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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950669
Clone id TST38A01NGRL0009_E21
Library
Length 668
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_E21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CTTTACGAATGGAGTCATGGAGAAGCCAGGGAACAAAAGGCCCCCTCCAGATGAGAGTTT
CTTCAAGTGGTTTACCGAGACAGATGCGAAAGATTCTTCTGTTGGGGTAAACGACGAGGT
AGCTGATATCATCAAGGAGGATTTATGGCCAAATCCCTTGAAATACTTCAATAATGAGGG
TGATGATGATGATGATGAGTTCGAAGATGAAGATGGTGAAGATGATGATGATGAGGATGA
TGAGCAGGGTAATGGTGCTGAAGAGGATGGCGAAGAAGAGCCTGATGACGACGAGGATGA
GGATGAGTAGATTTAGCCCTCTTCTGTGAGTAACATGCTTCTTGTATCTGGGGCCATGAA
ATTGCTCATCGTCTCCTGATACCACTGACTTAACTCAGTTGAACTTGAGGGATGGCTTCA
AAATTTTGACACTTCACATGAATCCTAAAGGTTTGTTTTGGAAAGTTTTGGGAGGTCCTC
TGACTAGGCTGTATATCAAGGCACCTGAAGTCAGTTCTTGCTTCCTGTATTTTAGACTTC
TCAGGGGCAGCTTTTCCTGTTTTTTTTCTTAAAACCTTATTACATTCAAAGCCAAGTCTT
AGGCCAGTGAGTCTAGTGTGTTATCTATGGCCATTCTCTTTAGCTGAGCTGTTCTGTGCC
CTTGATCC
■■Homology search results ■■ -
sp_hit_id P53997
Definition sp|P53997|SET_DROME Protein SET OS=Drosophila melanogaster
Align length 55
Score (bit) 52.4
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950669|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_E21, 5'
         (668 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P53997|SET_DROME Protein SET OS=Drosophila melanogaster GN=Se...    52   2e-06
sp|Q5R5G8|TSYL1_PONAB Testis-specific Y-encoded-like protein 1 O...    49   3e-05
sp|Q9H0U9|TSYL1_HUMAN Testis-specific Y-encoded-like protein 1 O...    49   3e-05
sp|O88852|TSYL1_MOUSE Testis-specific Y-encoded-like protein 1 O...    48   4e-05
sp|Q0P5N2|TSYL1_BOVIN Testis-specific Y-encoded-like protein 1 O...    47   9e-05
sp|Q63945|SET_RAT Protein SET OS=Rattus norvegicus GN=Set PE=1 SV=2    47   1e-04
sp|Q9EQU5|SET_MOUSE Protein SET OS=Mus musculus GN=Set PE=1 SV=1       47   1e-04
sp|Q01105|SET_HUMAN Protein SET OS=Homo sapiens GN=SET PE=1 SV=3       47   1e-04
sp|Q69ZB3|TSYL5_MOUSE Testis-specific Y-encoded-like protein 5 O...    45   5e-04
sp|Q9H489|TSYL3_HUMAN Testis-specific Y-encoded-like protein 3 O...    45   5e-04
sp|Q8N831|TSYL6_HUMAN Testis-specific Y-encoded-like protein 6 O...    44   6e-04
sp|Q9UJ04|TSYL4_HUMAN Testis-specific Y-encoded-like protein 4 O...    42   0.002
sp|Q86VY4|TSYL5_HUMAN Testis-specific Y-encoded-like protein 5 O...    42   0.004
sp|Q7TQI8|TSYL2_MOUSE Testis-specific Y-encoded-like protein 2 O...    41   0.005
sp|Q18240|SPR2_CAEEL Suppressor of presenilin-2 OS=Caenorhabditi...    41   0.007
sp|Q9BE64|TSYL2_MACFA Testis-specific Y-encoded-like protein 2 O...    40   0.009
sp|Q9H2G4|TSYL2_HUMAN Testis-specific Y-encoded-like protein 2 O...    40   0.009
sp|Q8VD63|TSYL4_MOUSE Testis-specific Y-encoded-like protein 4 O...    39   0.019
sp|P13825|ASP_PLAFS Aspartic acid-rich protein OS=Plasmodium fal...    36   0.21 
sp|A6NKD2|TSPY2_HUMAN Testis-specific Y-encoded protein 2 OS=Hom...    35   0.28 
sp|Q01534|TSPY1_HUMAN Testis-specific Y-encoded protein 1 OS=Hom...    35   0.28 
sp|O19110|TSPY1_BOVIN Testis-specific Y-encoded protein 1 OS=Bos...    35   0.36 
sp|Q9R1M3|TSPY1_RAT Testis-specific Y-encoded protein 1 OS=Rattu...    33   1.0  
sp|Q9HGN2|YO48_SCHPO Putative nucleosome assembly protein C36B7....    31   6.8  

>sp|P53997|SET_DROME Protein SET OS=Drosophila melanogaster GN=Set
           PE=1 SV=2
          Length = 269

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
 Frame = +2

Query: 14  VMEKP-GNKRPPPDE--SFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYF 169
           ++ KP GNK+    E  +FF WF+     D++  VNDE+A++IK+DLWPNPL+Y+
Sbjct: 177 LLTKPYGNKKKRNSEYKTFFDWFS-----DNTDPVNDEIAELIKDDLWPNPLQYY 226


>sp|Q5R5G8|TSYL1_PONAB Testis-specific Y-encoded-like protein 1
           OS=Pongo abelii GN=TSPYL1 PE=2 SV=1
          Length = 438

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = +2

Query: 56  SFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYF 169
           SFF WF+     D S+  +D++A+IIKEDLWPNPL+Y+
Sbjct: 377 SFFTWFS-----DHSLPESDKIAEIIKEDLWPNPLQYY 409


>sp|Q9H0U9|TSYL1_HUMAN Testis-specific Y-encoded-like protein 1
           OS=Homo sapiens GN=TSPYL1 PE=1 SV=3
          Length = 437

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 29/38 (76%)
 Frame = +2

Query: 56  SFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYF 169
           SFF WF+     D S+  +D++A+IIKEDLWPNPL+Y+
Sbjct: 376 SFFTWFS-----DHSLPESDKIAEIIKEDLWPNPLQYY 408


>sp|O88852|TSYL1_MOUSE Testis-specific Y-encoded-like protein 1
           OS=Mus musculus GN=Tspyl1 PE=2 SV=1
          Length = 379

 Score = 48.1 bits (113), Expect = 4e-05
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = +2

Query: 56  SFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYF 169
           SFF WF+     D S+  +D +A+IIKEDLWPNPL+Y+
Sbjct: 318 SFFTWFS-----DHSLPESDRIAEIIKEDLWPNPLQYY 350


>sp|Q0P5N2|TSYL1_BOVIN Testis-specific Y-encoded-like protein 1
           OS=Bos taurus GN=TSPYL1 PE=2 SV=1
          Length = 432

 Score = 47.0 bits (110), Expect = 9e-05
 Identities = 20/38 (52%), Positives = 28/38 (73%)
 Frame = +2

Query: 56  SFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYF 169
           +FF WF+     D S+  +D +A+IIKEDLWPNPL+Y+
Sbjct: 371 NFFTWFS-----DHSLPESDRIAEIIKEDLWPNPLQYY 403


>sp|Q63945|SET_RAT Protein SET OS=Rattus norvegicus GN=Set PE=1 SV=2
          Length = 289

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = +2

Query: 53  ESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYF 169
           ESFF WFT     D S    DE+ ++IK+D+WPNPL+Y+
Sbjct: 199 ESFFTWFT-----DHSDAGADELGEVIKDDIWPNPLQYY 232


>sp|Q9EQU5|SET_MOUSE Protein SET OS=Mus musculus GN=Set PE=1 SV=1
          Length = 289

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = +2

Query: 53  ESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYF 169
           ESFF WFT     D S    DE+ ++IK+D+WPNPL+Y+
Sbjct: 199 ESFFTWFT-----DHSDAGADELGEVIKDDIWPNPLQYY 232


>sp|Q01105|SET_HUMAN Protein SET OS=Homo sapiens GN=SET PE=1 SV=3
          Length = 290

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = +2

Query: 53  ESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYF 169
           ESFF WFT     D S    DE+ ++IK+D+WPNPL+Y+
Sbjct: 200 ESFFTWFT-----DHSDAGADELGEVIKDDIWPNPLQYY 233


>sp|Q69ZB3|TSYL5_MOUSE Testis-specific Y-encoded-like protein 5
           OS=Mus musculus GN=Tspyl5 PE=2 SV=2
          Length = 406

 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = +2

Query: 17  MEKPGNKRPPPDESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYF 169
           ++    + P  + SFF WF+   + +S     D++ +II EDLWPNPL+Y+
Sbjct: 330 LQSLSKENPENNGSFFGWFSNHSSIES-----DKIVEIINEDLWPNPLQYY 375


>sp|Q9H489|TSYL3_HUMAN Testis-specific Y-encoded-like protein 3
           OS=Homo sapiens GN=TSPYL3 PE=2 SV=1
          Length = 355

 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +2

Query: 56  SFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYF 169
           SFF WF++    ++     D VA IIK+DLWPNPL+Y+
Sbjct: 293 SFFSWFSQHSLPEA-----DRVAQIIKDDLWPNPLQYY 325
tr_hit_id Q69JW2
Definition tr|Q69JW2|Q69JW2_ORYSJ Os02g0576700 protein OS=Oryza sativa subsp. japonica
Align length 56
Score (bit) 84.7
E-value 5.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950669|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_E21, 5'
         (668 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q69JW2|Q69JW2_ORYSJ Os02g0576700 protein OS=Oryza sativa subs...    85   5e-15
tr|B8AEC1|B8AEC1_ORYSI Putative uncharacterized protein OS=Oryza...    85   5e-15
tr|A6N1K0|A6N1K0_ORYSI Nucleosome chromatin assembly protein (Fr...    85   5e-15
tr|A7PMT4|A7PMT4_VITVI Chromosome chr14 scaffold_21, whole genom...    84   1e-14
tr|Q94F78|Q94F78_MAIZE Nucleosome/chromatin assembly factor A (P...    82   4e-14
tr|A9NK77|A9NK77_PICSI Putative uncharacterized protein OS=Picea...    81   7e-14
tr|Q94F79|Q94F79_MAIZE Nucleosome/chromatin assembly factor A (P...    80   9e-14
tr|A9RDJ7|A9RDJ7_PHYPA Nucleosome assembly protein family OS=Phy...    79   2e-13
tr|Q9M9V0|Q9M9V0_ARATH F6A14.10 protein OS=Arabidopsis thaliana ...    74   8e-12
tr|B7FJS4|B7FJS4_MEDTR Putative uncharacterized protein OS=Medic...    74   8e-12
tr|B7FJ98|B7FJ98_MEDTR Putative uncharacterized protein OS=Medic...    74   8e-12
tr|Q9CA59|Q9CA59_ARATH Putative SET protein, phospatase 2A inhib...    74   1e-11
tr|Q7X7C9|Q7X7C9_ORYSJ Os04g0459700 protein OS=Oryza sativa subs...    70   1e-10
tr|Q01IJ4|Q01IJ4_ORYSA H0219H12.3 protein (OSIGBa0097P08.8 prote...    70   1e-10
tr|A3AUI0|A3AUI0_ORYSJ Putative uncharacterized protein OS=Oryza...    70   1e-10
tr|A2XU85|A2XU85_ORYSI Putative uncharacterized protein OS=Oryza...    70   1e-10
tr|Q8LC68|Q8LC68_ARATH Putative SET protein, phospatase 2A inhib...    69   2e-10
tr|Q8GXV1|Q8GXV1_ARATH Putative uncharacterized protein At1g1880...    69   2e-10
tr|Q2V4C7|Q2V4C7_ARATH Uncharacterized protein At1g74560.2 OS=Ar...    69   3e-10
tr|A5C155|A5C155_VITVI Putative uncharacterized protein OS=Vitis...    68   5e-10
tr|A8MSD9|A8MSD9_ARATH Uncharacterized protein At1g74560.3 OS=Ar...    58   5e-07
tr|Q540W9|Q540W9_DROME LD23703p (CG4299 protein) OS=Drosophila m...    52   3e-05
tr|Q294B8|Q294B8_DROPS GA18091 OS=Drosophila pseudoobscura pseud...    52   3e-05
tr|B4PS66|B4PS66_DROYA GE24285 OS=Drosophila yakuba GN=GE24285 P...    52   3e-05
tr|B4JGC4|B4JGC4_DROGR GH18852 OS=Drosophila grimshawi GN=GH1885...    52   3e-05
tr|B4HDZ4|B4HDZ4_DROSE GM24211 OS=Drosophila sechellia GN=GM2421...    52   3e-05
tr|B4GLB0|B4GLB0_DROPE GL12537 OS=Drosophila persimilis GN=GL125...    52   3e-05
tr|B3P0T1|B3P0T1_DROER GG16903 OS=Drosophila erecta GN=GG16903 P...    52   3e-05
tr|A0AP03|A0AP03_DROSI CG4299 protein (GD19001) OS=Drosophila si...    52   3e-05
tr|A7RW70|A7RW70_NEMVE Predicted protein OS=Nematostella vectens...    52   4e-05

>tr|Q69JW2|Q69JW2_ORYSJ Os02g0576700 protein OS=Oryza sativa subsp.
           japonica GN=B1342F01.10 PE=2 SV=1
          Length = 252

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = +2

Query: 8   NGVMEKPGNKRPPPDESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYFNN 175
           NG  +K G+KRP  +ESFF WFT+T+ K  + GV DEVA+IIKEDLWPNPLKYFNN
Sbjct: 170 NGNAKKKGSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYFNN 225


>tr|B8AEC1|B8AEC1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07785 PE=4 SV=1
          Length = 252

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = +2

Query: 8   NGVMEKPGNKRPPPDESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYFNN 175
           NG  +K G+KRP  +ESFF WFT+T+ K  + GV DEVA+IIKEDLWPNPLKYFNN
Sbjct: 170 NGNAKKKGSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYFNN 225


>tr|A6N1K0|A6N1K0_ORYSI Nucleosome chromatin assembly protein
           (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1
          Length = 243

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = +2

Query: 8   NGVMEKPGNKRPPPDESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYFNN 175
           NG  +K G+KRP  +ESFF WFT+T+ K  + GV DEVA+IIKEDLWPNPLKYFNN
Sbjct: 170 NGNAKKKGSKRPLVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYFNN 225


>tr|A7PMT4|A7PMT4_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020937001
           PE=3 SV=1
          Length = 255

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 38/57 (66%), Positives = 43/57 (75%)
 Frame = +2

Query: 5   TNGVMEKPGNKRPPPDESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYFNN 175
           +NGV     NKRP  +ESFF WF+ET  KD   G+ DEVA+IIKEDLWPNPLKYFNN
Sbjct: 166 SNGVNHDKKNKRPFAEESFFAWFSETQQKDIMEGLQDEVAEIIKEDLWPNPLKYFNN 222


>tr|Q94F78|Q94F78_MAIZE Nucleosome/chromatin assembly factor A
           (Putative uncharacterized protein) OS=Zea mays GN=nfa104
           PE=2 SV=1
          Length = 258

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = +2

Query: 8   NGVMEKPGNKRPPPDESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYFNN 175
           NG+ +K GNKRP   ESFF WF++T+ K  + GV DEVA+IIKEDLWPNPLKYFNN
Sbjct: 169 NGINKK-GNKRPLVVESFFSWFSDTELKSLADGVQDEVAEIIKEDLWPNPLKYFNN 223


>tr|A9NK77|A9NK77_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 257

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 39/58 (67%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = +2

Query: 5   TNGVM-EKPGNKRPPPDESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYFNN 175
           TNG+  EK GNKR   +ESFF WF+ET  KD+  G++DEVA+IIKEDLWPNPLKYFN+
Sbjct: 158 TNGISPEKEGNKRSYQEESFFTWFSETQ-KDTPDGIHDEVAEIIKEDLWPNPLKYFNS 214


>tr|Q94F79|Q94F79_MAIZE Nucleosome/chromatin assembly factor A
           (Putative uncharacterized protein) OS=Zea mays GN=nfa103
           PE=2 SV=1
          Length = 251

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 37/56 (66%), Positives = 45/56 (80%)
 Frame = +2

Query: 8   NGVMEKPGNKRPPPDESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYFNN 175
           NG+ +K G+KRP  +ESFF WF +T+ K  + GV DEVA+IIKEDLWPNPLKYFNN
Sbjct: 169 NGINKK-GSKRPLVEESFFSWFGDTELKSLADGVQDEVAEIIKEDLWPNPLKYFNN 223


>tr|A9RDJ7|A9RDJ7_PHYPA Nucleosome assembly protein family
           OS=Physcomitrella patens subsp. patens GN=NFA1503 PE=3
           SV=1
          Length = 230

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 38/58 (65%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = +2

Query: 5   TNGVM-EKPGNKRPPPDESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYFNN 175
           TNGV+ EK GNKR     SFFKWF++T  K S  G+ DEVA++IK+DLWPNPLKYFNN
Sbjct: 160 TNGVVAEKEGNKRAGMLCSFFKWFSDTQQKISIEGIQDEVAEVIKDDLWPNPLKYFNN 217


>tr|Q9M9V0|Q9M9V0_ARATH F6A14.10 protein OS=Arabidopsis thaliana
           GN=F6A14.10 PE=3 SV=1
          Length = 255

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 38/58 (65%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
 Frame = +2

Query: 8   NGVM-EKPGNKRPPPDESFFKWFTETDAK-DSSVGVNDEVADIIKEDLWPNPLKYFNN 175
           NGV  EK GNKR  P+ESFF WF++   K D    + DEVADIIKEDLWPNPL YFNN
Sbjct: 163 NGVNHEKNGNKRALPEESFFTWFSDAQHKEDVEDEMQDEVADIIKEDLWPNPLTYFNN 220


>tr|B7FJS4|B7FJS4_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 260

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = +2

Query: 8   NGVM-EKPGNKRPPPDESFFKWFTETDAKDSSVGVNDEVADIIKEDLWPNPLKYFNN 175
           NGV  EK GNKR   D SFF WF +T+ KD    ++DE+A++IK+DLWPNPL YFN+
Sbjct: 165 NGVSHEKKGNKRAASDISFFTWFCDTEQKDEMGDIHDEIAEMIKDDLWPNPLNYFNS 221