DK950701 [AcEST]

DK950701
Clone id	TST38A01NGRL0009_G05
Library	TST38
Length	663
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_G05. 5' end sequence.
Accession	DK950701
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL273Contig1
Sequence	CTCCCTCTCTCTGTCTCGTCTGCTCGCCTGCTTGCCATGTCCATTCGAGAAGCTGTAGAC TTTCGGCTGCACGAGCTCCAACAACTAGTATCAGAGCACTTGGTGGTGTTCTTGGCAACC TGAGGTCGCCGTAGCAACTGTTGTTGGCGGACATACCTCTTAAAACGCTCTCTGTTGGTG ACGCAAGAAAACCCCACACGGTGTTGCTAGGTGAGGAGGCGAGAAGAAGGTCAAGAAGGA GAAAGGAAGCTCAGATAGAGACGCTTGAGATCAGTTGGAACAAGGCGGTGGCTAGTGGCT CTCAGCGCATACCAGTTGGACGTAGTAAGCGGTGGTGGTAGGACAACCCACAAGACGGGG TGCTTTTTTTTTTCCCCCCCCCTCTAGCAGTCGGTTAACAGCACCAAAAAAAGAGAGGGG GGGGATAATTGGACTCACTGGCGATGCCTAACCTCTAACACGCCTTCAGAGGATCGGTCT CACTTGCAAACTCCGGCCAAGAAGTTCAACCCGTTGTTGGCAAGGGGGCGTGAATATACN AGGGAATCTCAGGTGATCAATCTCGGCACAGAGCAGTGCTGACGGCGCAAGGAAATCTCG ACGGTGTTGGGCGACCACACGCACACACACTCTGACGATGTAATCAGTGGTGTCAGATAC CCA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q674R7
Definition	sp\|Q674R7\|ATG9B_HUMAN Autophagy-related protein 9B OS=Homo sapiens
Align length	29
Score (bit)	32.3
E-value	2.3
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950701\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_G05, 5' (663 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q674R7\|ATG9B_HUMAN Autophagy-related protein 9B OS=Homo sapie... 32 2.3 sp\|A5UKY8\|RS3A_METS3 30S ribosomal protein S3Ae OS=Methanobrevib... 30 8.8 >sp\|Q674R7\|ATG9B_HUMAN Autophagy-related protein 9B OS=Homo sapiens GN=ATG9B PE=2 SV=1 Length = 924 Score = 32.3 bits (72), Expect = 2.3 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -3 Query: 184 ASPTESVLRGMSANNSCYGDLRLPRTPPS 98 A P SVL+G A+ SC+ L +P TPP+ Sbjct: 71 AGPPCSVLQGTGASQSCHSALPIPATPPT 99 >sp\|A5UKY8\|RS3A_METS3 30S ribosomal protein S3Ae OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps3Ae PE=3 SV=1 Length = 193 Score = 30.4 bits (67), Expect = 8.8 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%) Frame = +1 Query: 409 KREGGDNWTHWRCLTSNTPS--EDRSHLQTPAKKFNPLLARGREYTRESQVINLGTEQC* 582 +R D W T TP ED+ +TPA+ + L+ RG E T + + Sbjct: 7 RRRVRDTWKEKSWYTIKTPVNFEDKEIGETPARDPDYLIGRGVEVTMRELSGDFSKQYIK 66 Query: 583 RRKEISTVLGDHTHT 627 R EI V GD +T Sbjct: 67 LRFEIDNVAGDVANT 81
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950701\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_G05, 5' (663 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****