DK950719 |
Clone id |
TST38A01NGRL0009_G23 |
Library |
TST38 |
Length |
655 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_G23. 5' end sequence. |
Accession |
DK950719 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3426Contig1 |
Sequence |
GGTGAGCAGAGCAGGCGAGGCGATGGTGAAATCCCGGCGCCTCTCTCCTGCTGCTGCGTC TTCGTCCTCCCCCTTCTCCAGCTCAACTTCGCCATCGCCAGCGGCCTCCCTGTCGCTTAT ATCCAACCCTCCCCTTCTCAAGCCTTCGACAGCCGCGTGCACGCCCTTCATTTCCTCCCT CAAGCGCTGCCCTCTTCTGGATGTGAACTCAGACTTGTCGGCGCTCACTATTGCTGAAGG CGGAGGCCAGCCAGACGGAAAAAGTGCAGCGCCACCCCAGGTTTCTGATGCAGGCGCATG TGGGCATGAGAGGTTATGCGGCAGGGCAAGGCTTCAGCATCATTGGGTGCAGGTGGGAGG CAAGGTTATGATTCCGGACAACTGGGGCTTGGAGAGGCATCTGCAGGAATGGGTGAGTTT TGGACTGCTAGAGGACGCTTACAGACCTGCAGGGCTGATGTCCGCCAGGTCCGCCCTTGT CGCAGACTGCCAACGTCGGTCCCGAGGGGGCATGTCCTCGTCTCAGCAGCCCGCTCCTCA GCTTCTGACAGTGCCCTCTGCTGATCCGGTTCAATTAAGCAGCTGTGGCTGAGATAAGAG TTTTTGCCCACTTTATGATGTGGTTGTCTCCCATTTTTGGGTTGTATATTGCAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9VA70 |
Definition |
sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogaster |
Align length |
55 |
Score (bit) |
32.7 |
E-value |
1.7 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950719|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_G23, 5' (655 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogas... 33 1.7 sp|Q9SS90|RGLG1_ARATH E3 ubiquitin-protein ligase RGLG1 OS=Arabi... 32 2.2 sp|O75128|COBL_HUMAN Protein cordon-bleu OS=Homo sapiens GN=COBL... 32 2.2 sp|Q29C43|NCASE_DROPS Neutral ceramidase OS=Drosophila pseudoobs... 32 2.9 sp|Q9D4H4|AMOL1_MOUSE Angiomotin-like protein 1 OS=Mus musculus ... 32 2.9 sp|Q7T2U9|TFCP2_CHICK Transcription factor CP2 OS=Gallus gallus ... 32 3.8 sp|Q9ERA0|TFCP2_MOUSE Alpha-globin transcription factor CP2 OS=M... 31 6.5 sp|Q12800|TFCP2_HUMAN Alpha-globin transcription factor CP2 OS=H... 31 6.5 sp|Q39UG0|PDXJ_GEOMG Pyridoxine 5'-phosphate synthase OS=Geobact... 31 6.5 sp|Q90358|PA2I_CRODU Gamma-phospholipase A2 inhibitor CNF OS=Cro... 31 6.5 sp|Q7TPH6|MYCB2_MOUSE Probable E3 ubiquitin-protein ligase MYCBP... 30 8.5 sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP... 30 8.5
>sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogaster GN=CDase PE=1 SV=1 Length = 704
Score = 32.7 bits (73), Expect = 1.7 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 10/55 (18%) Frame = -2
Query: 273 GAALFPSGWPPP----------SAIVSADKSEFTSRRGQRLREEMKGVHAAVEGL 139 G A FP W P I++A EFT+ G+RLR +++ +AV G+ Sbjct: 439 GRATFPYEWQPKIVSDQLLKIGDVIIAAVPCEFTTMAGRRLRNQIRAAASAVGGI 493
>sp|Q9SS90|RGLG1_ARATH E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1 Length = 489
Score = 32.3 bits (72), Expect = 2.2 Identities = 20/63 (31%), Positives = 31/63 (49%) Frame = -2
Query: 300 HAPASETWGGAALFPSGWPPPSAIVSADKSEFTSRRGQRLREEMKGVHAAVEGLRRGGLD 121 H + E + AA P+ PPPS AD+ +F RR ++ + + E L R GL+ Sbjct: 95 HQYSQEGYASAASQPNYPPPPSQSQVADRKKF-DRRYSKISDNYSSLLQVSEALGRAGLE 153
Query: 120 ISD 112 S+ Sbjct: 154 SSN 156
>sp|O75128|COBL_HUMAN Protein cordon-bleu OS=Homo sapiens GN=COBL PE=1 SV=2 Length = 1261
Score = 32.3 bits (72), Expect = 2.2 Identities = 21/65 (32%), Positives = 25/65 (38%) Frame = +2
Query: 209 SDLSALTIAEGGGQPDGKSAAPPQVSDAGACGHERLCGRARLQHHWVQVGGKVMIPDNWG 388 S A + +E PDG PP SD AC E + G R H G P G Sbjct: 1002 SSQEASSASEPRRAPDGTDPPPPHTSDTQACSRELVNGSVRAPGH----GEPSHPPGGSG 1057
Query: 389 LERHL 403 E H+ Sbjct: 1058 TESHI 1062
>sp|Q29C43|NCASE_DROPS Neutral ceramidase OS=Drosophila pseudoobscura pseudoobscura GN=CDase PE=3 SV=1 Length = 704
Score = 32.0 bits (71), Expect = 2.9 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 10/55 (18%) Frame = -2
Query: 273 GAALFPSGWPPP----------SAIVSADKSEFTSRRGQRLREEMKGVHAAVEGL 139 G A FP W P I++A EFT+ G+RLR +++ +A GL Sbjct: 439 GRATFPYEWQPKIVSDQLLKIGDVIIAAVPCEFTTMAGRRLRNQIRAAASAAGGL 493
>sp|Q9D4H4|AMOL1_MOUSE Angiomotin-like protein 1 OS=Mus musculus GN=Amotl1 PE=2 SV=1 Length = 882
Score = 32.0 bits (71), Expect = 2.9 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 17/114 (14%) Frame = -1
Query: 574 LNRISRGHCQKLRSGLLR--------RGHAPSGPTLAVCDKGG-PGGHQP-CRSVSVL*Q 425 L + +GH + L +++ + H PS GG P QP C+++ Sbjct: 176 LKELKQGHVRSLSERIMQLSLERNGAKQHLPSSGNGKSFKAGGEPSPAQPVCKALDPRGP 235
Query: 424 SKTHPFLQMPLQAPVVRN--HNL-ASHLHP----MMLKPCPAA*PLMPTCACIR 284 +PF P+++PV +N H L + HP M+KP PA P A +R Sbjct: 236 PPEYPFKTKPMKSPVSKNQDHGLYYNDQHPGVLHEMVKPYPAPQPARTEVAVLR 289
>sp|Q7T2U9|TFCP2_CHICK Transcription factor CP2 OS=Gallus gallus GN=TFCP2 PE=2 SV=1 Length = 496
Score = 31.6 bits (70), Expect = 3.8 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +2
Query: 158 CTPF--ISSLKRCPLLDVNSDLSALTIAEGGGQPDGKSAAPPQVSD 289 C+P+ I+ + P NS S+ +I EG G P+ + PP ++D Sbjct: 277 CSPWPEITYVNNAPSPGFNSSHSSFSIGEGNGSPNHQPEPPPPIAD 322
>sp|Q9ERA0|TFCP2_MOUSE Alpha-globin transcription factor CP2 OS=Mus musculus GN=Tcfcp2 PE=1 SV=1 Length = 502
Score = 30.8 bits (68), Expect = 6.5 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +2
Query: 158 CTPF--ISSLKRCPLLDVNSDLSALTIAEGGGQPDGKSAAPPQVSD 289 C+P+ I+ + P NS S+ ++ EG G P+ + PP V+D Sbjct: 277 CSPWPEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTD 322
>sp|Q12800|TFCP2_HUMAN Alpha-globin transcription factor CP2 OS=Homo sapiens GN=TFCP2 PE=1 SV=2 Length = 502
Score = 30.8 bits (68), Expect = 6.5 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +2
Query: 158 CTPF--ISSLKRCPLLDVNSDLSALTIAEGGGQPDGKSAAPPQVSD 289 C+P+ I+ + P NS S+ ++ EG G P+ + PP V+D Sbjct: 277 CSPWPEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTD 322
>sp|Q39UG0|PDXJ_GEOMG Pyridoxine 5'-phosphate synthase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pdxJ PE=3 SV=1 Length = 239
Score = 30.8 bits (68), Expect = 6.5 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -2
Query: 246 PPPSAIVSADKSEFTSRRGQRLREEMKGVHAAVEGLRRGGLDIS 115 P +V + E T+ G +R M+G+ AVE L+ GG+ +S Sbjct: 86 PDMCTLVPEKRQELTTEGGLDVRIAMQGIAEAVERLQNGGIAVS 129
>sp|Q90358|PA2I_CRODU Gamma-phospholipase A2 inhibitor CNF OS=Crotalus durissus terrificus PE=1 SV=1 Length = 200
Score = 30.8 bits (68), Expect = 6.5 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = +1
Query: 331 ASASLGAGGRQGYDSGQLGLGEASAGMGEFWTARGRLQTCRADVRQVRPCRRLPTSVPRG 510 AS S+ + + S LG+ +G RGR+ C ++ + +P LP S P G Sbjct: 56 ASLSVRTVHKNCFSSSICKLGQFDVNIGHHSYIRGRINCCEKELCEDQPFPGLPLSKPNG 115
Query: 511 H 513 + Sbjct: 116 Y 116
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PFK9 |
Definition |
tr|A9PFK9|A9PFK9_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
84 |
Score (bit) |
62.0 |
E-value |
3.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950719|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_G23, 5' (655 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PFK9|A9PFK9_POPTR Putative uncharacterized protein OS=Popul... 62 3e-08 tr|A5AWV8|A5AWV8_VITVI Putative uncharacterized protein OS=Vitis... 61 5e-08 tr|Q6ESE7|Q6ESE7_ORYSJ Os02g0532800 protein OS=Oryza sativa subs... 58 4e-07 tr|A2X5N8|A2X5N8_ORYSI Putative uncharacterized protein OS=Oryza... 58 4e-07 tr|B6SVC3|B6SVC3_MAIZE Putative uncharacterized protein OS=Zea m... 58 6e-07 tr|Q9M280|Q9M280_ARATH Putative uncharacterized protein T22K7_13... 57 1e-06 tr|A3A7L9|A3A7L9_ORYSJ Putative uncharacterized protein OS=Oryza... 57 1e-06 tr|A9RF35|A9RF35_PHYPA Predicted protein OS=Physcomitrella paten... 56 2e-06 tr|A7PPE2|A7PPE2_VITVI Chromosome chr8 scaffold_23, whole genome... 54 1e-05 tr|A5AR19|A5AR19_VITVI Putative uncharacterized protein OS=Vitis... 54 1e-05 tr|B6ST07|B6ST07_MAIZE Putative uncharacterized protein OS=Zea m... 53 2e-05 tr|B6SKB1|B6SKB1_MAIZE Putative uncharacterized protein OS=Zea m... 53 2e-05 tr|Q9LXJ1|Q9LXJ1_ARATH Putative uncharacterized protein F3C22_14... 52 2e-05 tr|Q7XVG6|Q7XVG6_ORYSJ Os04g0412100 protein OS=Oryza sativa subs... 52 2e-05 tr|Q01JB4|Q01JB4_ORYSA H0717B12.8 protein OS=Oryza sativa GN=H07... 52 2e-05 tr|A3ATM9|A3ATM9_ORYSJ Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|A2XT70|A2XT70_ORYSI Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|A7PKE5|A7PKE5_VITVI Chromosome chr15 scaffold_19, whole genom... 52 4e-05 tr|A5APW6|A5APW6_VITVI Putative uncharacterized protein OS=Vitis... 52 4e-05 tr|A9NN02|A9NN02_PICSI Putative uncharacterized protein OS=Picea... 51 5e-05 tr|A9SFV2|A9SFV2_PHYPA Predicted protein OS=Physcomitrella paten... 50 1e-04 tr|B3U2A7|B3U2A7_CUCSA Putative uncharacterized protein OS=Cucum... 47 0.001 tr|Q69P47|Q69P47_ORYSJ Putative uncharacterized protein OJ1740_D... 35 3.1 tr|Q1LNV7|Q1LNV7_RALME Hydrogenase maturation protein hypF OS=Ra... 35 4.0 tr|A4I2D3|A4I2D3_LEIIN Putative uncharacterized protein OS=Leish... 35 4.0 tr|Q6YX61|Q6YX61_ORYSJ Putative uncharacterized protein OSJNBa00... 35 5.3 tr|B3P584|B3P584_DROER GG11751 OS=Drosophila erecta GN=GG11751 P... 35 5.3 tr|Q6A9P8|Q6A9P8_PROAC Conserved protein OS=Propionibacterium ac... 34 9.0 tr|A8I4U7|A8I4U7_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 9.0 tr|Q7S3C0|Q7S3C0_NEUCR Predicted protein OS=Neurospora crassa GN... 34 9.0
>tr|A9PFK9|A9PFK9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 139
Score = 62.0 bits (149), Expect = 3e-08 Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Frame = +2
Query: 248 QPDGKSAAPPQVSDAGACGHERLC----GRARLQHHWVQVGGKVMIPDNWGLERHLQEWV 415 Q S +P D A GHE L GR RL+ H +V G+VMIPD WG E L++W+ Sbjct: 42 QASTSSVSPHHDGDCEA-GHEALLHKDSGRERLKKHREEVAGRVMIPDTWGQEDSLKDWI 100
Query: 416 SFGLLEDAYRPAGLMSARSALVAD 487 ++ P G+ SAR +LVA+ Sbjct: 101 DCSAFDELLAPNGISSARESLVAE 124
>tr|A5AWV8|A5AWV8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004804 PE=4 SV=1 Length = 920
Score = 61.2 bits (147), Expect = 5e-08 Identities = 27/54 (50%), Positives = 35/54 (64%) Frame = +2
Query: 323 RARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGLMSARSALVA 484 R RL+ HW +VGGKV+IPD WG E L+EW+ + + P G+ AR ALVA Sbjct: 719 RQRLRRHWSEVGGKVLIPDKWGKEDLLKEWIDYSSFDALLAPNGIGVAREALVA 772
>tr|Q6ESE7|Q6ESE7_ORYSJ Os02g0532800 protein OS=Oryza sativa subsp. japonica GN=P0605D08.30 PE=4 SV=1 Length = 195
Score = 58.2 bits (139), Expect = 4e-07 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 4/84 (4%) Frame = +2
Query: 251 PDGKSAAPPQVSDAGACGHERLCGRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLL 430 P + AP V A G ER R RL+ H ++ G+V IP+ WG ER L++WV + Sbjct: 96 PVSRRPAPSSV----AAGEERESARERLKRHRTEMAGRVRIPEMWGQERLLKDWVDCAVF 151
Query: 431 EDAYRP----AGLMSARSALVADC 490 + RP GL++AR ALVA+C Sbjct: 152 D---RPLAATRGLLTARDALVAEC 172
>tr|A2X5N8|A2X5N8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07521 PE=4 SV=1 Length = 195
Score = 58.2 bits (139), Expect = 4e-07 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 4/84 (4%) Frame = +2
Query: 251 PDGKSAAPPQVSDAGACGHERLCGRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLL 430 P + AP V A G ER R RL+ H ++ G+V IP+ WG ER L++WV + Sbjct: 96 PVSRRPAPSSV----AAGEERESARERLKRHRTEMAGRVRIPEMWGQERLLKDWVDCAVF 151
Query: 431 EDAYRP----AGLMSARSALVADC 490 + RP GL++AR ALVA+C Sbjct: 152 D---RPLAATRGLLTARDALVAEC 172
>tr|B6SVC3|B6SVC3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 173
Score = 57.8 bits (138), Expect = 6e-07 Identities = 25/71 (35%), Positives = 44/71 (61%) Frame = +2
Query: 278 QVSDAGACGHERLCGRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGL 457 QV++ A ++ R RL+ H ++ G+V +P+ WG E+ L++WV + + P GL Sbjct: 75 QVAEPKAAADDQESTRDRLKRHRREMAGRVWVPETWGQEKLLKDWVDCAVFDRPMVPMGL 134
Query: 458 MSARSALVADC 490 ++AR AL+A+C Sbjct: 135 LTARRALIAEC 145
>tr|Q9M280|Q9M280_ARATH Putative uncharacterized protein T22K7_130 (At3g44450) OS=Arabidopsis thaliana GN=T22K7_130 PE=4 SV=1 Length = 116
Score = 57.0 bits (136), Expect = 1e-06 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = +2
Query: 314 LCGRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGLMSARSALVAD 487 L GR RL+ H +V GKV IPD+WG E L W+ F + A+ + ++SAR+AL+AD Sbjct: 38 LSGRDRLKRHREEVAGKVPIPDSWGKEGLLMGWMDFSTFDAAFTSSQIVSARAALMAD 95
>tr|A3A7L9|A3A7L9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_006791 PE=4 SV=1 Length = 196
Score = 57.0 bits (136), Expect = 1e-06 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Frame = +2
Query: 296 ACGHERLCGRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRP----AGLMS 463 A G ER R RL+ H ++ G+V IP+ WG ER L++WV + + RP GL++ Sbjct: 108 AAGEERESARERLKRHRTEMAGRVRIPEMWGQERLLKDWVDCAVFD---RPLAATRGLLT 164
Query: 464 ARSALVADC 490 AR ALVA+C Sbjct: 165 ARDALVAEC 173
>tr|A9RF35|A9RF35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158738 PE=4 SV=1 Length = 430
Score = 56.2 bits (134), Expect = 2e-06 Identities = 29/55 (52%), Positives = 38/55 (69%) Frame = +2
Query: 323 RARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGLMSARSALVAD 487 R RL+ + V+IP+ WG E LQE+V+FG +EDA RP GLM AR+ALV+D Sbjct: 351 RERLRRFSNEQCRSVVIPNQWGGETKLQEFVAFGNIEDALRPLGLMMARAALVSD 405
>tr|A7PPE2|A7PPE2_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021619001 PE=4 SV=1 Length = 171
Score = 53.5 bits (127), Expect = 1e-05 Identities = 25/56 (44%), Positives = 37/56 (66%) Frame = +2
Query: 320 GRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGLMSARSALVAD 487 GR RL+ H V+V G V IPD WG E +++WV + + + + +MSAR+ALVA+ Sbjct: 97 GRERLKRHRVEVAGSVGIPDMWGQEELMKDWVDCSVFDASLVTSRIMSARAALVAE 152
>tr|A5AR19|A5AR19_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018276 PE=4 SV=1 Length = 196
Score = 53.5 bits (127), Expect = 1e-05 Identities = 25/56 (44%), Positives = 37/56 (66%) Frame = +2
Query: 320 GRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGLMSARSALVAD 487 GR RL+ H V+V G V IPD WG E +++WV + + + + +MSAR+ALVA+ Sbjct: 97 GRERLKRHRVEVAGSVGIPDMWGQEELMKDWVDCSVFDASLVTSRIMSARAALVAE 152
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