DK950681
Clone id TST38A01NGRL0009_F09
Library
Length 606
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_F09. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
ATTTCATACCCATTGTGATGCGTGTCAGAGCCAGTGATGCGCACATGATGGGGTCTCCAA
AGGCAGACATCATGTTCTCAAGAGATAATGATGCTGTATGGTTGAAGCTTCGAAATATTC
CAGCAAGCCTTCTGAAGGAATTCAGTGGACTCCTTCCTGCACAAGATGCCAAGTGTAAAA
GAGTCAAAGATGATTTGTATTCGACAGTATCAGTTGAGTCAGCACTTGAACGATACCGGA
CTGCAGTGCTGAGTGCGTCTAGCAGGGTATATGAAATTTTTAGGAATCTAGCTGAAGAAT
TGAAAGGGAGATTGAACACTATCGTGTTTACTTCTGTATTGGCAGTTATTGCAAAGACTC
TTTTTGCTCATGTGAGCCCCGCGACACGTAGGGACTGGACTTTTCCAGAAAAAGTAAATG
ATGATGATGAAGAACTATTGACACATGACGCANAAGATGGAACTTATGACAGCAACCCTG
CGATGGTGGTTCCAAGGAGGAAAGATAAGCTGGTGATGGAAGATCTGATACCATATTGGG
CAGACAAGGCAAATAGCGTAGTGGTGTCCAACTCTGTAAGAATGAGCTCACTGCATCTTC
TTACTG
■■Homology search results ■■ -
sp_hit_id Q8RFK2
Definition sp|Q8RFK2|MUTS_FUSNN DNA mismatch repair protein mutS OS=Fusobacterium nucleatum subsp. nucleatum
Align length 74
Score (bit) 33.5
E-value 0.81
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950681|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_F09, 5'
(587 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8RFK2|MUTS_FUSNN DNA mismatch repair protein mutS OS=Fusobac... 33 0.81
sp|Q8JGM4|QSOX1_CHICK Sulfhydryl oxidase 1 OS=Gallus gallus GN=Q... 33 1.1
sp|P17930|VP87_NPVOP Capsid protein p87 OS=Orgyia pseudotsugata ... 33 1.4
sp|Q7N2I1|ACKA_PHOLL Acetate kinase OS=Photorhabdus luminescens ... 32 2.3
sp|P46605|HOX1A_MAIZE Homeobox protein HOX1A OS=Zea mays GN=HOX1... 32 3.1
sp|A3DDI3|MUTS_CLOTH DNA mismatch repair protein mutS OS=Clostri... 31 5.2
sp|Q31E77|GPMI_THICR 2,3-bisphosphoglycerate-independent phospho... 31 5.2
sp|Q65TL9|MUKB_MANSM Chromosome partition protein mukB OS=Mannhe... 30 6.8
sp|A1KV25|GPMA_NEIMF 2,3-bisphosphoglycerate-dependent phosphogl... 30 8.9
sp|Q9JYF7|GPMA_NEIMB 2,3-bisphosphoglycerate-dependent phosphogl... 30 8.9
sp|A9M1A2|GPMA_NEIM0 2,3-bisphosphoglycerate-dependent phosphogl... 30 8.9
sp|P56959|FUS_MOUSE RNA-binding protein FUS OS=Mus musculus GN=F... 30 8.9
sp|P35637|FUS_HUMAN RNA-binding protein FUS OS=Homo sapiens GN=F... 30 8.9
sp|Q28009|FUS_BOVIN RNA-binding protein FUS OS=Bos taurus GN=FUS... 30 8.9
sp|Q2NSJ4|ACKA_SODGM Acetate kinase OS=Sodalis glossinidius (str... 30 8.9

>sp|Q8RFK2|MUTS_FUSNN DNA mismatch repair protein mutS
OS=Fusobacterium nucleatum subsp. nucleatum GN=mutS PE=3
SV=1
Length = 896

Score = 33.5 bits (75), Expect = 0.81
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Frame = +3

Query: 225 LERYRTAVLSASSRV----YEIFRNLAEELKGRLNTI--VFTSVLAVIAKTLFAHVSPAT 386
L+ Y V++A S++ YE+F+ L E+KG ++++ + + + + FAH+ AT
Sbjct: 529 LKEYEEKVITAKSKIEALEYELFKQLTSEIKGHIDSLYKLANRIANLDIVSNFAHI--AT 586

Query: 387 RRDWTFPEKVNDDD 428
+ + PE + D D
Sbjct: 587 KNSYVKPE-IGDGD 599


>sp|Q8JGM4|QSOX1_CHICK Sulfhydryl oxidase 1 OS=Gallus gallus
GN=QSOX1 PE=1 SV=1
Length = 743

Score = 33.1 bits (74), Expect = 1.1
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 4/131 (3%)
Frame = +3

Query: 114 NIPASLLKEFSGLLPAQDAKCKRVKDDLYSTVSVESALERYRTAVLS----ASSRVYEIF 281
N+ S + E L PAQ + K DL STV +E R AVL+ A+ + Y
Sbjct: 288 NVTGSAINETRALQPAQADRSKVYVADLESTVHYTLRVEAGRPAVLAGAQLAALKCY--V 345

Query: 282 RNLAEELKGRLNTIVFTSVLAVIAKTLFAHVSPATRRDWTFPEKVNDDDEELLTHDAXDG 461
LA+ GR + F L + R+WT PE +E A
Sbjct: 346 ATLAKYFPGRPSVQTFLQSL------------DSWLRNWTEPELPRSALKE-----AVKN 388

Query: 462 TYDSNPAMVVP 494
D++PA V+P
Sbjct: 389 KEDASPAAVLP 399


>sp|P17930|VP87_NPVOP Capsid protein p87 OS=Orgyia pseudotsugata
multicapsid polyhedrosis virus GN=P87 PE=4 SV=1
Length = 624

Score = 32.7 bits (73), Expect = 1.4
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +3

Query: 177 KRVKDDLYSTVSVESALERYRTAVLS-ASSRVYEIFRNLAEELKGRLNTIVFTSVL---- 341
KRVK + + +E AL Y TA S AS V + F AE L L I + +L
Sbjct: 121 KRVKANATTLAQIEEALRNYETAKNSGASDSVIDGFLERAESLFNTLKNISLSELLDRES 180

Query: 342 AVIAKTLFAHVSPATRRDWTFPEKVNDDDEELL 440
AV A T +P T+ P V++ D + L
Sbjct: 181 AVFADT---ESAPRTQTADNSPPPVSEQDFDRL 210


>sp|Q7N2I1|ACKA_PHOLL Acetate kinase OS=Photorhabdus luminescens
subsp. laumondii GN=ackA PE=3 SV=1
Length = 400

Score = 32.0 bits (71), Expect = 2.3
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
Frame = +3

Query: 45 MMGSPKADI---MFSRDNDAVWLKLRNIPASLLKEFSGLLPAQD--AKCKRVKDDLYSTV 209
+MG+ DI + +D++ + + I L KE SGLL + + C+ ++D+ +
Sbjct: 239 VMGTRSGDIDPAIIFHLHDSLGMSVEQINKLLTKE-SGLLGLTEVTSDCRYIEDNYATKA 297

Query: 210 SVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSVLAVIAKTLFAHVSPATR 389
+ A++ Y R+ + + ++GRL+ I+FT + + A V
Sbjct: 298 DAKRAMDVY-------CHRLAKYVGAYSALMEGRLDAIIFTGGIGENS----ALVREQVM 346

Query: 390 RDWTFPEKVNDDDEELLTHDAXDG---TYDSNPAMVVPRRKDKLVMED 524
+ D D L G T +S PA+V+P ++ ++ +D
Sbjct: 347 KKLALLGFEYDHDRNLAARFGKSGAITTDNSRPALVIPTNEELVIAQD 394


>sp|P46605|HOX1A_MAIZE Homeobox protein HOX1A OS=Zea mays GN=HOX1A
PE=2 SV=1
Length = 719

Score = 31.6 bits (70), Expect = 3.1
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3

Query: 186 KDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEEL-KGRLNTIVFTSVLAVIAKTL 362
K+ + E LER ++ +L R+ E+FRN+ L KG+++ +F S + + +
Sbjct: 151 KNQSLDKIRPEKELERAKSEILRCKLRIREVFRNIDSLLSKGKIDETLFDSEGEISCEDI 210

Query: 363 F 365
F
Sbjct: 211 F 211


>sp|A3DDI3|MUTS_CLOTH DNA mismatch repair protein mutS
OS=Clostridium thermocellum (strain ATCC 27405 / DSM
1237) GN=mutS PE=3 SV=1
Length = 870

Score = 30.8 bits (68), Expect = 5.2
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 12/122 (9%)
Frame = +3

Query: 108 LRNIPASLLKEFSGLLPAQDAKCKRVKDDLYSTVSVESALERYRT--------AVLSASS 263
++N+ K F + + +V DD Y + ERY T VL A
Sbjct: 464 IKNLKVGFNKVFGYYIEVTKSYYSQVPDD-YIRKQTLANCERYITPELKEIENTVLGAED 522

Query: 264 RV----YEIFRNLAEELKGRLNTIVFTSVLAVIAKTLFAHVSPATRRDWTFPEKVNDDDE 431
R+ Y+IF ++ ++ +N + T+ L + A R +T PE +DD
Sbjct: 523 RLVELEYQIFVDVRNKVAKEINRLKTTARSLARIDVLCSLAEVADRESYTMPEVTDDDKI 582

Query: 432 EL 437
E+
Sbjct: 583 EI 584


>sp|Q31E77|GPMI_THICR 2,3-bisphosphoglycerate-independent
phosphoglycerate mutase OS=Thiomicrospira crunogena
(strain XCL-2) GN=gpmI PE=3 SV=1
Length = 521

Score = 30.8 bits (68), Expect = 5.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3

Query: 408 EKVNDDDEELLTHDAXDGTYDSNPAMVVPRRKDKLV 515
E+ ND++ +L + TYD P M +P K+KL+
Sbjct: 356 EEPNDNEVRILINSPQVATYDLQPEMSLPELKEKLI 391


>sp|Q65TL9|MUKB_MANSM Chromosome partition protein mukB OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=mukB PE=3 SV=1
Length = 1499

Score = 30.4 bits (67), Expect = 6.8
Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Frame = +3

Query: 84 DNDAVWLKLRNIPASLLKEFSGLLPAQDAKCKRVKDDLYSTVSVESALER---------Y 236
+ D ++++ + S L+ + L + +R+KDDLY + ++ ++ +
Sbjct: 936 EQDEIFIRQHGMTLSQLEPIANTLQSDPENYERLKDDLYQAIDMQKQAQQKAFALADVIH 995

Query: 237 RTAVLSASSRVYEIFRNLAEELKGRLNTI 323
R A S V +L E+L+ RL +
Sbjct: 996 RQAHFSYEDTVKTETNDLNEKLRVRLEQV 1024


>sp|A1KV25|GPMA_NEIMF 2,3-bisphosphoglycerate-dependent
phosphoglycerate mutase OS=Neisseria meningitidis
serogroup C / serotype 2a (strain ATCC 700532 / FAM18)
GN=gpmA PE=3 SV=1
Length = 227

Score = 30.0 bits (66), Expect = 8.9
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3

Query: 387 RRDWTFPEKVNDDDEELLTHDAXDGTYDSNPAMVVPRRKD-KLVMEDLIPYWADK 548
RR + + D D+E H D Y PA VVP ++ K+ +E ++P+W D+
Sbjct: 113 RRSYDTLPPLLDKDDEFSAHK--DRRYAHLPADVVPDGENLKVTLERVLPFWEDQ 165


>sp|Q9JYF7|GPMA_NEIMB 2,3-bisphosphoglycerate-dependent
phosphoglycerate mutase OS=Neisseria meningitidis
serogroup B GN=gpmA PE=3 SV=1
Length = 227

Score = 30.0 bits (66), Expect = 8.9
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3

Query: 387 RRDWTFPEKVNDDDEELLTHDAXDGTYDSNPAMVVPRRKD-KLVMEDLIPYWADK 548
RR + + D D+E H D Y PA VVP ++ K+ +E ++P+W D+
Sbjct: 113 RRSYDTLPPLLDKDDEFSAHK--DRRYAHLPADVVPDGENLKVTLERVLPFWEDQ 165


tr_hit_id Q1XBQ6
Definition tr|Q1XBQ6|Q1XBQ6_SOLLC DNA mismatch repair protein (Fragment) OS=Solanum lycopersicum
Align length 189
Score (bit) 111.0
E-value 3.0e-23
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950681|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_F09, 5'
(587 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1XBQ6|Q1XBQ6_SOLLC DNA mismatch repair protein (Fragment) OS... 111 3e-23
tr|A7NXJ8|A7NXJ8_VITVI Chromosome chr5 scaffold_2, whole genome ... 108 3e-22
tr|Q1XBQ8|Q1XBQ8_SOYBN DNA mismatch repair protein OS=Glycine ma... 106 1e-21
tr|Q2TMH4|Q2TMH4_PHAVU DNA mismatch repair protein OS=Phaseolus ... 105 2e-21
tr|Q1WK36|Q1WK36_PHAVU DNA mismatch repair protein OS=Phaseolus ... 105 2e-21
tr|Q9LK12|Q9LK12_ARATH Similarity to mismatch repair protein Mut... 103 9e-21
tr|Q84LK0|Q84LK0_ARATH DNA mismatch repair protein OS=Arabidopsi... 103 9e-21
tr|A9TFV9|A9TFV9_PHYPA Predicted protein OS=Physcomitrella paten... 102 2e-20
tr|Q7X8P0|Q7X8P0_ORYSJ OSJNBa0043L24.4 protein OS=Oryza sativa s... 98 4e-19
tr|Q7F953|Q7F953_ORYSA OSJNBb0002J11.12 protein OS=Oryza sativa ... 98 4e-19
tr|Q0JBW2|Q0JBW2_ORYSJ Os04g0507000 protein OS=Oryza sativa subs... 98 4e-19
tr|A3AVE7|A3AVE7_ORYSJ Putative uncharacterized protein OS=Oryza... 98 4e-19
tr|Q1XBQ7|Q1XBQ7_MAIZE DNA mismatch repair protein OS=Zea mays G... 96 2e-18
tr|Q01IV6|Q01IV6_ORYSA OSIGBa0157A06.3 protein OS=Oryza sativa G... 93 1e-17
tr|B3U2A3|B3U2A3_CUCSA DNA mismatch repair protein OS=Cucumis sa... 80 1e-13
tr|B8ARR0|B8ARR0_ORYSI Putative uncharacterized protein OS=Oryza... 78 4e-13
tr|Q01C10|Q01C10_OSTTA DNA mismatch repair MutS family (ISS) OS=... 64 5e-09
tr|A4RV40|A4RV40_OSTLU Predicted protein OS=Ostreococcus lucimar... 57 8e-07
tr|Q8H991|Q8H991_ORYSJ Os06g0229300 protein OS=Oryza sativa subs... 37 1.1
tr|Q8H990|Q8H990_ORYSJ PHD-finger family homeodomain protein (Fr... 37 1.1
tr|B8B494|B8B494_ORYSI Putative uncharacterized protein OS=Oryza... 37 1.1
tr|A3BST4|A3BST4_ORYSJ Putative uncharacterized protein OS=Oryza... 37 1.1
tr|A7AS93|A7AS93_BABBO DNA mismatch repair protein, putative OS=... 37 1.1
tr|B4PK90|B4PK90_DROYA GE19880 OS=Drosophila yakuba GN=GE19880 P... 36 1.4
tr|A9WUX1|A9WUX1_RENSM Membrane alanine aminopeptidase OS=Reniba... 35 4.1
tr|B7ZZX5|B7ZZX5_MAIZE Putative uncharacterized protein OS=Zea m... 34 7.0
tr|Q8I1I1|Q8I1I1_DROER CG9715-PA (Fragment) OS=Drosophila erecta... 34 7.0
tr|A6X5A1|A6X5A1_OCHA4 ABC transporter related OS=Ochrobactrum a... 33 9.1
tr|Q8IK84|Q8IK84_PLAF7 Putative uncharacterized protein OS=Plasm... 33 9.1
tr|Q6BNK1|Q6BNK1_DEBHA DEHA2E21054p OS=Debaryomyces hansenii GN=... 33 9.1

>tr|Q1XBQ6|Q1XBQ6_SOLLC DNA mismatch repair protein (Fragment)
OS=Solanum lycopersicum GN=MSH1 PE=2 SV=1
Length = 1124

Score = 111 bits (278), Expect = 3e-23
Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 6/189 (3%)
Frame = +3

Query: 3 FIPIVMRVRASDAHMMGSPKADIMFSRDNDAVWLKLRNIPASLLKEFSG------LLPAQ 164
F+PI+ R+RA+ A + G K +I+++R++ AVW K + ++ +G L PA
Sbjct: 571 FLPIISRIRATMAPL-GGTKGEILYAREHGAVWFKGKRFVPTVWAGTAGEEQIKQLRPAL 629

Query: 165 DAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSVLA 344
D+K K+V ++ ++T+ VE A+ RY A A SRV E+ R L+ EL ++N ++F SVL
Sbjct: 630 DSKGKKVGEEWFTTMRVEDAIARYHEASAKAKSRVLELLRGLSSELLSKINILIFASVLN 689

Query: 345 VIAKTLFAHVSPATRRDWTFPEKVNDDDEELLTHDAXDGTYDSNPAMVVPRRKDKLVMED 524
VIAK+LF+HVS RR+W FP + + +A +GT D + +
Sbjct: 690 VIAKSLFSHVSEGRRRNWIFPTITQFN--KCQDTEALNGT-------------DGMKIIG 734

Query: 525 LIPYWADKA 551
L PYW D A
Sbjct: 735 LSPYWFDAA 743


>tr|A7NXJ8|A7NXJ8_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020365001
PE=3 SV=1
Length = 1122

Score = 108 bits (269), Expect = 3e-22
Identities = 59/144 (40%), Positives = 91/144 (63%), Gaps = 6/144 (4%)
Frame = +3

Query: 3 FIPIVMRVRASDAHMMGSPKADIMFSRDNDAVWLK-LRNIPASLL-----KEFSGLLPAQ 164
F+PI+ R++A+ A + G PK +++++R+++AVW K R P + ++ L PA
Sbjct: 576 FLPIISRIKATTAPL-GGPKGEVVYAREHEAVWFKGKRFAPVAWAGTPGEEQIKQLRPAI 634

Query: 165 DAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSVLA 344
D+K ++V + ++TV VE AL RY A A +RV E+ R L+ EL+ ++N ++F S+L
Sbjct: 635 DSKGRKVGLEWFTTVKVEDALTRYHEAGDKAKARVLELLRGLSAELQTKINILIFASMLL 694

Query: 345 VIAKTLFAHVSPATRRDWTFPEKV 416
VIAK LFAHVS RR W FP V
Sbjct: 695 VIAKALFAHVSEGRRRKWVFPSLV 718


>tr|Q1XBQ8|Q1XBQ8_SOYBN DNA mismatch repair protein OS=Glycine max
GN=MSH1 PE=2 SV=1
Length = 1130

Score = 106 bits (264), Expect = 1e-21
Identities = 66/186 (35%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
Frame = +3

Query: 3 FIPIVMRVRASDAHMMGSPKADIMFSRDNDAVWLKLRNIPASLL------KEFSGLLPAQ 164
F+P+V R++A A + G PK +I ++R+ +AVW K + +L ++ L A
Sbjct: 578 FVPVVSRIKAIVAPL-GGPKGEISYAREQEAVWFKGKRFTPNLWAGSPGEEQIKQLRHAL 636

Query: 165 DAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSVLA 344
D+K ++V ++ ++T VE+AL RY A A RV EI R LA EL+ +N +VF+S+L
Sbjct: 637 DSKGRKVGEEWFTTPKVEAALTRYHEANAKAKERVLEILRGLAAELQYSINILVFSSMLL 696

Query: 345 VIAKTLFAHVSPATRRDWTFPEKVNDDD-EELLTHDAXDGTYDSNPAMVVPRRKDKLVME 521
VIAK LFAH S RR W FP V E++ + D G + +
Sbjct: 697 VIAKALFAHASEGRRRRWVFPTLVESHGFEDVKSLDKTHG----------------MKIS 740

Query: 522 DLIPYW 539
L+PYW
Sbjct: 741 GLLPYW 746


>tr|Q2TMH4|Q2TMH4_PHAVU DNA mismatch repair protein OS=Phaseolus
vulgaris PE=2 SV=1
Length = 1126

Score = 105 bits (262), Expect = 2e-21
Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Frame = +3

Query: 3 FIPIVMRVRASDAHMMGSPKADIMFSRDNDAVWLKLRNIPASLLKEFSG------LLPAQ 164
F+P+V RV+A+ A + G P+ +I ++R+++AVW + + SL G L A
Sbjct: 579 FVPVVSRVKATIAPL-GGPRGEISYAREHEAVWFRGKRFTPSLWSGSPGEEQIKQLRHAL 637

Query: 165 DAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSVLA 344
D+K KRV ++ ++T VE+AL RY A A+ RV EI R LA EL +N +VF+S L
Sbjct: 638 DSKGKRVGEEWFTTPKVEAALTRYHEANAKATERVLEILRELATELHYSINILVFSSTLL 697

Query: 345 VIAKTLFAHVSPATRRDWTFP 407
VI K LFAH S RR W FP
Sbjct: 698 VITKALFAHASEGRRRRWVFP 718


>tr|Q1WK36|Q1WK36_PHAVU DNA mismatch repair protein OS=Phaseolus
vulgaris GN=Msh1 PE=3 SV=1
Length = 1126

Score = 105 bits (262), Expect = 2e-21
Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Frame = +3

Query: 3 FIPIVMRVRASDAHMMGSPKADIMFSRDNDAVWLKLRNIPASLLKEFSG------LLPAQ 164
F+P+V RV+A+ A + G P+ +I ++R+++AVW + + SL G L A
Sbjct: 579 FVPVVSRVKATIAPL-GGPRGEISYAREHEAVWFRGKRFTPSLWSGSPGEEQIKQLRHAL 637

Query: 165 DAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSVLA 344
D+K KRV ++ ++T VE+AL RY A A+ RV EI R LA EL +N +VF+S L
Sbjct: 638 DSKGKRVGEEWFTTPKVEAALTRYHEANAKATERVLEILRGLATELHYSINILVFSSTLL 697

Query: 345 VIAKTLFAHVSPATRRDWTFP 407
VI K LFAH S RR W FP
Sbjct: 698 VITKALFAHASEGRRRRWVFP 718


>tr|Q9LK12|Q9LK12_ARATH Similarity to mismatch repair protein MutS
OS=Arabidopsis thaliana PE=3 SV=1
Length = 1016

Score = 103 bits (256), Expect = 9e-21
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 6/187 (3%)
Frame = +3

Query: 3 FIPIVMRVRASDAHMMGSPKADIMFSRDNDAVWLKLRNIPASLLKEFSG------LLPAQ 164
F PI+ R++A+ A + G PK +I ++R++++VW K + S+ +G L PA
Sbjct: 475 FHPIISRIKATTASL-GGPKGEIAYAREHESVWFKGKRFTPSIWAGTAGEDQIKQLKPAL 533

Query: 165 DAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSVLA 344
D+K K+V ++ ++T VE AL RY A +A +RV E+ R L+ +L+ ++N +VF S+L
Sbjct: 534 DSKGKKVGEEWFTTPKVEIALVRYHEASENAKARVLELLRELSVKLQTKINVLVFASMLL 593

Query: 345 VIAKTLFAHVSPATRRDWTFPEKVNDDDEELLTHDAXDGTYDSNPAMVVPRRKDKLVMED 524
VI+K LF+H RR W FP V +E + P R K +
Sbjct: 594 VISKALFSHACEGRRRKWVFPTLVGFSLDE-----------GAKPLDGASRMK----LTG 638

Query: 525 LIPYWAD 545
L PYW D
Sbjct: 639 LSPYWFD 645


>tr|Q84LK0|Q84LK0_ARATH DNA mismatch repair protein OS=Arabidopsis
thaliana GN=MSH1 PE=2 SV=1
Length = 1118

Score = 103 bits (256), Expect = 9e-21
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 6/187 (3%)
Frame = +3

Query: 3 FIPIVMRVRASDAHMMGSPKADIMFSRDNDAVWLKLRNIPASLLKEFSG------LLPAQ 164
F PI+ R++A+ A + G PK +I ++R++++VW K + S+ +G L PA
Sbjct: 577 FHPIISRIKATTASL-GGPKGEIAYAREHESVWFKGKRFTPSIWAGTAGEDQIKQLKPAL 635

Query: 165 DAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSVLA 344
D+K K+V ++ ++T VE AL RY A +A +RV E+ R L+ +L+ ++N +VF S+L
Sbjct: 636 DSKGKKVGEEWFTTPKVEIALVRYHEASENAKARVLELLRELSVKLQTKINVLVFASMLL 695

Query: 345 VIAKTLFAHVSPATRRDWTFPEKVNDDDEELLTHDAXDGTYDSNPAMVVPRRKDKLVMED 524
VI+K LF+H RR W FP V +E + P R K +
Sbjct: 696 VISKALFSHACEGRRRKWVFPTLVGFSLDE-----------GAKPLDGASRMK----LTG 740

Query: 525 LIPYWAD 545
L PYW D
Sbjct: 741 LSPYWFD 747


>tr|A9TFV9|A9TFV9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_144992 PE=3 SV=1
Length = 862

Score = 102 bits (254), Expect = 2e-20
Identities = 61/189 (32%), Positives = 103/189 (54%), Gaps = 6/189 (3%)
Frame = +3

Query: 3 FIPIVMRVRASDAHMMGSPKADIMFSRDNDAVWLKLRNIPA------SLLKEFSGLLPAQ 164
F PIV R+ + + K +I +S ++ AVWL+ +NI + SL+ + L+PA
Sbjct: 474 FCPIVSRMEEDNVKGL---KVEICYSYEDQAVWLQGKNIKSLAGADSSLVVALNCLVPAV 530

Query: 165 DAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSVLA 344
DAK K+V ++ ++T VES+L +YR AV A+ R+ E+ R ++E+L+ ++ ++F S L+
Sbjct: 531 DAKGKKVGEEWWTTSKVESSLGKYRAAVDKANVRILELLRAISEDLQPKIEVLIFVSTLS 590

Query: 345 VIAKTLFAHVSPATRRDWTFPEKVNDDDEELLTHDAXDGTYDSNPAMVVPRRKDKLVMED 524
+IAKTL HV+ +RR+W P + + ++V+ D
Sbjct: 591 IIAKTLNLHVTEGSRRNWAVP--------------------------TLSSTERQMVLAD 624

Query: 525 LIPYWADKA 551
L+PYW D A
Sbjct: 625 LVPYWNDLA 633


>tr|Q7X8P0|Q7X8P0_ORYSJ OSJNBa0043L24.4 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0043L24.4 PE=3 SV=1
Length = 1037

Score = 97.8 bits (242), Expect = 4e-19
Identities = 53/143 (37%), Positives = 84/143 (58%), Gaps = 8/143 (5%)
Frame = +3

Query: 3 FIPIVMRVRASDAHMMGSPKADIMFSRDNDAVWLKLR--------NIPASLLKEFSGLLP 158
F+PI+ RV+ S GS K +I +++++++VW K R N P L + L P
Sbjct: 481 FLPIISRVK-SVMSSNGSSKGEISYAKEHESVWFKGRRFTPNVWANTPGEL--QIKQLKP 537

Query: 159 AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 338
A D+K ++V ++ ++T+ VE+AL RY A +A +V E+ R L+ EL+ ++N +VF S
Sbjct: 538 AIDSKGRKVGEEWFTTIKVENALTRYHEACDNAKRKVLELLRGLSSELQDKINVLVFCST 597

Query: 339 LAVIAKTLFAHVSPATRRDWTFP 407
+ +I K LF HVS RR W P
Sbjct: 598 MLIITKALFGHVSEGRRRGWVLP 620


>tr|Q7F953|Q7F953_ORYSA OSJNBb0002J11.12 protein OS=Oryza sativa
GN=OSJNBb0002J11.12 PE=3 SV=1
Length = 785

Score = 97.8 bits (242), Expect = 4e-19
Identities = 53/143 (37%), Positives = 84/143 (58%), Gaps = 8/143 (5%)
Frame = +3

Query: 3 FIPIVMRVRASDAHMMGSPKADIMFSRDNDAVWLKLR--------NIPASLLKEFSGLLP 158
F+PI+ RV+ S GS K +I +++++++VW K R N P L + L P
Sbjct: 229 FLPIISRVK-SVMSSNGSSKGEISYAKEHESVWFKGRRFTPNVWANTPGEL--QIKQLKP 285

Query: 159 AQDAKCKRVKDDLYSTVSVESALERYRTAVLSASSRVYEIFRNLAEELKGRLNTIVFTSV 338
A D+K ++V ++ ++T+ VE+AL RY A +A +V E+ R L+ EL+ ++N +VF S
Sbjct: 286 AIDSKGRKVGEEWFTTIKVENALTRYHEACDNAKRKVLELLRGLSSELQDKINVLVFCST 345

Query: 339 LAVIAKTLFAHVSPATRRDWTFP 407
+ +I K LF HVS RR W P
Sbjct: 346 MLIITKALFGHVSEGRRRGWVLP 368