DK950699 |
Clone id |
TST38A01NGRL0009_G03 |
Library |
TST38 |
Length |
700 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_G03. 5' end sequence. |
Accession |
DK950699 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2467Contig1 |
Sequence |
TTTGCCTTGGCTCACCCCCAACAACACACACACACACAGACAAACGCGCACAGGTTTTTG CGCATACAAAGTTTTGAAAACGCCCACAAAGCATTAAGAAAAAATATGGCGCTGCTGAAG GTGATGGAGATGATAGTGGCGCACCCAGATCCTGTTGGGCTGCGTGCGGTGCAGGTTTTC AATCTGGTCGGCGCTATCAGGATGGTCTTTGCTGAGCGTCGCGGAGAAAGCATGCCCTAC TCCAAATTTGCTCAGACTGATTCCATCAAGGGGCGCATATTTTCGTCAAGGACCGGCATG GCCATCATTTACAGCCCTGCTGCCCTCGTCTGTGCCTGCTTCCTCCTCACCAAGCTCTCA TCCCCGGCTCCCGATCACCGCCTAGTTGTGTTTTCCACCGCCCTCACCATTCACTTCATC AGAAGGCTCCTAGAGGTTTTCTTTGTGCATAAGTACTCTGGCTCTATGGAGATGTCATTG AGCTTCACCATATCTATTTTTTATGCACTCGCATCCGCGCAACAACTGTATGCACAACAT TTTTCAGTACATCAGCAACCTCCATCAATAGACCTAATGAGGTTTGGCATGGTGCTCTTT CTAGTGGGAATAGTTGGCAATTTCTACCACCATAGCTTGCTAGCTGGCCTTCGGAAGGAC GATAAGGACAAAGATGGCAAGAAGTGGTATGTAATCCCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q64232 |
Definition |
sp|Q64232|GPSN2_RAT Synaptic glycoprotein SC2 OS=Rattus norvegicus |
Align length |
85 |
Score (bit) |
37.7 |
E-value |
0.06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QLP7 |
Definition |
tr|A7QLP7|A7QLP7_VITVI Chromosome chr13 scaffold_120, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
186 |
Score (bit) |
106.0 |
E-value |
2.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950699|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_G03, 5' (700 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QLP7|A7QLP7_VITVI Chromosome chr13 scaffold_120, whole geno... 106 2e-21 tr|Q9LFS3|Q9LFS3_ARATH Steroid 5alpha-reductase-like protein (At... 105 2e-21 tr|A2YIE9|A2YIE9_ORYSI Putative uncharacterized protein OS=Oryza... 105 4e-21 tr|A7P2A7|A7P2A7_VITVI Chromosome chr19 scaffold_4, whole genome... 104 6e-21 tr|Q8H539|Q8H539_ORYSJ Os07g0162100 protein OS=Oryza sativa subs... 102 2e-20 tr|A7QLP9|A7QLP9_VITVI Chromosome chr13 scaffold_120, whole geno... 99 3e-19 tr|B6SU65|B6SU65_MAIZE 3-oxo-5-alpha-steroid 4-dehydrogenase 2 O... 98 6e-19 tr|A7QLQ0|A7QLQ0_VITVI Chromosome chr13 scaffold_120, whole geno... 91 5e-17 tr|A9TVY2|A9TVY2_PHYPA Predicted protein OS=Physcomitrella paten... 91 9e-17 tr|A9S7D3|A9S7D3_PHYPA Predicted protein OS=Physcomitrella paten... 76 2e-12 tr|B8BZJ2|B8BZJ2_THAPS Predicted protein (Fragment) OS=Thalassio... 72 4e-11 tr|A3BGT8|A3BGT8_ORYSJ Putative uncharacterized protein OS=Oryza... 71 6e-11 tr|B7G1M2|B7G1M2_PHATR Predicted protein OS=Phaeodactylum tricor... 59 3e-07 tr|A6GFR1|A6GFR1_9DELT Putative steroid dehydrogenase OS=Plesioc... 58 7e-07 tr|A9NNE1|A9NNE1_PICSI Putative uncharacterized protein OS=Picea... 47 0.001 tr|Q19Q41|Q19Q41_9DIPT Synaptic glycoprotein SC2-like (Fragment)... 45 0.003 tr|A7SFY9|A7SFY9_NEMVE Predicted protein (Fragment) OS=Nematoste... 45 0.005 tr|Q4RZW0|Q4RZW0_TETNG Chromosome 18 SCAF14786, whole genome sho... 40 0.19 tr|A7S6S0|A7S6S0_NEMVE Predicted protein OS=Nematostella vectens... 40 0.19 tr|A1CI16|A1CI16_ASPCL Steroid alpha reductase family protein OS... 40 0.19 tr|Q6GP78|Q6GP78_XENLA MGC80625 protein OS=Xenopus laevis GN=gps... 38 0.55 tr|Q5BKP0|Q5BKP0_XENTR Gpsn2 protein OS=Xenopus tropicalis GN=gp... 38 0.55 tr|B3SVE9|B3SVE9_RAT Neuroprotective protein 13 OS=Rattus norveg... 38 0.72 tr|B6PQG9|B6PQG9_BRAFL Putative uncharacterized protein OS=Branc... 38 0.72 tr|Q52L67|Q52L67_MOUSE Gpsn2 protein OS=Mus musculus GN=Gpsn2 PE... 37 0.94 tr|Q3TAN8|Q3TAN8_MOUSE Putative uncharacterized protein OS=Mus m... 37 0.94 tr|Q16XY3|Q16XY3_AEDAE Synaptic glycoprotein sc2 OS=Aedes aegypt... 37 0.94 tr|Q9CWN2|Q9CWN2_MOUSE Putative uncharacterized protein OS=Mus m... 37 1.2 tr|Q4WPX1|Q4WPX1_ASPFU Steroid alpha reductase family protein OS... 37 1.2 tr|B6HQI7|B6HQI7_PENCH Pc22g07000 protein OS=Penicillium chrysog... 37 1.2
>tr|A7QLP7|A7QLP7_VITVI Chromosome chr13 scaffold_120, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001715001 PE=4 SV=1 Length = 280
Score = 106 bits (264), Expect = 2e-21 Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 1/186 (0%) Frame = +1
Query: 100 KNMALLKVMEMIVAHPDPVGLRAVQVFNLVGAIRMVFAERRGESMPYSKFAQTDSIKGRI 279 + +A+++ ++ + +P + + + N++G F E G ++ YSK +S + ++ Sbjct: 19 RRIAMMETLDFL--YPSSSFITTMSMINILGLSFFGFLEMMGINLQYSKLWNPNSKRIKV 76
Query: 280 FSSRTGMAIIYSPAALV-CACFLLTKLSSPAPDHRLVVFSTALTIHFIRRLLEVFFVHKY 456 SSRTGM ++Y+PA LV A F + P R ++ +TALTIHF +R+LEV FVHKY Sbjct: 77 -SSRTGMLLLYTPAFLVGFASFWIF----PEKGFRPLLVTTALTIHFFKRVLEVLFVHKY 131
Query: 457 SGSMEMSLSFTISIFXXXXXXXXXXXXHFSVHQQPPSIDLMRFGMVLFLVGIVGNFYHHS 636 SG M + IS H + P+IDL G++LF VGI GNFYHH Sbjct: 132 SGGMVLDSIILISSGYSTTTATMIHAQHIAQGFMEPAIDLKCPGILLFSVGICGNFYHHY 191
Query: 637 LLAGLR 654 LL+ LR Sbjct: 192 LLSKLR 197
>tr|Q9LFS3|Q9LFS3_ARATH Steroid 5alpha-reductase-like protein (At5g16010/F1N13_150) OS=Arabidopsis thaliana GN=F1N13_150 PE=2 SV=1 Length = 268
Score = 105 bits (263), Expect = 2e-21 Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Frame = +1
Query: 124 MEMIVAH----PDPVGLRAVQVFNLVGAIRMVFAERRGESMPYSKFAQTDSI----KGRI 279 MEM+ + P + L + V + + ++E RG + YSKF + S K R Sbjct: 1 MEMVTSFVYPPPPSILLNCMSVVGVAALANIGWSEIRGNHLKYSKFGVSSSSPQPQKERF 60
Query: 280 --FSSRTGMAIIYSPAALVCACFLLTKLSSPAPDHRLVVFSTALTIHFIRRLLEVFFVHK 453 SSR GM ++Y+PA L A P+ D R ++ +AL +HF +R+ EV F+HK Sbjct: 61 GSISSRNGMLLLYTPAFLAAASSFFVV---PSDDLRFLLLKSALALHFFKRVFEVLFIHK 117
Query: 454 YSGSMEMSLSFTISIFXXXXXXXXXXXXHFSVHQQPPSIDLMRFGMVLFLVGIVGNFYHH 633 YSG M + + TIS + ++ PS D+ G+V+F+VGIVGN YHH Sbjct: 118 YSGGMAIDSALTISSSYFSSTALMLYSQNLTLGLTEPSFDMKLAGVVMFVVGIVGNLYHH 177
Query: 634 SLLAGLR 654 LLA LR Sbjct: 178 VLLAKLR 184
>tr|A2YIE9|A2YIE9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24990 PE=4 SV=1 Length = 273
Score = 105 bits (261), Expect = 4e-21 Identities = 65/175 (37%), Positives = 86/175 (49%), Gaps = 5/175 (2%) Frame = +1
Query: 145 PDPVGLRAVQVFNLVGAIRMVFAERRGESMPYSKFAQTDSIK-----GRIFSSRTGMAII 309 P P + A V E RGE M YSKF Q + K G + SR GM + Sbjct: 12 PAPAFVAAASVAQFALLANAGLGELRGEHMAYSKFWQVVAGKKKNGGGALLPSRQGMLVA 71
Query: 310 YSPAALVCACFLLTKLSSPAPDHRLVVFSTALTIHFIRRLLEVFFVHKYSGSMEMSLSFT 489 Y PA + A + R V S ALT+HF++R+LEV F+H+YSGSM ++ + T Sbjct: 72 YVPAFVAAAASFA--VPGAVVGVRAQVLSAALTVHFLKRILEVLFIHQYSGSMPLNTAAT 129
Query: 490 ISIFXXXXXXXXXXXXHFSVHQQPPSIDLMRFGMVLFLVGIVGNFYHHSLLAGLR 654 IS H + P +DL+ G+ +F VGI GNFYHH LL+ LR Sbjct: 130 ISSSYLVITATMIYAQHLAAGLPDPPVDLLYPGVAVFAVGIAGNFYHHYLLSQLR 184
>tr|A7P2A7|A7P2A7_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027946001 PE=4 SV=1 Length = 259
Score = 104 bits (259), Expect = 6e-21 Identities = 64/178 (35%), Positives = 90/178 (50%), Gaps = 1/178 (0%) Frame = +1
Query: 124 MEMIVAHPDPVGLRAVQVFNLVGAIRMVFAERRGESMPYSKFAQTDSIKGRIFSSRTGMA 303 + + P + + A+ V + +E +G+ M YSKF + S + SRTGM Sbjct: 3 LRFVFPPPPSLLVTAMSVVSFASMANAGLSELKGKHMEYSKFWELKSGRKYKVDSRTGMI 62
Query: 304 IIYSPAALV-CACFLLTKLSSPAPDHRLVVFSTALTIHFIRRLLEVFFVHKYSGSMEMSL 480 + Y+PA L A F L P R ++ ++AL+IHF +R+ EV FVHKYSG M + Sbjct: 63 VCYTPAFLAGVASFALF----PDESFRFLLLTSALSIHFFKRIFEVLFVHKYSGGMALDA 118
Query: 481 SFTISIFXXXXXXXXXXXXHFSVHQQPPSIDLMRFGMVLFLVGIVGNFYHHSLLAGLR 654 + IS+ H S P +DL GM LFLVGI+GN YHH L+ LR Sbjct: 119 AIVISLSYFISTATMIYAQHLSRDFPEPLMDLKYPGMALFLVGILGNLYHHCQLSKLR 176
>tr|Q8H539|Q8H539_ORYSJ Os07g0162100 protein OS=Oryza sativa subsp. japonica GN=OJ1714_H10.144 PE=4 SV=1 Length = 277
Score = 102 bits (255), Expect = 2e-20 Identities = 65/179 (36%), Positives = 85/179 (47%), Gaps = 9/179 (5%) Frame = +1
Query: 145 PDPVGLRAVQVFNLVGAIRMVFAERRGESMPYSKFAQTDSIK---------GRIFSSRTG 297 P P + A V E RGE M YSKF Q + K G + SR G Sbjct: 12 PAPAFVAAASVAQFALLANAGLGELRGEHMAYSKFWQVVAGKKKNGGGGGGGALLPSRQG 71
Query: 298 MAIIYSPAALVCACFLLTKLSSPAPDHRLVVFSTALTIHFIRRLLEVFFVHKYSGSMEMS 477 M + Y PA + A + R V S ALT+HF++R+LEV F+H+YSGSM ++ Sbjct: 72 MLVAYVPAFVAAAASFA--VPGAVVGVRAQVLSAALTVHFLKRILEVLFIHQYSGSMPLN 129
Query: 478 LSFTISIFXXXXXXXXXXXXHFSVHQQPPSIDLMRFGMVLFLVGIVGNFYHHSLLAGLR 654 + TIS H + P +DL+ G+ F VGI GNFYHH LL+ LR Sbjct: 130 TAATISSSYLVITATMIYAQHLAAGLPDPPVDLLYPGVAAFAVGIAGNFYHHYLLSQLR 188
>tr|A7QLP9|A7QLP9_VITVI Chromosome chr13 scaffold_120, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001717001 PE=4 SV=1 Length = 258
Score = 98.6 bits (244), Expect = 3e-19 Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 4/166 (2%) Frame = +1
Query: 169 VQVFNLVGAIRMVF---AERRGESMPYSKFAQTDSIKGRIFSSRTGMAIIYSPAALV-CA 336 + +LVG + + F E G + YSK +S + ++ SS GM ++Y+PA L A Sbjct: 15 ITTMSLVGFLSISFFGVLEILGIHLQYSKLWNANSRRIKV-SSTAGMLLLYAPACLFGFA 73
Query: 337 CFLLTKLSSPAPDHRLVVFSTALTIHFIRRLLEVFFVHKYSGSMEMSLSFTISIFXXXXX 516 F + P + R ++ ++ALTIHF +R+LE+ FVHKYSG M + IS+ Sbjct: 74 SFWIF----PENNFRSLLVASALTIHFFKRVLEILFVHKYSGGMVLDSGILISLSYTLST 129
Query: 517 XXXXXXXHFSVHQQPPSIDLMRFGMVLFLVGIVGNFYHHSLLAGLR 654 H PSIDL G++LFLVGI GNFYHH LL+ LR Sbjct: 130 ATMIYIQHLVQGSMEPSIDLKYPGILLFLVGIYGNFYHHLLLSRLR 175
>tr|B6SU65|B6SU65_MAIZE 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Zea mays PE=2 SV=1 Length = 278
Score = 97.8 bits (242), Expect = 6e-19 Identities = 63/180 (35%), Positives = 86/180 (47%), Gaps = 10/180 (5%) Frame = +1
Query: 145 PDPVGLRAVQVFNLVGAIRMVFAERRGESMPYSKF---------AQTDSIKGR-IFSSRT 294 P + A+ + V AE RG+ MPYSKF T G + SR Sbjct: 18 PASAYVAAMSAVSFVSMANAGLAELRGDHMPYSKFWHAVAGAAGGDTRQQGGMPLLRSRD 77
Query: 295 GMAIIYSPAALVCACFLLTKLSSPAPDHRLVVFSTALTIHFIRRLLEVFFVHKYSGSMEM 474 GM + Y+PA L A + R + S AL HF++R+LEV VH+YSGSM + Sbjct: 78 GMLLAYAPALLAAAASFA--VPGAVEGARAELLSAALAAHFLKRVLEVLCVHRYSGSMPL 135
Query: 475 SLSFTISIFXXXXXXXXXXXXHFSVHQQPPSIDLMRFGMVLFLVGIVGNFYHHSLLAGLR 654 + TIS H S P++DL+ G+++F VG+ GN YHH LL+GLR Sbjct: 136 GTAATISCSYLVSTATMVYAQHLSRGLPDPAVDLLCPGVLVFAVGLAGNLYHHRLLSGLR 195
>tr|A7QLQ0|A7QLQ0_VITVI Chromosome chr13 scaffold_120, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001718001 PE=4 SV=1 Length = 243
Score = 91.3 bits (225), Expect = 5e-17 Identities = 60/151 (39%), Positives = 78/151 (51%), Gaps = 2/151 (1%) Frame = +1
Query: 208 FAERRGESMPYSKFAQTDSIKGRI-FSSRTGMAIIYSPAALVCACFLLTKLSS-PAPDHR 381 F E G + YSK +S + I SS M +Y+PA L F L+ P D R Sbjct: 14 FLEMLGIHLQYSKLWNVNSRRPSIKVSSTADMLFLYTPAFL----FGLSSFGLFPDNDFR 69
Query: 382 LVVFSTALTIHFIRRLLEVFFVHKYSGSMEMSLSFTISIFXXXXXXXXXXXXHFSVHQQP 561 + ++ALT+HF++R LEV F+HKYSG M + IS+ H Sbjct: 70 CGLVASALTVHFLKRNLEVLFIHKYSGGMVLDSGIVISLSYFTSTATTIYSQHLVQGSME 129
Query: 562 PSIDLMRFGMVLFLVGIVGNFYHHSLLAGLR 654 P IDL G++LFLVGI GNFYHH LL+ LR Sbjct: 130 PLIDLKCPGILLFLVGISGNFYHHYLLSKLR 160
>tr|A9TVY2|A9TVY2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_151601 PE=4 SV=1 Length = 233
Score = 90.5 bits (223), Expect = 9e-17 Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 2/152 (1%) Frame = +1
Query: 205 VFAERRGESMPYSKFAQTDSIKGR-IFSSRTGMAIIY-SPAALVCACFLLTKLSSPAPDH 378 ++ E G++M Y+KFA + + SR GM IY S A A FL ++ A D Sbjct: 1 MYNEATGKNMGYAKFASALGKDNKAMVPSRVGMLSIYISIGASGAASFLDQAVA--ASDD 58
Query: 379 RLVVFSTALTIHFIRRLLEVFFVHKYSGSMEMSLSFTISIFXXXXXXXXXXXXHFSVHQQ 558 RL++ + AL++HF++R +EV F+H++SGSM + + TIS S + Sbjct: 59 RLLLVAAALSVHFVKRSVEVLFLHRFSGSMSVGDAVTISTSYSLQVVLLLYSQLLSADIE 118
Query: 559 PPSIDLMRFGMVLFLVGIVGNFYHHSLLAGLR 654 PS D G+ +FL+G+ GNFYHH +LA LR Sbjct: 119 APSPDTKYLGVAVFLIGLTGNFYHHWILANLR 150
>tr|A9S7D3|A9S7D3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181942 PE=4 SV=1 Length = 290
Score = 75.9 bits (185), Expect = 2e-12 Identities = 62/197 (31%), Positives = 88/197 (44%), Gaps = 27/197 (13%) Frame = +1
Query: 145 PDPVGLRAVQVFNLVGAIRMVFAERRGESMPYSKFAQTDSIKGRIFSSRTGMAIIYSPAA 324 PD L V + L I M+ +E G + YSKFA + K R S +TGM + Y P+ Sbjct: 11 PDSGILSVVPLVILGIGILMMLSELTGNQLQYSKFATGNDSKTRTLSGKTGMFLNYLPSG 70
Query: 325 LVC-------------------------ACFLLTKLSSPAPDHRLVVFSTALTIHFIRRL 429 +V A L+ + S D+RL++ + AL++ F +RL Sbjct: 71 VVASVLVAYMLGVLPMLPSLLQSCGASSAASLIEQAVSNDSDNRLLLVALALSLLFDKRL 130
Query: 430 LEVFFVHKYSGSMEMS--LSFTISIFXXXXXXXXXXXXHFSVHQQPPSIDLMRFGMVLFL 603 LEV FV K+SG+ + T + F + P+ +L G+ LFL Sbjct: 131 LEVLFVQKFSGTTTANTVAFITNAYFSNTIILLYAQLWVTAQGFAAPTPNLKWPGLALFL 190
Query: 604 VGIVGNFYHHSLLAGLR 654 V I GN YHH LLA LR Sbjct: 191 VAITGNGYHHWLLANLR 207
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