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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950702
Clone id TST38A01NGRL0009_G06
Library
Length 666
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_G06. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CGGGGACGAGCCGGGGAGCATGGCATCTCTTGTGAAAGCTCCTGCATCCCCGTGCACCGC
TTCCACCACTGCTCATTTCCAGCAGAGTCTACCGCAGCAGAGTCGGAGTTTGCCATTCTT
GAGTCGCTCTGGCACAGGCTTAGCACTCTCCTCCAGTGCCTATCAGTGTAGCAGTTCAAA
GTCTTCATTTGTGGGACTCCAAACAAAGCTTGAGAATCTCATCTTGCATTCGTCTTCAGC
CACTGGATCGGGCAGTACCCGGGCAGTAGTTTCCATGTCAAAACCAGTTATTCAGTTTAT
CAAAGGCGTGAACGAGCAAACTATTCCTGATGTTTCTCTTACAAGATCTAAAGATGGGAC
TAATGGAGTTGCAACTTTTAGCTTTGAGCAGCCGTCAGTTTTTGATGCTGCTGGAGAGTT
GAGGGACATCACAGGGCTTTTCATGCAAGATGAAGAGGGTGTTCTTTCAACAGTTGATGT
CAGTGCCAAGTTTGTTAACGGAAAACCTTCAAGGATTGAGGCTCGGTACATAATGAGAAC
ATTGAAGGACTGGGACAGGTTCATGCGCTTCATGGAGAGATATGCCGAAGCCAATGGTCT
TGGATTTGTGAAGAAGTGAATAGCAGAGCCTGTGTTTTTTTGACATCCTTTCTGCACCTT
GTGCCT
■■Homology search results ■■ -
sp_hit_id Q0JG75
Definition sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 protein, chloroplastic OS=Oryza sativa subsp. japonica
Align length 117
Score (bit) 176.0
E-value 9.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950702|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_G06, 5'
         (651 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 prote...   176   9e-44
sp|Q8W0Y8|PSB28_ARATH Photosystem II reaction center PSB28 prote...   166   1e-40
sp|Q00UI6|PSB28_OSTTA Photosystem II reaction center psb28 prote...   149   1e-35
sp|O78418|PSB28_GUITH Photosystem II reaction center psb28 prote...   140   6e-33
sp|Q5MZB9|PSB28_SYNP6 Photosystem II reaction center psb28 prote...   135   2e-31
sp|Q31ML0|PSB28_SYNE7 Photosystem II reaction center psb28 prote...   135   2e-31
sp|B0CE32|PSB28_ACAM1 Photosystem II reaction center psb28 prote...   135   2e-31
sp|A0T0H5|PSB28_PHATR Photosystem II reaction center psb28 prote...   134   4e-31
sp|Q6B8Z7|PSB28_GRATL Photosystem II reaction center psb28 prote...   133   7e-31
sp|A0T0W9|PSB28_THAPS Photosystem II reaction center psb28 prote...   133   9e-31
sp|Q1XDE0|PSB28_PORYE Photosystem II reaction center psb28 prote...   133   9e-31
sp|P51347|PSB28_PORPU Photosystem II reaction center psb28 prote...   133   9e-31
sp|P49508|PSB28_ODOSI Photosystem II reaction center psb28 prote...   131   3e-30
sp|P48264|PSB28_CYAPA Photosystem II reaction center psb28 prote...   131   3e-30
sp|Q8DLJ8|PSB28_THEEB Photosystem II reaction center psb28 prote...   126   1e-28
sp|Q3AKD0|PSB28_SYNSC Photosystem II reaction center psb28 prote...   124   6e-28
sp|Q7U7C0|PSB28_SYNPX Photosystem II reaction center psb28 prote...   122   2e-27
sp|Q9TLZ2|PSB28_CYACA Photosystem II reaction center psb28 prote...   122   2e-27
sp|Q85G21|PSB28_CYAME Photosystem II reaction center psb28 prote...   121   3e-27
sp|Q3MFL9|PSB28_ANAVT Photosystem II reaction center psb28 prote...   121   3e-27
sp|Q8YYP5|PSB28_ANASP Photosystem II reaction center psb28 prote...   120   5e-27
sp|A5GLG6|PSB28_SYNPW Photosystem II reaction center psb28 prote...   120   6e-27
sp|Q0I9T4|PSB28_SYNS3 Photosystem II reaction center psb28 prote...   119   1e-26
sp|A2CA72|PSB28_PROM3 Photosystem II reaction center psb28 prote...   116   1e-25
sp|Q3AXG3|PSB28_SYNS9 Photosystem II reaction center psb28 prote...   114   3e-25
sp|Q7TV11|PSB28_PROMM Photosystem II reaction center psb28 prote...   114   3e-25
sp|Q112E8|PSB28_TRIEI Photosystem II reaction center psb28 prote...   114   6e-25
sp|Q55356|PSB28_SYNY3 Photosystem II reaction center psb28 prote...   112   1e-24
sp|Q7VCG9|PSB28_PROMA Photosystem II reaction center psb28 prote...   110   6e-24
sp|A2BWQ5|PSB28_PROM5 Photosystem II reaction center psb28 prote...   106   9e-23

>sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 protein,
           chloroplastic OS=Oryza sativa subsp. japonica GN=PSB28
           PE=2 SV=2
          Length = 180

 Score =  176 bits (446), Expect = 9e-44
 Identities = 82/117 (70%), Positives = 103/117 (88%)
 Frame = +2

Query: 251 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 430
           V+  ++P IQFI+G +EQTIPDV LT+S+DGTNGVA F+F+QPSVFD++ EL DITG +M
Sbjct: 64  VMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYM 123

Query: 431 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 601
            D+EGVL +VDVSAKFVNGKP+ IEA+Y+MRT ++WDRFMRFMERY++ANGL FVKK
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVKK 180


>sp|Q8W0Y8|PSB28_ARATH Photosystem II reaction center PSB28 protein,
           chloroplastic OS=Arabidopsis thaliana GN=PSB28 PE=1 SV=1
          Length = 183

 Score =  166 bits (419), Expect = 1e-40
 Identities = 76/117 (64%), Positives = 99/117 (84%)
 Frame = +2

Query: 251 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 430
           +  M KP +QFI+G +E TIPDV LTRS+DG+NG+A FSF+QPSVFD++GE+ +ITGL+M
Sbjct: 66  ITMMVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYM 125

Query: 431 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 601
            DEEGV+ + DV+A+FVNGKP  I A++IMR+ K+WDRFMRFMERY++ NGL FVKK
Sbjct: 126 IDEEGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFMERYSDQNGLQFVKK 182


>sp|Q00UI6|PSB28_OSTTA Photosystem II reaction center psb28 protein,
           chloroplastic OS=Ostreococcus tauri GN=psb28 PE=3 SV=1
          Length = 147

 Score =  149 bits (376), Expect = 1e-35
 Identities = 73/109 (66%), Positives = 86/109 (78%)
 Frame = +2

Query: 275 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEGVLS 454
           IQF+KG NE  +P+V LTRSKDG+NG A F F  P VF+      DITG+F+ DEEG +S
Sbjct: 41  IQFVKGQNETAVPEVRLTRSKDGSNGTAFFIFSDPDVFENGQG--DITGMFLTDEEGEMS 98

Query: 455 TVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 601
           TVDV+AKFVNGKP+ IEARY+M+T  DW+RFMRFMERYAE NGLGF KK
Sbjct: 99  TVDVNAKFVNGKPTGIEARYVMKTEADWNRFMRFMERYAEDNGLGFSKK 147


>sp|O78418|PSB28_GUITH Photosystem II reaction center psb28 protein
           OS=Guillardia theta GN=psb28 PE=3 SV=1
          Length = 116

 Score =  140 bits (353), Expect = 6e-33
 Identities = 69/110 (62%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
 Frame = +2

Query: 272 VIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGV 448
           VIQFI+GVNE  IPDV LTRS+DG+ G ATF F  P V +A   ++ +ITG+++ DEEG 
Sbjct: 3   VIQFIQGVNEDVIPDVRLTRSRDGSTGTATFRFANPKVLEAQSSVKGNITGMYLIDEEGQ 62

Query: 449 LSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
           L T DV+A+FVNGKP  IEA YIM++ +DWDRFMRFMERY+E NGL F K
Sbjct: 63  LVTRDVNARFVNGKPQGIEAVYIMQSKEDWDRFMRFMERYSEDNGLSFTK 112


>sp|Q5MZB9|PSB28_SYNP6 Photosystem II reaction center psb28 protein
           OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
           SAUG 1402/1) GN=psb28 PE=3 SV=1
          Length = 112

 Score =  135 bits (340), Expect = 2e-31
 Identities = 63/109 (57%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
 Frame = +2

Query: 275 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGVL 451
           IQF +G++E  +PDV LTRS+DG NG ATF F++P      GE+R DITG+++ D+EG L
Sbjct: 5   IQFTRGIDEPVVPDVRLTRSRDGQNGTATFYFDEPQAL--VGEVRQDITGMYLLDDEGEL 62

Query: 452 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
           +T +V AKF+NG+P+ +EA Y+MR+ ++WDRFMRFM+RYAEANGLGF +
Sbjct: 63  ATREVKAKFINGQPAGLEAVYLMRSPEEWDRFMRFMQRYAEANGLGFTE 111


>sp|Q31ML0|PSB28_SYNE7 Photosystem II reaction center psb28 protein
           OS=Synechococcus elongatus (strain PCC 7942) GN=psb28
           PE=3 SV=1
          Length = 112

 Score =  135 bits (340), Expect = 2e-31
 Identities = 63/109 (57%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
 Frame = +2

Query: 275 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGVL 451
           IQF +G++E  +PDV LTRS+DG NG ATF F++P      GE+R DITG+++ D+EG L
Sbjct: 5   IQFTRGIDEPVVPDVRLTRSRDGQNGTATFYFDEPQAL--VGEVRQDITGMYLLDDEGEL 62

Query: 452 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
           +T +V AKF+NG+P+ +EA Y+MR+ ++WDRFMRFM+RYAEANGLGF +
Sbjct: 63  ATREVKAKFINGQPAGLEAVYLMRSPEEWDRFMRFMQRYAEANGLGFTE 111


>sp|B0CE32|PSB28_ACAM1 Photosystem II reaction center psb28 protein
           OS=Acaryochloris marina (strain MBIC 11017) GN=psb28
           PE=3 SV=1
          Length = 111

 Score =  135 bits (339), Expect = 2e-31
 Identities = 66/108 (61%), Positives = 88/108 (81%)
 Frame = +2

Query: 275 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEGVLS 454
           IQFI+GV+E+ IPDV LTR+KDG++G A F FE P++    G+L ++ G+++QDEEG L+
Sbjct: 5   IQFIRGVDEEVIPDVRLTRAKDGSSGRAIFYFENPNLIQE-GKL-EVMGMYLQDEEGELT 62

Query: 455 TVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
           T+DVSAKFVNGKP  IEA Y M++ ++WDRFMRFM RYAE++GLGF K
Sbjct: 63  TLDVSAKFVNGKPHAIEANYDMKSEEEWDRFMRFMNRYAESHGLGFSK 110


>sp|A0T0H5|PSB28_PHATR Photosystem II reaction center psb28 protein
           OS=Phaeodactylum tricornutum GN=psb28 PE=3 SV=1
          Length = 115

 Score =  134 bits (337), Expect = 4e-31
 Identities = 64/109 (58%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
 Frame = +2

Query: 275 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFD-AAGELRDITGLFMQDEEGVL 451
           IQFIKG++E+ +PDV LTRSKDG+ G ATF F+ P++ D    +  +ITG+++ DEEG+L
Sbjct: 5   IQFIKGLDEKVLPDVRLTRSKDGSTGTATFRFKNPNILDKTTAKEGEITGMYLIDEEGIL 64

Query: 452 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
            T DV+A+FVNGKP  IE+ YIM++ + WDRFMRFMERY E NGL F K
Sbjct: 65  ETRDVNARFVNGKPEAIESIYIMKSPEAWDRFMRFMERYGETNGLVFSK 113


>sp|Q6B8Z7|PSB28_GRATL Photosystem II reaction center psb28 protein
           OS=Gracilaria tenuistipitata var. liui GN=psb28 PE=3
           SV=1
          Length = 114

 Score =  133 bits (335), Expect = 7e-31
 Identities = 63/110 (57%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
 Frame = +2

Query: 272 VIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGV 448
           VIQFIKG+NE  + DVSLTRS+DG+ G ATF F  P +  +  E + DITG++++D+EG 
Sbjct: 3   VIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILKSGMEDKGDITGMYLKDDEGE 62

Query: 449 LSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
           L T DVSAKF+NGKP  +EA YI+++ ++WDRFMRFME+YA  N L F K
Sbjct: 63  LMTRDVSAKFINGKPQAVEAIYIIKSPQEWDRFMRFMEKYANENKLSFTK 112


>sp|A0T0W9|PSB28_THAPS Photosystem II reaction center psb28 protein
           OS=Thalassiosira pseudonana GN=psb28 PE=3 SV=1
          Length = 114

 Score =  133 bits (334), Expect = 9e-31
 Identities = 63/109 (57%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
 Frame = +2

Query: 275 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGVL 451
           IQFIKG++E+ +PDV LTRS+DG+ G ATF F+  ++ + +  L  +ITG++M DEEG+L
Sbjct: 5   IQFIKGIDEKVLPDVRLTRSRDGSTGTATFLFKNANLINKSLALNGEITGMYMIDEEGIL 64

Query: 452 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
            T DVSA+FVNGKP  +E+ YIM++ + WDRFMRFMERY E+NGL F K
Sbjct: 65  ETRDVSARFVNGKPQAVESIYIMKSPEAWDRFMRFMERYGESNGLAFTK 113
tr_hit_id A9NPG6
Definition tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 protein OS=Picea sitchensis
Align length 117
Score (bit) 179.0
E-value 1.0e-43
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950702|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_G06, 5'
         (651 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 prot...   179   1e-43
tr|B6TYC5|B6TYC5_MAIZE Photosystem II reaction center W protein ...   179   2e-43
tr|B6SRI0|B6SRI0_MAIZE Photosystem II reaction center W protein ...   179   2e-43
tr|A9PHJ0|A9PHJ0_POPTR Photosystem II reaction center psb28 prot...   176   8e-43
tr|A3A1D0|A3A1D0_ORYSJ Photosystem II reaction center psb28 prot...   176   1e-42
tr|A2WYW0|A2WYW0_ORYSI Photosystem II reaction center psb28 prot...   176   1e-42
tr|A7Q1K3|A7Q1K3_VITVI Photosystem II reaction center psb28 prot...   175   2e-42
tr|A9TT51|A9TT51_PHYPA Photosystem II reaction center psb28 prot...   170   8e-41
tr|B6SKW1|B6SKW1_MAIZE Photosystem II reaction center W protein ...   166   1e-39
tr|A9SHP3|A9SHP3_PHYPA Photosystem II reaction center psb28 prot...   165   3e-39
tr|A4S851|A4S851_OSTLU Photosystem II reaction center psb28 prot...   153   1e-35
tr|A8III5|A8III5_CHLRE Photosystem II reaction center psb28 prot...   148   2e-34
tr|B8C304|B8C304_THAPS Nuclear copy of photosystem II protein ps...   138   3e-31
tr|A6MVQ3|A6MVQ3_RHDSA Photosystem II reaction center psb28 prot...   133   8e-30
tr|B4W337|B4W337_9CYAN Photosystem II reaction center protein Ps...   130   5e-29
tr|B7FMR0|B7FMR0_MEDTR Putative uncharacterized protein OS=Medic...   128   3e-28
tr|B1WXW2|B1WXW2_CYAA5 Photosystem II 13 kD protein OS=Cyanothec...   127   6e-28
tr|A3IN21|A3IN21_9CHRO Photosystem II reaction center psb28 prot...   127   6e-28
tr|B2J5G7|B2J5G7_NOSP7 Photosystem II protein PsbW, class I OS=N...   127   8e-28
tr|Q4BX83|Q4BX83_CROWT Photosystem II reaction center psb28 prot...   126   1e-27
tr|B7T1U3|B7T1U3_VAULI Photosystem II protein OS=Vaucheria litor...   125   2e-27
tr|A3YZV7|A3YZV7_9SYNE Photosystem II reaction center psb28 prot...   124   4e-27
tr|A0YUC0|A0YUC0_9CYAN Photosystem II reaction center psb28 prot...   124   6e-27
tr|B5W4B0|B5W4B0_SPIMA Photosystem II reaction center protein Ps...   122   1e-26
tr|B1XL01|B1XL01_SYNP2 Photosystem II reaction center W protein ...   122   2e-26
tr|B4WSH1|B4WSH1_9SYNE Photosystem II reaction center protein Ps...   120   5e-26
tr|B2XTK0|B2XTK0_HETA4 Photosystem II protein psb28 OS=Heterosig...   120   7e-26
tr|B2XT44|B2XT44_HETA2 Photosystem II protein psb28 OS=Heterosig...   120   7e-26
tr|B1X424|B1X424_PAUCH Putative photosystem II reaction center P...   120   9e-26
tr|A4CU97|A4CU97_SYNPV Photosystem II reaction center psb28 prot...   119   1e-25

>tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 protein
           OS=Picea sitchensis PE=2 SV=1
          Length = 202

 Score =  179 bits (455), Expect = 1e-43
 Identities = 87/117 (74%), Positives = 102/117 (87%)
 Frame = +2

Query: 251 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 430
           V  MSKPVIQFI+G NEQ+IPDV LT+S+DGT G+ATFSF+QPSVFD++ EL DITGL+M
Sbjct: 86  VTMMSKPVIQFIQGTNEQSIPDVKLTKSRDGTIGMATFSFDQPSVFDSSRELGDITGLYM 145

Query: 431 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 601
            DEEGVL +VDV+AKFVNGKPS IEARYIMR+  +WDRFMRFMERY+  NGL F+KK
Sbjct: 146 IDEEGVLQSVDVNAKFVNGKPSTIEARYIMRSPPEWDRFMRFMERYSNENGLQFIKK 202


>tr|B6TYC5|B6TYC5_MAIZE Photosystem II reaction center W protein
           OS=Zea mays PE=2 SV=1
          Length = 179

 Score =  179 bits (453), Expect = 2e-43
 Identities = 84/116 (72%), Positives = 102/116 (87%)
 Frame = +2

Query: 251 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 430
           V +  +P IQFI+G +EQTIPDV LT+S+DGTNGVA F+FEQPSVFD++ EL DITG +M
Sbjct: 63  VAAAVRPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGFYM 122

Query: 431 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
            D+EGVL +VDVSAKFVNGKP+RIEA+Y+MRT +DWDRFMRFMERY++ANGL FVK
Sbjct: 123 IDDEGVLQSVDVSAKFVNGKPARIEAKYVMRTPRDWDRFMRFMERYSQANGLQFVK 178


>tr|B6SRI0|B6SRI0_MAIZE Photosystem II reaction center W protein
           OS=Zea mays PE=2 SV=1
          Length = 180

 Score =  179 bits (453), Expect = 2e-43
 Identities = 84/116 (72%), Positives = 102/116 (87%)
 Frame = +2

Query: 251 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 430
           V +  +P IQFI+G +EQTIPDV LT+S+DGTNGVA F+FEQPSVFD++ EL DITG +M
Sbjct: 64  VAAAVRPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGFYM 123

Query: 431 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
            D+EGVL +VDVSAKFVNGKP+RIEA+Y+MRT +DWDRFMRFMERY++ANGL FVK
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPARIEAKYVMRTPRDWDRFMRFMERYSQANGLQFVK 179


>tr|A9PHJ0|A9PHJ0_POPTR Photosystem II reaction center psb28 protein
           OS=Populus trichocarpa PE=2 SV=1
          Length = 181

 Score =  176 bits (447), Expect = 8e-43
 Identities = 81/117 (69%), Positives = 101/117 (86%)
 Frame = +2

Query: 251 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 430
           V  M KP IQF++G +EQT+PDV LT+S+DGTNG+A F+F+QPSVFD++ E+ DITG +M
Sbjct: 65  VTMMVKPAIQFVQGADEQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDITGFYM 124

Query: 431 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 601
            DEEG+L +VDV+AKFVNGKP RIEA+YIMRT ++WDRFMRFME+YA ANGL FVKK
Sbjct: 125 IDEEGILQSVDVNAKFVNGKPERIEAKYIMRTPREWDRFMRFMEKYANANGLQFVKK 181


>tr|A3A1D0|A3A1D0_ORYSJ Photosystem II reaction center psb28 protein
           OS=Oryza sativa subsp. japonica GN=OsJ_004602 PE=2 SV=1
          Length = 180

 Score =  176 bits (446), Expect = 1e-42
 Identities = 82/117 (70%), Positives = 103/117 (88%)
 Frame = +2

Query: 251 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 430
           V+  ++P IQFI+G +EQTIPDV LT+S+DGTNGVA F+F+QPSVFD++ EL DITG +M
Sbjct: 64  VMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYM 123

Query: 431 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 601
            D+EGVL +VDVSAKFVNGKP+ IEA+Y+MRT ++WDRFMRFMERY++ANGL FVKK
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVKK 180


>tr|A2WYW0|A2WYW0_ORYSI Photosystem II reaction center psb28 protein
           OS=Oryza sativa subsp. indica GN=OsI_05122 PE=3 SV=1
          Length = 180

 Score =  176 bits (446), Expect = 1e-42
 Identities = 82/117 (70%), Positives = 103/117 (88%)
 Frame = +2

Query: 251 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 430
           V+  ++P IQFI+G +EQTIPDV LT+S+DGTNGVA F+F+QPSVFD++ EL DITG +M
Sbjct: 64  VMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYM 123

Query: 431 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 601
            D+EGVL +VDVSAKFVNGKP+ IEA+Y+MRT ++WDRFMRFMERY++ANGL FVKK
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVKK 180


>tr|A7Q1K3|A7Q1K3_VITVI Photosystem II reaction center psb28 protein
           OS=Vitis vinifera GN=GSVIVT00028499001 PE=3 SV=1
          Length = 179

 Score =  175 bits (444), Expect = 2e-42
 Identities = 81/117 (69%), Positives = 100/117 (85%)
 Frame = +2

Query: 251 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 430
           +  M KP IQFI+G +EQT+PDV LT+S+DGTNG+A F FEQPSVFD++GE+ DITG +M
Sbjct: 63  ITMMVKPTIQFIQGTDEQTVPDVRLTQSRDGTNGMAIFKFEQPSVFDSSGEVGDITGFYM 122

Query: 431 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 601
            DEEGVL +VDVSAKF+NGKPS IEA+Y+MR+ ++WDRFMRFMERY+  NGL FVKK
Sbjct: 123 IDEEGVLQSVDVSAKFINGKPSGIEAKYVMRSPREWDRFMRFMERYSNENGLQFVKK 179


>tr|A9TT51|A9TT51_PHYPA Photosystem II reaction center psb28 protein
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_61027 PE=3 SV=1
          Length = 115

 Score =  170 bits (430), Expect = 8e-41
 Identities = 80/111 (72%), Positives = 98/111 (88%)
 Frame = +2

Query: 266 KPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEG 445
           KPV+QFI+GV+E+++P++ LTRS DGTNG A F F+QPSVFD++ EL DITGL+M DEEG
Sbjct: 4   KPVLQFIRGVDERSVPEIRLTRSPDGTNGKAIFVFDQPSVFDSSRELGDITGLYMLDEEG 63

Query: 446 VLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
           VLSTVDVSAKF+NGKPS+IE++YIMR   +WDRFMRFMERYA+ N LGFVK
Sbjct: 64  VLSTVDVSAKFLNGKPSKIESQYIMRNTTEWDRFMRFMERYAKENQLGFVK 114


>tr|B6SKW1|B6SKW1_MAIZE Photosystem II reaction center W protein
           OS=Zea mays PE=2 SV=1
          Length = 185

 Score =  166 bits (420), Expect = 1e-39
 Identities = 76/117 (64%), Positives = 99/117 (84%)
 Frame = +2

Query: 251 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 430
           +  M KP +QFI+G +E TIPDV LTRS+DG+NG+A FSF+QPSVFD++GE+ +ITGL+M
Sbjct: 68  ITMMVKPTLQFIQGTDELTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYM 127

Query: 431 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVKK 601
            DEEGV+ + DV+A+FVNGKP  I A+++MRT K+WDRFMRFMERY++ NGL FVKK
Sbjct: 128 IDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKK 184


>tr|A9SHP3|A9SHP3_PHYPA Photosystem II reaction center psb28 protein
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_57848 PE=3 SV=1
          Length = 115

 Score =  165 bits (417), Expect = 3e-39
 Identities = 77/111 (69%), Positives = 96/111 (86%)
 Frame = +2

Query: 266 KPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEG 445
           KPVIQFI+GV+E+ +P++ LTRS +GTNG A F F+QPSVFDA+ EL DITGL++ DEEG
Sbjct: 4   KPVIQFIRGVDERVVPEIRLTRSPNGTNGKAIFVFDQPSVFDASRELGDITGLYLVDEEG 63

Query: 446 VLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFMERYAEANGLGFVK 598
            LSTV+VSAKF+NGKPS+IE++Y+MR   +WDRFMRFMERYA+ N LGFVK
Sbjct: 64  TLSTVEVSAKFLNGKPSKIESQYVMRNTTEWDRFMRFMERYAKENQLGFVK 114