DK950698 |
Clone id |
TST38A01NGRL0009_G02 |
Library |
TST38 |
Length |
696 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_G02. 5' end sequence. |
Accession |
DK950698 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL903Contig1 |
Sequence |
CGACCCTCCAGACTCTCGTTTGCCCTCTCTTGGACCTGCGTAACCTGCGTCTGTTGCATG GTAGCGCACCCTTCGTCGAGCCTGTTGCACGTTGCCATTTCTTCATGGTGGAAATTTGAG TCAAGCTGAGCTCCAAAGCTTAACGGATACTGAATTTTGGATGGTGATGGACACCTCCTC TTCAAAGAGCATATTCTTGACCTGGAAAGATTTAAGCGTCAAAGTCCCAGCTGGAGGCAG CCATGGGCAGCCAGCTCGCTACTTGCTGCAGAATGTGAGCGGCTATGCAGAGCCTGGCTC CCTGCTGGCCATCATGGGGCCTTCTGGATGTGGCAAAACTACTCTTCTCAACGCTCTTGC AGGCCGCCTTGGCACCGCAACGGTTGACTCCGGGGAGATTCTCGCCAATGGCCGACGACA AAGTTTATCATATGGCAACTCTGCCTATGTAACTCAGGACGACTCTCTCATCGCGACATT GACCACATATGAGACACTGGTATATTCGGCCCATCTACAGCTTCCTGAGAGCATGACCTC CTTTGAGAAGCAGCGAAGAGTGCAAAATACTATTCGAGAAATGGGTCTGCAAGAATGTGC GGATACACCAGTGGGTGGTTGGTATATCCGAGGGTTGAGTGGGGGGCAGAAGAGACGTCT CAGCATCGCCNTTGAAACTCTGAAGCAGCGGCCATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8RXN0 |
Definition |
sp|Q8RXN0|WBC11_ARATH White-brown complex homolog protein 11 OS=Arabidopsis thaliana |
Align length |
189 |
Score (bit) |
183.0 |
E-value |
7.0e-46 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R4M9 |
Definition |
tr|A7R4M9|A7R4M9_VITVI Chromosome undetermined scaffold_744, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
170 |
Score (bit) |
200.0 |
E-value |
6.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950698|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_G02, 5' (696 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7R4M9|A7R4M9_VITVI Chromosome undetermined scaffold_744, who... 200 6e-50 tr|A7QT48|A7QT48_VITVI Chromosome undetermined scaffold_165, who... 196 9e-49 tr|A7QT46|A7QT46_VITVI Chromosome undetermined scaffold_165, who... 194 6e-48 tr|A5B907|A5B907_VITVI Putative uncharacterized protein OS=Vitis... 194 6e-48 tr|A7PAW2|A7PAW2_VITVI Chromosome chr16 scaffold_10, whole genom... 185 2e-45 tr|A5AQG4|A5AQG4_VITVI Putative uncharacterized protein OS=Vitis... 185 2e-45 tr|Q7XUM2|Q7XUM2_ORYSJ OSJNBa0074L08.3 protein OS=Oryza sativa s... 184 6e-45 tr|Q0JBJ8|Q0JBJ8_ORYSJ Os04g0528300 protein OS=Oryza sativa subs... 184 6e-45 tr|Q01HN4|Q01HN4_ORYSA OSIGBa0115K01-H0319F09.18 protein OS=Oryz... 184 6e-45 tr|A7QT42|A7QT42_VITVI Chromosome undetermined scaffold_165, who... 184 6e-45 tr|A5B6D6|A5B6D6_VITVI Putative uncharacterized protein OS=Vitis... 184 6e-45 tr|A3AVS2|A3AVS2_ORYSJ Putative uncharacterized protein OS=Oryza... 184 6e-45 tr|A2XVR4|A2XVR4_ORYSI Putative uncharacterized protein OS=Oryza... 184 6e-45 tr|Q3ZDP9|Q3ZDP9_ARAGE White-brown complex protein 11 (Fragment)... 183 8e-45 tr|A7R4N0|A7R4N0_VITVI Chromosome undetermined scaffold_744, who... 183 8e-45 tr|A7QT44|A7QT44_VITVI Chromosome undetermined scaffold_165, who... 183 8e-45 tr|A5C3S6|A5C3S6_VITVI Putative uncharacterized protein OS=Vitis... 183 8e-45 tr|B6SL34|B6SL34_MAIZE ATP-binding cassette sub-family G member ... 183 1e-44 tr|A9TBG0|A9TBG0_PHYPA ATP-binding cassette transporter, subfami... 182 2e-44 tr|B6SVU3|B6SVU3_MAIZE ABC transporter C05D10.3 in chromosome II... 181 3e-44 tr|A5BIV5|A5BIV5_VITVI Putative uncharacterized protein OS=Vitis... 181 3e-44 tr|Q8LNT5|Q8LNT5_ORYSJ Os10g0494300 protein OS=Oryza sativa subs... 181 4e-44 tr|Q6K4D2|Q6K4D2_ORYSJ Os09g0472100 protein OS=Oryza sativa subs... 181 4e-44 tr|Q2QT07|Q2QT07_ORYSJ Os12g0411700 protein OS=Oryza sativa subs... 181 4e-44 tr|B8BCP6|B8BCP6_ORYSI Putative uncharacterized protein OS=Oryza... 181 4e-44 tr|A3BZU2|A3BZU2_ORYSJ Putative uncharacterized protein OS=Oryza... 181 4e-44 tr|A2Z8W6|A2Z8W6_ORYSI Putative uncharacterized protein OS=Oryza... 181 4e-44 tr|A9TVN7|A9TVN7_PHYPA ATP-binding cassette transporter, subfami... 179 1e-43 tr|Q6X4V5|Q6X4V5_GOSHI ABC transporter OS=Gossypium hirsutum GN=... 179 2e-43 tr|Q6K4D1|Q6K4D1_ORYSJ Os09g0472200 protein OS=Oryza sativa subs... 179 2e-43
>tr|A7R4M9|A7R4M9_VITVI Chromosome undetermined scaffold_744, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004588001 PE=3 SV=1 Length = 891
Score = 200 bits (509), Expect = 6e-50 Identities = 103/170 (60%), Positives = 128/170 (75%) Frame = +2
Query: 173 TSSSKSIFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLN 352 TS S +FLTWKDL V VP S +P +LQ ++GYA+PG +LAIMGPSGCGK+TLL+ Sbjct: 261 TSKSNGVFLTWKDLWVTVPDQQSGRRP---ILQRLTGYAQPGEVLAIMGPSGCGKSTLLD 317
Query: 353 ALAGRLGTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPES 532 ALAGRLG+ T +GEIL NGR+Q L++G SAYVTQDD+L+ TLT E + YSA LQLP S Sbjct: 318 ALAGRLGSNTRQAGEILINGRKQRLAFGTSAYVTQDDTLMTTLTVREAVHYSAQLQLPGS 377
Query: 533 MTSFEKQRRVQNTIREMGLQECADTPVGGWYIRGLSGGQKRRLSIAXETL 682 M + K+ R + TI EMGLQ+C +T +GGW +GLSGGQKRR+SI E L Sbjct: 378 MPTSAKKERAEMTICEMGLQDCIETRIGGWGKKGLSGGQKRRVSICIEIL 427
>tr|A7QT48|A7QT48_VITVI Chromosome undetermined scaffold_165, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006163001 PE=3 SV=1 Length = 676
Score = 196 bits (499), Expect = 9e-49 Identities = 101/164 (61%), Positives = 124/164 (75%) Frame = +2
Query: 191 IFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRL 370 +FLTW+DL V V G S R +LQ ++GYA PG +LAIMGPSGCGK+TLL+ALAGRL Sbjct: 45 VFLTWEDLWVTVSNGKSG---CRSILQGLTGYARPGEVLAIMGPSGCGKSTLLDALAGRL 101
Query: 371 GTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEK 550 G+ T SG IL NG +Q+LSYG SAYVTQDD+LI TLT E + YSA LQLP+SM+ EK Sbjct: 102 GSNTSQSGIILVNGHKQALSYGTSAYVTQDDTLITTLTVGEAVYYSALLQLPDSMSKSEK 161
Query: 551 QRRVQNTIREMGLQECADTPVGGWYIRGLSGGQKRRLSIAXETL 682 + R TIREMGLQ+ +T +GGW ++G+SGGQKRR+SI E L Sbjct: 162 KERADMTIREMGLQDSINTRIGGWGVKGISGGQKRRVSICIEIL 205
>tr|A7QT46|A7QT46_VITVI Chromosome undetermined scaffold_165, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006161001 PE=3 SV=1 Length = 653
Score = 194 bits (492), Expect = 6e-48 Identities = 99/164 (60%), Positives = 125/164 (76%) Frame = +2
Query: 191 IFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRL 370 IFLTW+DLSV + G G +R LLQ ++G+A PG +LAIMGPSGCGK+TLL+ALAGRL Sbjct: 22 IFLTWEDLSVTA-SNGKGG--SRLLLQGLTGFARPGEVLAIMGPSGCGKSTLLDALAGRL 78
Query: 371 GTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEK 550 G+ SG +L NG +Q+L+YG SAYVTQDD+LI TLT E + YSA LQLP+SM+ EK Sbjct: 79 GSNISQSGMVLVNGHQQTLAYGTSAYVTQDDTLITTLTVGEAVCYSALLQLPDSMSKSEK 138
Query: 551 QRRVQNTIREMGLQECADTPVGGWYIRGLSGGQKRRLSIAXETL 682 + R TIREMGLQ+ +T +GGW ++G+SGGQKRR+SI E L Sbjct: 139 KERADMTIREMGLQDAVNTRIGGWGVKGISGGQKRRVSICIEIL 182
>tr|A5B907|A5B907_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013416 PE=3 SV=1 Length = 658
Score = 194 bits (492), Expect = 6e-48 Identities = 99/164 (60%), Positives = 125/164 (76%) Frame = +2
Query: 191 IFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRL 370 IFLTW+DLSV + G G +R LLQ ++G+A PG +LAIMGPSGCGK+TLL+ALAGRL Sbjct: 56 IFLTWEDLSVTA-SNGKGG--SRLLLQGLTGFARPGEVLAIMGPSGCGKSTLLDALAGRL 112
Query: 371 GTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEK 550 G+ SG +L NG +Q+L+YG SAYVTQDD+LI TLT E + YSA LQLP+SM+ EK Sbjct: 113 GSNISQSGMVLVNGHQQTLAYGTSAYVTQDDTLITTLTVGEAVYYSALLQLPDSMSKSEK 172
Query: 551 QRRVQNTIREMGLQECADTPVGGWYIRGLSGGQKRRLSIAXETL 682 + R TIREMGLQ+ +T +GGW ++G+SGGQKRR+SI E L Sbjct: 173 KERADMTIREMGLQDAVNTRIGGWGVKGISGGQKRRVSICIEIL 216
>tr|A7PAW2|A7PAW2_VITVI Chromosome chr16 scaffold_10, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013847001 PE=3 SV=1 Length = 697
Score = 185 bits (470), Expect = 2e-45 Identities = 101/189 (53%), Positives = 131/189 (69%) Frame = +2
Query: 116 LSQAELQSLTDTEFWMVMDTSSSKSIFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEP 295 LS+ + TDTEF V D S+ LTWKDL+V V Q +L+ ++GYAEP Sbjct: 22 LSETLWKERTDTEF--VGDVSAR----LTWKDLTVMVTLSNGETQK---VLEGLTGYAEP 72
Query: 296 GSLLAIMGPSGCGKTTLLNALAGRLGTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIA 475 G+ A+MGPSG GK+TLL+AL+ RL SG IL NGR+ LS+G +AYVTQDD+LI Sbjct: 73 GTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKTKLSFGTAAYVTQDDNLIG 132
Query: 476 TLTTYETLVYSAHLQLPESMTSFEKQRRVQNTIREMGLQECADTPVGGWYIRGLSGGQKR 655 TLT ET+ YSA L+LP+ M EK+ V++TI EMGLQ+CADT +G W++RG+SGG+KR Sbjct: 133 TLTVRETISYSARLRLPDKMRWSEKRALVESTIIEMGLQDCADTVIGNWHLRGISGGEKR 192
Query: 656 RLSIAXETL 682 R+SIA E L Sbjct: 193 RVSIALEIL 201
>tr|A5AQG4|A5AQG4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006943 PE=3 SV=1 Length = 716
Score = 185 bits (470), Expect = 2e-45 Identities = 101/189 (53%), Positives = 131/189 (69%) Frame = +2
Query: 116 LSQAELQSLTDTEFWMVMDTSSSKSIFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEP 295 LS+ + TDTEF V D S+ LTWKDL+V V Q +L+ ++GYAEP Sbjct: 30 LSETLWKERTDTEF--VGDVSAR----LTWKDLTVMVTLSNGETQK---VLEGLTGYAEP 80
Query: 296 GSLLAIMGPSGCGKTTLLNALAGRLGTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIA 475 G+ A+MGPSG GK+TLL+AL+ RL SG IL NGR+ LS+G +AYVTQDD+LI Sbjct: 81 GTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKTKLSFGTAAYVTQDDNLIG 140
Query: 476 TLTTYETLVYSAHLQLPESMTSFEKQRRVQNTIREMGLQECADTPVGGWYIRGLSGGQKR 655 TLT ET+ YSA L+LP+ M EK+ V++TI EMGLQ+CADT +G W++RG+SGG+KR Sbjct: 141 TLTVRETISYSARLRLPDKMRWSEKRALVESTIIEMGLQDCADTVIGNWHLRGISGGEKR 200
Query: 656 RLSIAXETL 682 R+SIA E L Sbjct: 201 RVSIALEIL 209
>tr|Q7XUM2|Q7XUM2_ORYSJ OSJNBa0074L08.3 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0074L08.3 PE=3 SV=1 Length = 692
Score = 184 bits (466), Expect = 6e-45 Identities = 95/162 (58%), Positives = 119/162 (73%) Frame = +2
Query: 197 LTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRLGT 376 LTWKDLSV V G Q +L ++GYAEPGSL A+MGPSG GK+TLL+ALAGRL Sbjct: 48 LTWKDLSVTVALGPGKTQT---VLDELTGYAEPGSLTALMGPSGSGKSTLLDALAGRLAA 104
Query: 377 ATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEKQR 556 SG +L NGR+ LS+G +AYVTQDD+LI TLT ET+ YSA L+LP+ M +K+ Sbjct: 105 NAFLSGNVLLNGRKAKLSFGAAAYVTQDDNLIGTLTVRETIGYSAMLRLPDKMPREDKRA 164
Query: 557 RVQNTIREMGLQECADTPVGGWYIRGLSGGQKRRLSIAXETL 682 V+ TI EMGLQ+CADT +G W++RG+SGG+KRR+SIA E L Sbjct: 165 LVEGTIVEMGLQDCADTVIGNWHLRGVSGGEKRRVSIALELL 206
>tr|Q0JBJ8|Q0JBJ8_ORYSJ Os04g0528300 protein OS=Oryza sativa subsp. japonica GN=Os04g0528300 PE=3 SV=1 Length = 711
Score = 184 bits (466), Expect = 6e-45 Identities = 95/162 (58%), Positives = 119/162 (73%) Frame = +2
Query: 197 LTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRLGT 376 LTWKDLSV V G Q +L ++GYAEPGSL A+MGPSG GK+TLL+ALAGRL Sbjct: 67 LTWKDLSVTVALGPGKTQT---VLDELTGYAEPGSLTALMGPSGSGKSTLLDALAGRLAA 123
Query: 377 ATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEKQR 556 SG +L NGR+ LS+G +AYVTQDD+LI TLT ET+ YSA L+LP+ M +K+ Sbjct: 124 NAFLSGNVLLNGRKAKLSFGAAAYVTQDDNLIGTLTVRETIGYSAMLRLPDKMPREDKRA 183
Query: 557 RVQNTIREMGLQECADTPVGGWYIRGLSGGQKRRLSIAXETL 682 V+ TI EMGLQ+CADT +G W++RG+SGG+KRR+SIA E L Sbjct: 184 LVEGTIVEMGLQDCADTVIGNWHLRGVSGGEKRRVSIALELL 225
>tr|Q01HN4|Q01HN4_ORYSA OSIGBa0115K01-H0319F09.18 protein OS=Oryza sativa GN=OSIGBa0115K01-H0319F09.18 PE=3 SV=1 Length = 692
Score = 184 bits (466), Expect = 6e-45 Identities = 95/162 (58%), Positives = 119/162 (73%) Frame = +2
Query: 197 LTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRLGT 376 LTWKDLSV V G Q +L ++GYAEPGSL A+MGPSG GK+TLL+ALAGRL Sbjct: 48 LTWKDLSVTVALGPGKTQT---VLDELTGYAEPGSLTALMGPSGSGKSTLLDALAGRLAA 104
Query: 377 ATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEKQR 556 SG +L NGR+ LS+G +AYVTQDD+LI TLT ET+ YSA L+LP+ M +K+ Sbjct: 105 NAFLSGNVLLNGRKAKLSFGAAAYVTQDDNLIGTLTVRETIGYSAMLRLPDKMPREDKRA 164
Query: 557 RVQNTIREMGLQECADTPVGGWYIRGLSGGQKRRLSIAXETL 682 V+ TI EMGLQ+CADT +G W++RG+SGG+KRR+SIA E L Sbjct: 165 LVEGTIVEMGLQDCADTVIGNWHLRGVSGGEKRRVSIALELL 206
>tr|A7QT42|A7QT42_VITVI Chromosome undetermined scaffold_165, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006157001 PE=3 SV=1 Length = 637
Score = 184 bits (466), Expect = 6e-45 Identities = 94/164 (57%), Positives = 122/164 (74%) Frame = +2
Query: 191 IFLTWKDLSVKVPAGGSHGQPARYLLQNVSGYAEPGSLLAIMGPSGCGKTTLLNALAGRL 370 +++TWK+LSV V G ++++LQ ++GYA+P +LAIMGPSG GK+TLL+ALAGRL Sbjct: 24 VYVTWKELSVTVSNG------SKFILQGLTGYAQPSQVLAIMGPSGSGKSTLLDALAGRL 77
Query: 371 GTATVDSGEILANGRRQSLSYGNSAYVTQDDSLIATLTTYETLVYSAHLQLPESMTSFEK 550 + T +GEIL NGR+Q +YG AYVTQDD+L TLT E + YSA LQLP+SM+ EK Sbjct: 78 DSRTRHTGEILINGRKQWSAYGTMAYVTQDDTLTWTLTVREAVFYSAQLQLPKSMSISEK 137
Query: 551 QRRVQNTIREMGLQECADTPVGGWYIRGLSGGQKRRLSIAXETL 682 + R + TIREMGLQ+ DT +GGW +GLSGGQKRR+SI E L Sbjct: 138 KERSETTIREMGLQDSMDTRIGGWGSKGLSGGQKRRVSICIEIL 181
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