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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950713
Clone id TST38A01NGRL0009_G17
Library
Length 633
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_G17. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
ATCGATATAAAGACAATGAAGGTAAGGTAGAAAGCCCAGTAGCTCTCGTTATTCCTTCAC
TTTGGACCAATATATGCTGGTACGCTGAGCCCTAGCGAAGCAGAGAAACCACGAAGAACA
GACAGGCGACGCGATGAGCAAGAGTCTAGGTATCCCCGTGAAGCTGTTGCACGAAGCGGA
GGGCCACACAGTCTCCATCGAGCTGAAAAGCGGGGAGCTCTACCGCGGCTCCCTCATCGA
ATGCGAGGATAATTGGAACTGTCAACTCGAGAACATCACCTACACCGCCAAGGATGGTCG
AGTTTCGCAGCTTGAGCATGTCTTCATCCGCGGTAGTAAAGTTAGGTTCATGATTATTCC
TGATATTTTTTTTACCCCCCCCCCCCTCAAGCGCTTGGATGCCAAGAAAAAAGGGGGGGG
GGCAGCAGGCATTGGTGTTGGGCGTGGGCGTGTTGCAGCTCTTCGAGCCAAGGCTCGGGC
GCCGGGAACTGCGGTGCCAGGCAGAGGTGCTGCACCTGTTCGAAGATAGATGAGGATCGT
GCTTGGATGTTCTGACTAGCGGAGGTTAATGTCTTCACCAATGTCGTATTAAAATCACTA
CCCCTGAAGCTCCNGCGAAGTCTCCTCTTTTGC
■■Homology search results ■■ -
sp_hit_id P62323
Definition sp|P62323|SMD3_XENLA Small nuclear ribonucleoprotein Sm D3 OS=Xenopus laevis
Align length 82
Score (bit) 115.0
E-value 2.0e-25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950713|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_G17, 5'
         (633 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P62323|SMD3_XENLA Small nuclear ribonucleoprotein Sm D3 OS=Xe...   115   2e-25
sp|P62320|SMD3_MOUSE Small nuclear ribonucleoprotein Sm D3 OS=Mu...   115   2e-25
sp|P62318|SMD3_HUMAN Small nuclear ribonucleoprotein Sm D3 OS=Ho...   115   2e-25
sp|O44437|SMD3_DROME Small nuclear ribonucleoprotein Sm D3 OS=Dr...   107   7e-23
sp|Q17348|SMD3_CAEEL Small nuclear ribonucleoprotein Sm D3 OS=Ca...   103   6e-22
sp|Q9UUC6|SMD3_SCHPO Probable small nuclear ribonucleoprotein Sm...   100   8e-21
sp|P43321|SMD3_YEAST Small nuclear ribonucleoprotein Sm D3 OS=Sa...    89   2e-17
sp|Q9ZRU9|LSM4_FAGSY Probable U6 snRNA-associated Sm-like protei...    63   1e-09
sp|Q54KX4|LSM4_DICDI Probable U6 snRNA-associated Sm-like protei...    63   1e-09
sp|Q43582|LSM4_TOBAC Probable U6 snRNA-associated Sm-like protei...    62   3e-09
sp|Q9LGE6|LSM4_ORYSJ Probable U6 snRNA-associated Sm-like protei...    61   5e-09
sp|Q9QXA5|LSM4_MOUSE U6 snRNA-associated Sm-like protein LSm4 OS...    60   9e-09
sp|Q9Y4Z0|LSM4_HUMAN U6 snRNA-associated Sm-like protein LSm4 OS...    60   9e-09
sp|Q3ZBK6|LSM4_BOVIN U6 snRNA-associated Sm-like protein LSm4 OS...    60   9e-09
sp|Q19952|LSM4_CAEEL Probable U6 snRNA-associated Sm-like protei...    59   3e-08
sp|O14352|LSM4_SCHPO Probable U6 snRNA-associated Sm-like protei...    50   7e-06
sp|P62315|SMD1_MOUSE Small nuclear ribonucleoprotein Sm D1 OS=Mu...    47   6e-05
sp|Q4R5F6|SMD1_MACFA Small nuclear ribonucleoprotein Sm D1 OS=Ma...    47   6e-05
sp|P62314|SMD1_HUMAN Small nuclear ribonucleoprotein Sm D1 OS=Ho...    47   6e-05
sp|Q3ZC10|SMD1_BOVIN Small nuclear ribonucleoprotein Sm D1 OS=Bo...    47   6e-05
sp|O42661|SMD1_SCHPO Probable small nuclear ribonucleoprotein Sm...    47   1e-04
sp|Q8QZX5|LSM10_MOUSE U7 snRNA-associated Sm-like protein LSm10 ...    45   2e-04
sp|Q10013|SMD1_CAEEL Probable small nuclear ribonucleoprotein Sm...    45   3e-04
sp|P40070|LSM4_YEAST U6 snRNA-associated Sm-like protein LSm4 OS...    45   3e-04
sp|Q9VU02|SMD1_DROME Probable small nuclear ribonucleoprotein Sm...    45   4e-04
sp|Q969L4|LSM10_HUMAN U7 snRNA-associated Sm-like protein LSm10 ...    41   0.004
sp|A4RQ29|LSM6_MAGGR U6 snRNA-associated Sm-like protein LSm6 OS...    35   0.42 
sp|Q0UWI9|LSM6_PHANO U6 snRNA-associated Sm-like protein LSm6 OS...    34   0.55 
sp|Q2HAN0|LSM6_CHAGB U6 snRNA-associated Sm-like protein LSm6 OS...    34   0.72 
sp|O94408|LSM2_SCHPO U6 snRNA-associated Sm-like protein LSm2 OS...    33   0.93 

>sp|P62323|SMD3_XENLA Small nuclear ribonucleoprotein Sm D3
           OS=Xenopus laevis GN=snrpd3 PE=2 SV=1
          Length = 126

 Score =  115 bits (287), Expect = 2e-25
 Identities = 51/82 (62%), Positives = 66/82 (80%)
 Frame = +2

Query: 143 SLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQLEHV 322
           S+G+P+K+LHEAEGH V+ E  +GE+YRG LIE EDN NCQ+ NIT T +DGRV+QLE V
Sbjct: 2   SIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQV 61

Query: 323 FIRGSKVRFMIIPDIFFTPPPL 388
           +IRGSK+RF+I+PD+    P L
Sbjct: 62  YIRGSKIRFLILPDMLKNAPML 83


>sp|P62320|SMD3_MOUSE Small nuclear ribonucleoprotein Sm D3 OS=Mus
           musculus GN=Snrpd3 PE=2 SV=1
          Length = 126

 Score =  115 bits (287), Expect = 2e-25
 Identities = 51/82 (62%), Positives = 66/82 (80%)
 Frame = +2

Query: 143 SLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQLEHV 322
           S+G+P+K+LHEAEGH V+ E  +GE+YRG LIE EDN NCQ+ NIT T +DGRV+QLE V
Sbjct: 2   SIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQV 61

Query: 323 FIRGSKVRFMIIPDIFFTPPPL 388
           +IRGSK+RF+I+PD+    P L
Sbjct: 62  YIRGSKIRFLILPDMLKNAPML 83


>sp|P62318|SMD3_HUMAN Small nuclear ribonucleoprotein Sm D3 OS=Homo
           sapiens GN=SNRPD3 PE=1 SV=1
          Length = 126

 Score =  115 bits (287), Expect = 2e-25
 Identities = 51/82 (62%), Positives = 66/82 (80%)
 Frame = +2

Query: 143 SLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQLEHV 322
           S+G+P+K+LHEAEGH V+ E  +GE+YRG LIE EDN NCQ+ NIT T +DGRV+QLE V
Sbjct: 2   SIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQV 61

Query: 323 FIRGSKVRFMIIPDIFFTPPPL 388
           +IRGSK+RF+I+PD+    P L
Sbjct: 62  YIRGSKIRFLILPDMLKNAPML 83


>sp|O44437|SMD3_DROME Small nuclear ribonucleoprotein Sm D3
           OS=Drosophila melanogaster GN=SmD3 PE=2 SV=1
          Length = 151

 Score =  107 bits (266), Expect = 7e-23
 Identities = 46/80 (57%), Positives = 63/80 (78%)
 Frame = +2

Query: 143 SLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQLEHV 322
           S+G+P+K+LHEAEGH ++ E  +GE+YRG LIE EDN NCQ+  IT T +DGR + LE+V
Sbjct: 2   SIGVPIKVLHEAEGHIITCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDGRTANLENV 61

Query: 323 FIRGSKVRFMIIPDIFFTPP 382
           +IRGSK+RF+I+PD+    P
Sbjct: 62  YIRGSKIRFLILPDMLKNAP 81


>sp|Q17348|SMD3_CAEEL Small nuclear ribonucleoprotein Sm D3
           OS=Caenorhabditis elegans GN=snr-1 PE=2 SV=2
          Length = 136

 Score =  103 bits (258), Expect = 6e-22
 Identities = 46/80 (57%), Positives = 61/80 (76%)
 Frame = +2

Query: 143 SLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQLEHV 322
           S+G+P+K+LHEAEGH V++E  +GE+YRG L E EDN NCQL     T +DGR  QL++V
Sbjct: 3   SVGVPIKILHEAEGHMVTLETVTGEVYRGKLSEAEDNMNCQLAETVVTFRDGRSHQLDNV 62

Query: 323 FIRGSKVRFMIIPDIFFTPP 382
           FIRG+K+RFMI+PD+    P
Sbjct: 63  FIRGNKIRFMILPDMLKNAP 82


>sp|Q9UUC6|SMD3_SCHPO Probable small nuclear ribonucleoprotein Sm D3
           OS=Schizosaccharomyces pombe GN=smd3 PE=2 SV=1
          Length = 97

 Score =  100 bits (248), Expect = 8e-21
 Identities = 43/79 (54%), Positives = 61/79 (77%)
 Frame = +2

Query: 146 LGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQLEHVF 325
           + + +KLLHE +GH V++EL++G  YRG LIE EDN NCQ+ +I+ TA+DGRVS L+ V+
Sbjct: 1   MSLCIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRDISVTARDGRVSHLDQVY 60

Query: 326 IRGSKVRFMIIPDIFFTPP 382
           IRGS +RF+I+PD+    P
Sbjct: 61  IRGSHIRFLIVPDMLRNAP 79


>sp|P43321|SMD3_YEAST Small nuclear ribonucleoprotein Sm D3
           OS=Saccharomyces cerevisiae GN=SMD3 PE=1 SV=1
          Length = 101

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 37/78 (47%), Positives = 57/78 (73%)
 Frame = +2

Query: 149 GIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQLEHVFI 328
           GIPVKLL+EA+GH VS+EL +G  YRG L+E ED+ N QL ++  T   G V+ ++ +F+
Sbjct: 5   GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64

Query: 329 RGSKVRFMIIPDIFFTPP 382
           RGS+++F+++PD+    P
Sbjct: 65  RGSQIKFIVVPDLLKNAP 82


>sp|Q9ZRU9|LSM4_FAGSY Probable U6 snRNA-associated Sm-like protein
           LSm4 OS=Fagus sylvatica GN=LSM4 PE=2 SV=1
          Length = 148

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +2

Query: 152 IPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDG-RVSQLEHVFI 328
           +P+ LL  A+GH + +ELKSGE Y G L+ C+   N  L  +  T+KDG R  ++   +I
Sbjct: 2   LPLSLLKTAQGHPMLVELKSGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPDCYI 61

Query: 329 RGSKVRFMIIPD 364
           RG+ ++++ +PD
Sbjct: 62  RGNTIKYLRVPD 73


>sp|Q54KX4|LSM4_DICDI Probable U6 snRNA-associated Sm-like protein
           LSm4 OS=Dictyostelium discoideum GN=lsm4 PE=3 SV=1
          Length = 177

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 28/73 (38%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
 Frame = +2

Query: 152 IPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNW-NCQLENITYTAKDG-RVSQLEHVF 325
           +P+ LL   +GH + +ELK+GE Y G L+ C DNW N  L+N+  T+KD  +  +++  +
Sbjct: 2   LPLSLLRTGQGHQIMVELKNGETYNGLLVNC-DNWMNINLKNVIRTSKDSDKFWKIQSCY 60

Query: 326 IRGSKVRFMIIPD 364
           IRG+ ++++ +PD
Sbjct: 61  IRGNTIKYISVPD 73


>sp|Q43582|LSM4_TOBAC Probable U6 snRNA-associated Sm-like protein
           LSm4 OS=Nicotiana tabacum PE=2 SV=1
          Length = 146

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +2

Query: 152 IPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDG-RVSQLEHVFI 328
           +P+ LL  A+GH + +ELK+GE Y G L+ C+   N  L  +  T+KDG R  ++   ++
Sbjct: 2   LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYV 61

Query: 329 RGSKVRFMIIPD 364
           RG+ ++++ +PD
Sbjct: 62  RGNTIKYLRVPD 73
tr_hit_id Q9LM92
Definition tr|Q9LM92|Q9LM92_ARATH F2D10.7 (At1g20580/F2D10_6) OS=Arabidopsis thaliana
Align length 83
Score (bit) 149.0
E-value 1.0e-34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950713|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_G17, 5'
         (633 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9LM92|Q9LM92_ARATH F2D10.7 (At1g20580/F2D10_6) OS=Arabidopsi...   149   1e-34
tr|Q8LC48|Q8LC48_ARATH Small nuclear ribonucleoprotein, putative...   149   1e-34
tr|B8LQI0|B8LQI0_PICSI Putative uncharacterized protein OS=Picea...   147   4e-34
tr|A9NMM7|A9NMM7_PICSI Putative uncharacterized protein OS=Picea...   147   4e-34
tr|A9RWN4|A9RWN4_PHYPA Predicted protein OS=Physcomitrella paten...   147   5e-34
tr|B6UGP6|B6UGP6_MAIZE Small nuclear ribonucleoprotein Sm D3 OS=...   147   7e-34
tr|B6UG34|B6UG34_MAIZE Small nuclear ribonucleoprotein Sm D3 OS=...   147   7e-34
tr|B6UDW2|B6UDW2_MAIZE Small nuclear ribonucleoprotein Sm D3 OS=...   147   7e-34
tr|Q9S7E6|Q9S7E6_ARATH T23E18.23 (Small nuclear ribonucleoprotei...   146   9e-34
tr|B4FNH4|B4FNH4_MAIZE Putative uncharacterized protein OS=Zea m...   146   1e-33
tr|B4FKA5|B4FKA5_MAIZE Putative uncharacterized protein OS=Zea m...   146   1e-33
tr|Q6YU78|Q6YU78_ORYSJ Os02g0102700 protein OS=Oryza sativa subs...   145   3e-33
tr|B8AGV3|B8AGV3_ORYSI Putative uncharacterized protein OS=Oryza...   145   3e-33
tr|A7QPB5|A7QPB5_VITVI Chromosome chr18 scaffold_137, whole geno...   145   3e-33
tr|A3A261|A3A261_ORYSJ Putative uncharacterized protein OS=Oryza...   145   3e-33
tr|Q10PA9|Q10PA9_ORYSJ Os03g0240800 protein OS=Oryza sativa subs...   144   6e-33
tr|A3AFY2|A3AFY2_ORYSJ Putative uncharacterized protein OS=Oryza...   144   6e-33
tr|A2XEE2|A2XEE2_ORYSI Putative uncharacterized protein OS=Oryza...   144   6e-33
tr|A5ALZ4|A5ALZ4_VITVI Putative uncharacterized protein OS=Vitis...   142   1e-32
tr|A7PSI3|A7PSI3_VITVI Chromosome chr6 scaffold_28, whole genome...   142   2e-32
tr|A9RJD3|A9RJD3_PHYPA Predicted protein OS=Physcomitrella paten...   139   1e-31
tr|A5C078|A5C078_VITVI Putative uncharacterized protein OS=Vitis...   138   3e-31
tr|Q9LMW6|Q9LMW6_ARATH F5M15.9 OS=Arabidopsis thaliana PE=4 SV=1      135   2e-30
tr|A8I0E2|A8I0E2_CHLRE Small nuclear ribonucleoprotein OS=Chlamy...   120   7e-26
tr|B6LKY3|B6LKY3_BRAFL Putative uncharacterized protein OS=Branc...   119   1e-25
tr|Q86L45|Q86L45_DICDI Similar to expressed protein; protein id:...   119   2e-25
tr|A7RM92|A7RM92_NEMVE Predicted protein OS=Nematostella vectens...   119   2e-25
tr|A4RTS7|A4RTS7_OSTLU Predicted protein (Fragment) OS=Ostreococ...   119   2e-25
tr|Q7ZVB5|Q7ZVB5_DANRE Small nuclear ribonucleoprotein D3 polype...   116   1e-24
tr|Q8AVZ5|Q8AVZ5_XENLA MGC52856 protein OS=Xenopus laevis GN=MGC...   115   2e-24

>tr|Q9LM92|Q9LM92_ARATH F2D10.7 (At1g20580/F2D10_6) OS=Arabidopsis
           thaliana GN=At1g20580 PE=2 SV=1
          Length = 131

 Score =  149 bits (377), Expect = 1e-34
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = +2

Query: 134 MSKSLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQL 313
           MS+SLGIPVKLLHEA GH V++ELKSGELYRGS+IECEDNWNCQLE+ITYTAKDG+VSQL
Sbjct: 1   MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGKVSQL 60

Query: 314 EHVFIRGSKVRFMIIPDIFFTPP 382
           EHVFIRGSKVRFM+IPDI    P
Sbjct: 61  EHVFIRGSKVRFMVIPDILKHAP 83


>tr|Q8LC48|Q8LC48_ARATH Small nuclear ribonucleoprotein, putative
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 131

 Score =  149 bits (377), Expect = 1e-34
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = +2

Query: 134 MSKSLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQL 313
           MS+SLGIPVKLLHEA GH V++ELKSGELYRGS+IECEDNWNCQLE+ITYTAKDG+VSQL
Sbjct: 1   MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGKVSQL 60

Query: 314 EHVFIRGSKVRFMIIPDIFFTPP 382
           EHVFIRGSKVRFM+IPDI    P
Sbjct: 61  EHVFIRGSKVRFMVIPDILKHAP 83


>tr|B8LQI0|B8LQI0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 133

 Score =  147 bits (372), Expect = 4e-34
 Identities = 68/83 (81%), Positives = 76/83 (91%)
 Frame = +2

Query: 134 MSKSLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQL 313
           MS+SLGIPVKLLHEA GH V++ELKSGELYRG++IECEDNWNCQLE ITYTAKDG+VSQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLEGITYTAKDGKVSQL 60

Query: 314 EHVFIRGSKVRFMIIPDIFFTPP 382
           EHVFIRGSKVRFM+IPD+    P
Sbjct: 61  EHVFIRGSKVRFMVIPDMLRNAP 83


>tr|A9NMM7|A9NMM7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 133

 Score =  147 bits (372), Expect = 4e-34
 Identities = 68/83 (81%), Positives = 76/83 (91%)
 Frame = +2

Query: 134 MSKSLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQL 313
           MS+SLGIPVKLLHEA GH V++ELKSGELYRG++IECEDNWNCQLE ITYTAKDG+VSQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLEGITYTAKDGKVSQL 60

Query: 314 EHVFIRGSKVRFMIIPDIFFTPP 382
           EHVFIRGSKVRFM+IPD+    P
Sbjct: 61  EHVFIRGSKVRFMVIPDMLRNAP 83


>tr|A9RWN4|A9RWN4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_161443 PE=4 SV=1
          Length = 137

 Score =  147 bits (371), Expect = 5e-34
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = +2

Query: 134 MSKSLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQL 313
           MSKSLGIPVKLLHEAEGH V++ELKSGE+YRGSLIECEDNWN QLE+ITYTAKDG+VSQL
Sbjct: 1   MSKSLGIPVKLLHEAEGHIVTVELKSGEVYRGSLIECEDNWNSQLESITYTAKDGKVSQL 60

Query: 314 EHVFIRGSKVRFMIIPDIFFTPP 382
           EHVFIRGSKVR+MIIPD+    P
Sbjct: 61  EHVFIRGSKVRYMIIPDMLKNAP 83


>tr|B6UGP6|B6UGP6_MAIZE Small nuclear ribonucleoprotein Sm D3 OS=Zea
           mays PE=2 SV=1
          Length = 132

 Score =  147 bits (370), Expect = 7e-34
 Identities = 67/83 (80%), Positives = 77/83 (92%)
 Frame = +2

Query: 134 MSKSLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQL 313
           MS+SLGIPVKLLHEA GH V++ELK+GE+YRGSL+ECEDNWNCQLENIT+TAKDG+VSQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDGKVSQL 60

Query: 314 EHVFIRGSKVRFMIIPDIFFTPP 382
           EHVFIRGS+VRFMIIPD+    P
Sbjct: 61  EHVFIRGSRVRFMIIPDMLKNAP 83


>tr|B6UG34|B6UG34_MAIZE Small nuclear ribonucleoprotein Sm D3 OS=Zea
           mays PE=2 SV=1
          Length = 132

 Score =  147 bits (370), Expect = 7e-34
 Identities = 67/83 (80%), Positives = 77/83 (92%)
 Frame = +2

Query: 134 MSKSLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQL 313
           MS+SLGIPVKLLHEA GH V++ELK+GE+YRGSL+ECEDNWNCQLENIT+TAKDG+VSQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDGKVSQL 60

Query: 314 EHVFIRGSKVRFMIIPDIFFTPP 382
           EHVFIRGS+VRFMIIPD+    P
Sbjct: 61  EHVFIRGSRVRFMIIPDMLKNAP 83


>tr|B6UDW2|B6UDW2_MAIZE Small nuclear ribonucleoprotein Sm D3 OS=Zea
           mays PE=2 SV=1
          Length = 132

 Score =  147 bits (370), Expect = 7e-34
 Identities = 67/83 (80%), Positives = 77/83 (92%)
 Frame = +2

Query: 134 MSKSLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQL 313
           MS+SLGIPVKLLHEA GH V++ELK+GE+YRGSL+ECEDNWNCQLENIT+TAKDG+VSQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSLVECEDNWNCQLENITFTAKDGKVSQL 60

Query: 314 EHVFIRGSKVRFMIIPDIFFTPP 382
           EHVFIRGS+VRFMIIPD+    P
Sbjct: 61  EHVFIRGSRVRFMIIPDMLKNAP 83


>tr|Q9S7E6|Q9S7E6_ARATH T23E18.23 (Small nuclear ribonucleoprotein,
           putative) (At1g76300/F15M4_20) (Putative small nuclear
           ribonucleoprotein Sm D3; 79504-78381) OS=Arabidopsis
           thaliana GN=F15M4.20 PE=2 SV=1
          Length = 128

 Score =  146 bits (369), Expect = 9e-34
 Identities = 67/83 (80%), Positives = 76/83 (91%)
 Frame = +2

Query: 134 MSKSLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQL 313
           MS+SLGIPVKLLHE+ GH VS+E+KSGELYRGS+IECEDNWNCQLENITYTAKDG+VSQL
Sbjct: 1   MSRSLGIPVKLLHESSGHIVSVEMKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL 60

Query: 314 EHVFIRGSKVRFMIIPDIFFTPP 382
           EHVFIRGS VRF++IPD+    P
Sbjct: 61  EHVFIRGSLVRFLVIPDMLKNAP 83


>tr|B4FNH4|B4FNH4_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 132

 Score =  146 bits (368), Expect = 1e-33
 Identities = 66/83 (79%), Positives = 77/83 (92%)
 Frame = +2

Query: 134 MSKSLGIPVKLLHEAEGHTVSIELKSGELYRGSLIECEDNWNCQLENITYTAKDGRVSQL 313
           MS+SLGIPVKLLHEA GH V++ELK+GE+YRGS++ECEDNWNCQLENIT+TAKDG+VSQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL 60

Query: 314 EHVFIRGSKVRFMIIPDIFFTPP 382
           EHVFIRGS+VRFMIIPD+    P
Sbjct: 61  EHVFIRGSRVRFMIIPDMLKNAP 83