST38A01NGRL0009_E08
Library
Length 683
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_E08. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CTGACCGCCTCGGCCCAGAGCTTTGTCGGAGCTCAAGTCGCAGCAGCGGAAGAACAAAAA
GAACGCGCAGACACAGCAGACCCAAGAAGCCGTAGCCGAAGCAGCAGTAGGAGTAGTAGA
AGAAGAAAAGTAGTGGTGCAAGAGCTCATGAACTTTCCCAGAACTACATAATGTGCATTT
CCTACTCAAAGATTAGTTGCATCTCATACTCATCTTTGATTACATGAGAAAAACCCTTCT
TCTCAAAGGAGATAAATGGGTTTAGACACTCTGCGAGGCAGCTTGGCTGGTCTTGTTTCT
TCTTGGTCACCAATCAAACAATCTACGGAAGCTCCCCAAACGTATGTTCATACCAGTAAG
TCAGGCATTCTCAGGGGTTGTTCTCTAAGCTCACAAAAGCACACCCGCCTCTTTGTGGCT
CGTGGCAGCGGTAATAATGGTTCTGTATTTGCATCGCGGCCAGATTCAGACAGCAATGAG
CAGCCTCGTCAAGCTGCAGGAGTCCCTGACTCGCCATCCAAGGCTAGTCAAAATTTGAAG
AACCAACCTGGTCCAGTTAGTAAACAGATTATTGAAAATTCTATTGACAAAAGTCGTGGA
AGTTTTGAGGGTGTTCAGCAACAGCAGCAGCATCTTACAGAGCAGGGTCAAGACAAGAGT
CTGACCAGTTATGAAGGCGATCT
■■Homology search results ■■ -
sp_hit_id Q6GQX2
Definition sp|Q6GQX2|K1602_MOUSE Uncharacterized protein KIAA1602 homolog OS=Mus musculus
Align length 81
Score (bit) 34.3
E-value 0.61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950657|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_E08, 5'
         (665 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6GQX2|K1602_MOUSE Uncharacterized protein KIAA1602 homolog O...    34   0.61 
sp|Q9HCH0|K1602_HUMAN Uncharacterized protein KIAA1602 OS=Homo s...    34   0.79 
sp|Q05512|MARK2_MOUSE Serine/threonine-protein kinase MARK2 OS=M...    32   2.3  
sp|O08679|MARK2_RAT Serine/threonine-protein kinase MARK2 OS=Rat...    32   3.9  
sp|Q7KZI7|MARK2_HUMAN Serine/threonine-protein kinase MARK2 OS=H...    31   5.2  
sp|O55112|AFF2_MOUSE AF4/FMR2 family member 2 OS=Mus musculus GN...    31   6.7  
sp|P35929|Y48K_ELV Uncharacterized 48 kDa protein OS=Erysimum la...    30   8.8  
sp|Q3UR50|VW5B2_MOUSE von Willebrand factor A domain-containing ...    30   8.8  
sp|Q5A216|NDC80_CANAL Probable kinetochore protein NDC80 OS=Cand...    30   8.8  
sp|Q5U2M8|MDC1_RAT Mediator of DNA damage checkpoint protein 1 O...    30   8.8  

>sp|Q6GQX2|K1602_MOUSE Uncharacterized protein KIAA1602 homolog
           OS=Mus musculus PE=2 SV=1
          Length = 1323

 Score = 34.3 bits (77), Expect = 0.61
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 17/81 (20%)
 Frame = +1

Query: 403 RGSGNNGS---VFASRPDSDSNEQPRQAAGVPDSP--------------SKASQNLKNQP 531
           R SG++GS   + A R        P  A G+P SP              S+++ +    P
Sbjct: 485 RNSGSDGSPSPLLARRGLGGGELSPEGAQGLPGSPLPCSAMPDSAQLRPSQSTVSTALSP 544

Query: 532 GPVSKQIIENSIDKSRGSFEG 594
           GPV     EN +D SR +F G
Sbjct: 545 GPVVSPCFENILDLSRSTFRG 565


>sp|Q9HCH0|K1602_HUMAN Uncharacterized protein KIAA1602 OS=Homo
           sapiens GN=KIAA1602 PE=1 SV=2
          Length = 1330

 Score = 33.9 bits (76), Expect = 0.79
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 17/81 (20%)
 Frame = +1

Query: 403 RGSGNNGS---VFASRPDSDSNEQPRQAAGVPDSPS--------------KASQNLKNQP 531
           R SG++GS   + A R        P  A G+P SPS              +++ +    P
Sbjct: 485 RNSGSDGSPSPLLARRGLGGGELSPEGAQGLPTSPSPCYTTPDSTQLRPPQSALSTTLSP 544

Query: 532 GPVSKQIIENSIDKSRGSFEG 594
           GPV     EN +D SR +F G
Sbjct: 545 GPVVSPCYENILDLSRSTFRG 565


>sp|Q05512|MARK2_MOUSE Serine/threonine-protein kinase MARK2 OS=Mus
           musculus GN=Mark2 PE=1 SV=3
          Length = 776

 Score = 32.3 bits (72), Expect = 2.3
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 439 RPDSDSNEQPRQAAGVPDSPSKASQNLKNQPGPVSKQIIENSIDKSRGS 585
           RP+ ++  +    A VP SP       K  P P +  ++  S ++SR S
Sbjct: 435 RPEEETGRKASSTAKVPASPLPGLDRKKTTPAPSTNSVLSTSTNRSRNS 483


>sp|O08679|MARK2_RAT Serine/threonine-protein kinase MARK2 OS=Rattus
           norvegicus GN=Mark2 PE=1 SV=1
          Length = 722

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 439 RPDSDSNEQPRQAAGVPDSPSKASQNLKNQPGPVSKQIIENSIDKSRGS 585
           RP+ ++  +    A VP SP       K  P P +  ++  S ++SR S
Sbjct: 435 RPEEETGRKASSTAKVPASPLPGLDRKKTTPTPSTNSVLSTSTNRSRNS 483


>sp|Q7KZI7|MARK2_HUMAN Serine/threonine-protein kinase MARK2 OS=Homo
           sapiens GN=MARK2 PE=1 SV=2
          Length = 788

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = +1

Query: 415 NNGSVFASRPDSDSNEQPRQAAGVPDSPSKASQNLKNQPGPVSKQIIENSIDKSRGS 585
           NN        D +S  +    A VP SP    +  K  P P +  ++  S ++SR S
Sbjct: 430 NNAENKRPEEDRESGRKASSTAKVPASPLPGLERKKTTPTPSTNSVLSTSTNRSRNS 486


>sp|O55112|AFF2_MOUSE AF4/FMR2 family member 2 OS=Mus musculus
           GN=Aff2 PE=2 SV=1
          Length = 1272

 Score = 30.8 bits (68), Expect = 6.7
 Identities = 28/91 (30%), Positives = 37/91 (40%)
 Frame = +1

Query: 277 VSSWSPIKQSTEAPQTYVHTSKSGILRGCSLSSQKHTRLFVARGSGNNGSVFASRPDSDS 456
           V+S     QST A QT V         G   SS+  +       S ++    +S  DS+S
Sbjct: 430 VNSLLATPQSTPATQTNV---------GSGSSSESES------SSESDSDTESSTTDSES 474

Query: 457 NEQPRQAAGVPDSPSKASQNLKNQPGPVSKQ 549
           NE PR A   P+ PS     L      V+ Q
Sbjct: 475 NEAPRVATPEPEPPSTNKWQLDKWLNKVTSQ 505


>sp|P35929|Y48K_ELV Uncharacterized 48 kDa protein OS=Erysimum
           latent virus PE=3 SV=1
          Length = 440

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
 Frame = +1

Query: 400 ARGSGNNGSVFASRPDSDSNEQPRQAAGVPDSPSKASQNLK----------NQPGPVSKQ 549
           +R S + GS F   P S ++ +P        +PS AS+NL+          N P   S+ 
Sbjct: 258 SRFSEDKGSDFLPNPPSSNSSEPGLPGRPSQAPSCASENLRRPLHLHSSNPNSPHFRSRW 317

Query: 550 IIENSIDKSR 579
           I +NS+ ++R
Sbjct: 318 IRKNSVKQAR 327


>sp|Q3UR50|VW5B2_MOUSE von Willebrand factor A domain-containing
            protein 5B2 OS=Mus musculus GN=Vwa5b2 PE=2 SV=2
          Length = 1248

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 26/101 (25%), Positives = 42/101 (41%)
 Frame = +1

Query: 250  TLRGSLAGLVSSWSPIKQSTEAPQTYVHTSKSGILRGCSLSSQKHTRLFVARGSGNNGSV 429
            T R  L G +  WS     ++  +    ++    L    LS+  H++       G+ G  
Sbjct: 948  TTREVLPGALQVWS-----SDPAELSGMSASQDQLAAAPLSTAVHSK-------GHQGGC 995

Query: 430  FASRPDSDSNEQPRQAAGVPDSPSKASQNLKNQPGPVSKQI 552
             A   D D N+  + A G P SP+     L +QP P S ++
Sbjct: 996  SAGAWDLDLNDNSKSALGEPISPTGDHHGLPHQP-PASSRL 1035


>sp|Q5A216|NDC80_CANAL Probable kinetochore protein NDC80 OS=Candida
           albicans GN=NDC80 PE=3 SV=1
          Length = 788

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 433 ASRPDSDSNEQPRQAAGVPDSPSKASQNLKNQPGPVSKQIIENSIDK 573
           +S+P S   +Q +Q A +P S S + Q     P P+  +  +  I K
Sbjct: 168 SSQPSSQQYQQQQQQANIPSSASSSQQQQSMDPRPLKDKKYQELIQK 214


>sp|Q5U2M8|MDC1_RAT Mediator of DNA damage checkpoint protein 1
           OS=Rattus norvegicus GN=Mdc1 PE=2 SV=2
          Length = 1279

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
 Frame = +1

Query: 316 PQTYVHTSKSGILRGCSLSSQKHTRLFVARGSGNNGSVFASRP--DSDSNEQPRQAAGVP 489
           P++ +   K+  +RG S +S    R+ +A  S   G   + R   +   N     A  VP
Sbjct: 141 PRSLLTIEKTPRIRGRSQNS----RVLLAEDSEEEGDFPSGRSVANGSRNTASPSATVVP 196

Query: 490 DSPSKASQNLKNQPGPVSKQIIENSIDKSRGSFEGV 597
           +S  + S    + PGP S   + +  D+S+G   GV
Sbjct: 197 ESDEEGSSPGPSVPGPSSPFGLGSDTDESQGQQPGV 232
tr_hit_id A4VEZ3
Definition tr|A4VEZ3|A4VEZ3_TETTH Protein will die slowly, putative OS=Tetrahymena thermophila SB210
Align length 104
Score (bit) 35.4
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950657|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_E08, 5'
         (665 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4VEZ3|A4VEZ3_TETTH Protein will die slowly, putative OS=Tetr...    35   3.2  
tr|B6KEI6|B6KEI6_TOXGO Serine/threonine-protein kinase, putative...    35   5.5  
tr|Q4WMU7|Q4WMU7_ASPFU M protein repeat protein OS=Aspergillus f...    35   5.5  
tr|B0Y7Q4|B0Y7Q4_ASPFC Putative uncharacterized protein OS=Asper...    35   5.5  
tr|B6L830|B6L830_BRAFL Putative uncharacterized protein OS=Branc...    34   7.1  
tr|B8PGI3|B8PGI3_9APHY Predicted protein OS=Postia placenta Mad-...    34   9.3  

>tr|A4VEZ3|A4VEZ3_TETTH Protein will die slowly, putative
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00443109 PE=4
           SV=1
          Length = 383

 Score = 35.4 bits (80), Expect = 3.2
 Identities = 27/104 (25%), Positives = 46/104 (44%)
 Frame = +1

Query: 247 DTLRGSLAGLVSSWSPIKQSTEAPQTYVHTSKSGILRGCSLSSQKHTRLFVARGSGNNGS 426
           D L+G   G++  +SP    +      +  SK G +R   L  +K T   +    GN+ S
Sbjct: 12  DKLKGHKDGVIKIYSPYGPDSGL---LLSASKDGCIRAWDLIERKITVKLLLSRDGNDTS 68

Query: 427 VFASRPDSDSNEQPRQAAGVPDSPSKASQNLKNQPGPVSKQIIE 558
             A + D D      Q +G  D  ++  +N++ Q    SK+ I+
Sbjct: 69  QMAYQKDDD------QQSGDDDDVNRDEENVQQQKNKDSKKTID 106


>tr|B6KEI6|B6KEI6_TOXGO Serine/threonine-protein kinase, putative
            OS=Toxoplasma gondii ME49 GN=TGME49_025960 PE=4 SV=1
          Length = 3956

 Score = 34.7 bits (78), Expect = 5.5
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
 Frame = +1

Query: 289  SPIKQSTEAPQTYVHTSKSGILRG--CSLSSQKHTRLFVARGSGNNGSVFASRPDSDSNE 462
            +P   S E+   Y + S S   RG   S S   H      RG G  G V A+ P  +   
Sbjct: 980  APPTPSKESSIRYTYASSSRASRGDASSASQSPHASPERLRGKGLAGVVCAAPPQRERRR 1039

Query: 463  Q-----PRQAAGVPDSPSKASQNLKNQPGPVSKQIIENSIDKSR 579
                  P Q + V  SPS++  +  +  G VS  ++++   +SR
Sbjct: 1040 DLRAATPLQRSLVVSSPSRSMFSFASPQGAVSVSVVKSRRSRSR 1083


>tr|Q4WMU7|Q4WMU7_ASPFU M protein repeat protein OS=Aspergillus
           fumigatus GN=AFUA_6G08660 PE=4 SV=1
          Length = 1239

 Score = 34.7 bits (78), Expect = 5.5
 Identities = 26/91 (28%), Positives = 46/91 (50%)
 Frame = +1

Query: 256 RGSLAGLVSSWSPIKQSTEAPQTYVHTSKSGILRGCSLSSQKHTRLFVARGSGNNGSVFA 435
           R S+AG  +S SP  + + AP T   T  +G+      S+   T   VAR +    +  A
Sbjct: 188 RSSIAGTTTSRSPATRPSTAPSTKPATKPTGVSSTSRTSNSTSTT--VARPAARPMAT-A 244

Query: 436 SRPDSDSNEQPRQAAGVPDSPSKASQNLKNQ 528
           +RP + ++++   A  V D  ++  Q+L+N+
Sbjct: 245 TRPTTTASKRLSTAIKVSDDEAEKLQSLQNK 275


>tr|B0Y7Q4|B0Y7Q4_ASPFC Putative uncharacterized protein
           OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
           FGSC A1163) GN=AFUB_074620 PE=4 SV=1
          Length = 1178

 Score = 34.7 bits (78), Expect = 5.5
 Identities = 26/91 (28%), Positives = 46/91 (50%)
 Frame = +1

Query: 256 RGSLAGLVSSWSPIKQSTEAPQTYVHTSKSGILRGCSLSSQKHTRLFVARGSGNNGSVFA 435
           R S+AG  +S SP  + + AP T   T  +G+      S+   T   VAR +    +  A
Sbjct: 188 RSSIAGTTTSRSPATRPSTAPSTKPATKPTGVSSTSRTSNSTSTT--VARPAARPMAT-A 244

Query: 436 SRPDSDSNEQPRQAAGVPDSPSKASQNLKNQ 528
           +RP + ++++   A  V D  ++  Q+L+N+
Sbjct: 245 TRPTTTASKRLSTAIKVSDDEAEKLQSLQNK 275


>tr|B6L830|B6L830_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_67274 PE=4 SV=1
          Length = 3167

 Score = 34.3 bits (77), Expect = 7.1
 Identities = 25/74 (33%), Positives = 29/74 (39%)
 Frame = +1

Query: 307  TEAPQTYVHTSKSGILRGCSLSSQKHTRLFVARGSGNNGSVFASRPDSDSNEQPRQAAGV 486
            TEA +T      S    G S SSQKHT     R +      F S PD     Q     G 
Sbjct: 2440 TEASETEASQDTSSEAAGPSASSQKHTAAVPDRAAREQYDGFPSPPDMSLLGQDGGGWGA 2499

Query: 487  PDSPSKASQNLKNQ 528
             D+ +K  Q   NQ
Sbjct: 2500 EDATNKDHQEQYNQ 2513


>tr|B8PGI3|B8PGI3_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_95030 PE=4 SV=1
          Length = 1188

 Score = 33.9 bits (76), Expect = 9.3
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
 Frame = +1

Query: 202 LHEKNPSSQRR*MGLDTLRGSLAGL---VSSWSPIKQSTEAPQTYVHTSKSGILRGCSLS 372
           +H   P        L++ +GSL  +   +S  SP+  S  AP + +HT  S   R  S+ 
Sbjct: 674 VHSTQPEVVHPRAALNSEQGSLHSMRSHLSPHSPLNTSGSAPASSLHTHHSSSSRP-SMH 732

Query: 373 SQKHTRLFVARGSGNNGSVFASRPDSDSNEQPRQAAGVPDSPSKASQNLKNQPGP 537
           SQ  T         + GS+  S   S+ + +PR+   V +  S A   + ++ GP
Sbjct: 733 SQGLT-------GSSGGSLAHSNSISEDDRRPRRRGAVGEVSSPALSAVFSREGP 780