| DK950685 |
| Clone id |
TST38A01NGRL0009_F13 |
| Library |
TST38 |
| Length |
732 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_F13. 5' end sequence. |
| Accession |
DK950685 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
- |
| Sequence |
GTCGGGAGTGTTCTTCTAAGGCTAGGGTTGCTTCAGTTCCTTTCGCCATCGCTCGTATTC
AAACATGGAAGAAGGAAGGCCAAGGAGGTTAAGGAGGAGAACGTGACAATTAGTGGCCCT
GGTGCCCGAGATGGTGAACATGTTTTTGGAGTCGCTCACATCTTTGCGTCGTTCAATGAT
ACATTTGTGCATGTCACGGATTTGTCTGGAAAGGAGACTCTTGCTCGGGTGACTGGTGGC
ATGAAGGTGAAAGCTGACAGAGATGAGTCTTCCCCTTATGCTGCCATGCTTGCTGCTCAG
GATGTAGCTCAAAAGTGCAAGGAGCTAGGTTTAACCGCTCTTCATATAAAGCTACGAGCA
ACTGGAGGAAACAAGACCAAGACACCTGGTCCAGGTGCCCAGTCAGCAATAAGAGCGCTT
GCGCGCTCAGGGATGCGCATCGGGCGCATTGAGGATGTCACTCCCATACCGACTGATAGC
ACCAGAAGGAAGGGTGGCAGGAGAGGCCGCAGGCTGTGAGTCTTGGTACACGTGGTCTCG
AGAATTTTGTGAGCTCAGCTTTTGTTCTGTTTTGTATTAAGGAGGCTATGGAATAGCAAG
ACCATTTTACAGGGGTCTCTGACCTGCTGAAATTGAAGAGTGTTTAATATTGCGGATACT
TCAAAATGTGTCCGTCAGTTTTTAATTCTATCTAGAAACGAGTTATCGTCAAAAAAAAAA
AAAAAAAAAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P19951 |
| Definition |
sp|P19951|RS142_MAIZE 40S ribosomal protein S14 OS=Zea mays |
| Align length |
139 |
| Score (bit) |
214.0 |
| E-value |
5.0e-55 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TTN2 |
| Definition |
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
139 |
| Score (bit) |
219.0 |
| E-value |
1.0e-55 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950685|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_F13, 5'
(710 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella paten... 219 1e-55
tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, who... 219 1e-55
tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome... 218 2e-55
tr|A7QF89|A7QF89_VITVI Chromosome undetermined scaffold_87, whol... 218 3e-55
tr|A5AX94|A5AX94_VITVI Putative uncharacterized protein OS=Vitis... 218 3e-55
tr|A3ATP4|A3ATP4_ORYSJ Putative uncharacterized protein OS=Oryza... 218 3e-55
tr|B4FKA4|B4FKA4_MAIZE Putative uncharacterized protein OS=Zea m... 217 5e-55
tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella paten... 217 5e-55
tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea... 216 1e-54
tr|B3TM39|B3TM39_ELAGV Ribosomal protein S14 OS=Elaeis guineensi... 216 1e-54
tr|A9PBW7|A9PBW7_POPTR Putative uncharacterized protein OS=Popul... 216 2e-54
tr|Q7XSA6|Q7XSA6_ORYSJ Os02g0534800 protein OS=Oryza sativa subs... 214 4e-54
tr|Q01IS6|Q01IS6_ORYSA OSIGBa0134P10.10 protein (OSIGBa0137L20.1... 214 4e-54
tr|A9PDW2|A9PDW2_POPTR Putative uncharacterized protein OS=Popul... 214 4e-54
tr|A2XT84|A2XT84_ORYSI Putative uncharacterized protein OS=Oryza... 214 4e-54
tr|B4FJ48|B4FJ48_MAIZE Putative uncharacterized protein OS=Zea m... 214 6e-54
tr|B4FBS3|B4FBS3_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 214 6e-54
tr|B6UH09|B6UH09_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 213 8e-54
tr|A9P8E9|A9P8E9_POPTR Putative uncharacterized protein OS=Popul... 213 8e-54
tr|B6T522|B6T522_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 213 1e-53
tr|A9PDF0|A9PDF0_POPTR Putative uncharacterized protein OS=Popul... 213 1e-53
tr|B6T281|B6T281_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 213 1e-53
tr|A9PIB5|A9PIB5_POPTR Putative uncharacterized protein OS=Popul... 212 2e-53
tr|Q6H7T1|Q6H7T1_ORYSJ Os02g0162500 protein OS=Oryza sativa subs... 212 2e-53
tr|B8LKR8|B8LKR8_PICSI Putative uncharacterized protein OS=Picea... 212 2e-53
tr|B8AI71|B8AI71_ORYSI Putative uncharacterized protein OS=Oryza... 212 2e-53
tr|Q84X98|Q84X98_BRANA Cytoplasmic ribosomal protein S14 OS=Bras... 211 5e-53
tr|B6UHC8|B6UHC8_MAIZE 40S ribosomal protein S14 OS=Zea mays PE=... 210 6e-53
tr|Q6PBW3|Q6PBW3_DANRE Ribosomal protein S14 OS=Danio rerio GN=r... 208 3e-52
tr|B5DGX1|B5DGX1_SALSA 40S ribosomal protein S14 OS=Salmo salar ... 207 5e-52
>tr|A9TTN2|A9TTN2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_198161 PE=3 SV=1
Length = 151
Score = 219 bits (559), Expect = 1e-55
Identities = 112/139 (80%), Positives = 121/139 (87%)
Frame = +1
Query: 67 GRRKAKEVKEENVTISGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMK 246
G++K + KEENVT+ GP RDGEHVFGVAHIFASFNDTFVHVTDLSGKET+ARVTGGMK
Sbjct: 3 GKKKVRAEKEENVTL-GPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMK 61
Query: 247 VKADRDESSPYAAMLAAQDVAQKCKELGLTALHIKLRAXXXXXXXXXXXXAQSAIRALAR 426
VKADRDE+SPYAAMLAAQDVAQ+CKELG+TALHIKLRA AQSA+RALAR
Sbjct: 62 VKADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 121
Query: 427 SGMRIGRIEDVTPIPTDST 483
SGMRIGRIEDVTPIPTDST
Sbjct: 122 SGMRIGRIEDVTPIPTDST 140
>tr|A7QQP3|A7QQP3_VITVI Chromosome undetermined scaffold_143, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00003445001 PE=3 SV=1
Length = 156
Score = 219 bits (559), Expect = 1e-55
Identities = 112/138 (81%), Positives = 120/138 (86%)
Frame = +1
Query: 70 RRKAKEVKEENVTISGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKV 249
RRK +E KEENVT+ GP RDGEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKV
Sbjct: 9 RRKVREPKEENVTL-GPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 67
Query: 250 KADRDESSPYAAMLAAQDVAQKCKELGLTALHIKLRAXXXXXXXXXXXXAQSAIRALARS 429
KADRDESSPYAAMLAAQDVAQ+CKELG+TALHIKLRA AQSA+RALARS
Sbjct: 68 KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 127
Query: 430 GMRIGRIEDVTPIPTDST 483
GMRIGRIEDVTPIPTDST
Sbjct: 128 GMRIGRIEDVTPIPTDST 145
>tr|A7PPA9|A7PPA9_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021579001
PE=3 SV=1
Length = 173
Score = 218 bits (556), Expect = 2e-55
Identities = 111/140 (79%), Positives = 120/140 (85%)
Frame = +1
Query: 64 HGRRKAKEVKEENVTISGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGM 243
+ RRK +E KEENVT+ GP RDGEH FGVAHIFASFNDTF+HVTDLSG+ETL R+TGGM
Sbjct: 24 NSRRKVREPKEENVTL-GPTVRDGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 82
Query: 244 KVKADRDESSPYAAMLAAQDVAQKCKELGLTALHIKLRAXXXXXXXXXXXXAQSAIRALA 423
KVKADRDESSPYAAMLAAQDVAQ+CKELG+TALHIKLRA AQSA+RALA
Sbjct: 83 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 142
Query: 424 RSGMRIGRIEDVTPIPTDST 483
RSGMRIGRIEDVTPIPTDST
Sbjct: 143 RSGMRIGRIEDVTPIPTDST 162
>tr|A7QF89|A7QF89_VITVI Chromosome undetermined scaffold_87, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00037325001 PE=3 SV=1
Length = 192
Score = 218 bits (555), Expect = 3e-55
Identities = 111/138 (80%), Positives = 120/138 (86%)
Frame = +1
Query: 70 RRKAKEVKEENVTISGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKV 249
RRK +E KEENVT+ GP RDGEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKV
Sbjct: 45 RRKVREPKEENVTL-GPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 103
Query: 250 KADRDESSPYAAMLAAQDVAQKCKELGLTALHIKLRAXXXXXXXXXXXXAQSAIRALARS 429
KADRDESSPYAAMLAAQDV+Q+CKELG+TALHIKLRA AQSA+RALARS
Sbjct: 104 KADRDESSPYAAMLAAQDVSQRCKELGVTALHIKLRATGGNKTKTPGPGAQSALRALARS 163
Query: 430 GMRIGRIEDVTPIPTDST 483
GMRIGRIEDVTPIPTDST
Sbjct: 164 GMRIGRIEDVTPIPTDST 181
>tr|A5AX94|A5AX94_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_018475 PE=3 SV=1
Length = 150
Score = 218 bits (555), Expect = 3e-55
Identities = 111/138 (80%), Positives = 120/138 (86%)
Frame = +1
Query: 70 RRKAKEVKEENVTISGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKV 249
RRK +E KEENVT+ GP RDGEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMKV
Sbjct: 3 RRKVREPKEENVTL-GPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 61
Query: 250 KADRDESSPYAAMLAAQDVAQKCKELGLTALHIKLRAXXXXXXXXXXXXAQSAIRALARS 429
KADRDESSPYAAMLAAQDV+Q+CKELG+TALHIKLRA AQSA+RALARS
Sbjct: 62 KADRDESSPYAAMLAAQDVSQRCKELGVTALHIKLRATGGNKTKTPGPGAQSALRALARS 121
Query: 430 GMRIGRIEDVTPIPTDST 483
GMRIGRIEDVTPIPTDST
Sbjct: 122 GMRIGRIEDVTPIPTDST 139
>tr|A3ATP4|A3ATP4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_014166 PE=3 SV=1
Length = 156
Score = 218 bits (555), Expect = 3e-55
Identities = 109/142 (76%), Positives = 123/142 (86%)
Frame = +1
Query: 58 FKHGRRKAKEVKEENVTISGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTG 237
FK GR+K +E KEENVT+ GP R+GE+VFGVAHIFASFNDTF+HVTDLSG+ETL R+TG
Sbjct: 5 FKSGRKKTREPKEENVTL-GPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITG 63
Query: 238 GMKVKADRDESSPYAAMLAAQDVAQKCKELGLTALHIKLRAXXXXXXXXXXXXAQSAIRA 417
GMKVKADRDESSPYAAMLA+QDVAQ+CKELG+TALHIKLRA AQSA+RA
Sbjct: 64 GMKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRA 123
Query: 418 LARSGMRIGRIEDVTPIPTDST 483
LARSGM+IGRIEDVTP+PTDST
Sbjct: 124 LARSGMKIGRIEDVTPVPTDST 145
>tr|B4FKA4|B4FKA4_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 151
Score = 217 bits (553), Expect = 5e-55
Identities = 108/139 (77%), Positives = 121/139 (87%)
Frame = +1
Query: 67 GRRKAKEVKEENVTISGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMK 246
GR+K +E KEENVT+ GP R+GEHVFGVAHIFASFNDTF+HVTDLSG+ETL R+TGGMK
Sbjct: 3 GRKKTREPKEENVTL-GPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMK 61
Query: 247 VKADRDESSPYAAMLAAQDVAQKCKELGLTALHIKLRAXXXXXXXXXXXXAQSAIRALAR 426
VKADRDESSPYAAMLA+QDVAQ+CKELG+TALHIKLRA AQSA+RALAR
Sbjct: 62 VKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 121
Query: 427 SGMRIGRIEDVTPIPTDST 483
SGM+IGRIEDVTP+PTDST
Sbjct: 122 SGMKIGRIEDVTPVPTDST 140
>tr|A9TNC8|A9TNC8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_223910 PE=4 SV=1
Length = 151
Score = 217 bits (553), Expect = 5e-55
Identities = 111/139 (79%), Positives = 120/139 (86%)
Frame = +1
Query: 67 GRRKAKEVKEENVTISGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMK 246
G++K + KEENVT+ GP RDGEHVFGVAHIFASFNDTFVHVTDLSGKET+ARVTGGMK
Sbjct: 3 GKKKVRAEKEENVTL-GPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMK 61
Query: 247 VKADRDESSPYAAMLAAQDVAQKCKELGLTALHIKLRAXXXXXXXXXXXXAQSAIRALAR 426
VKADRDE+SPYAAMLAAQDVAQ+CKELG+TALHIKLRA AQSA+RALAR
Sbjct: 62 VKADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 121
Query: 427 SGMRIGRIEDVTPIPTDST 483
S MRIGRIEDVTPIPTDST
Sbjct: 122 SNMRIGRIEDVTPIPTDST 140
>tr|B8LN86|B8LN86_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 151
Score = 216 bits (550), Expect = 1e-54
Identities = 111/139 (79%), Positives = 121/139 (87%)
Frame = +1
Query: 67 GRRKAKEVKEENVTISGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMK 246
G++K +E KE+NVT+ GP R+GE VFGVAHIFASFNDTFVHVTDLSGKET+ARVTGGMK
Sbjct: 3 GKKKVREPKEDNVTL-GPTVREGEQVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMK 61
Query: 247 VKADRDESSPYAAMLAAQDVAQKCKELGLTALHIKLRAXXXXXXXXXXXXAQSAIRALAR 426
VKADRDESSPYAAMLAAQDVAQ+CKELGLTALHIKLRA AQSA+RALAR
Sbjct: 62 VKADRDESSPYAAMLAAQDVAQRCKELGLTALHIKLRATGGNKTKTPGPGAQSALRALAR 121
Query: 427 SGMRIGRIEDVTPIPTDST 483
SGM+IGRIEDVTPIPTDST
Sbjct: 122 SGMKIGRIEDVTPIPTDST 140
>tr|B3TM39|B3TM39_ELAGV Ribosomal protein S14 OS=Elaeis guineensis
var. tenera PE=2 SV=1
Length = 150
Score = 216 bits (550), Expect = 1e-54
Identities = 109/138 (78%), Positives = 120/138 (86%)
Frame = +1
Query: 70 RRKAKEVKEENVTISGPGARDGEHVFGVAHIFASFNDTFVHVTDLSGKETLARVTGGMKV 249
RRK +E KEENVT+ GP R+GEHVFGVAHIFASFNDTF+HVTDLSG+ET+ R+TGGMKV
Sbjct: 3 RRKTREPKEENVTL-GPTVREGEHVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKV 61
Query: 250 KADRDESSPYAAMLAAQDVAQKCKELGLTALHIKLRAXXXXXXXXXXXXAQSAIRALARS 429
KADRDESSPYAAMLAAQDVAQ+CKELG+TALHIKLRA AQSA+RALARS
Sbjct: 62 KADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 121
Query: 430 GMRIGRIEDVTPIPTDST 483
GM+IGRIEDVTPIPTDST
Sbjct: 122 GMKIGRIEDVTPIPTDST 139
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