DK950719
Clone id TST38A01NGRL0009_G23
Library
Length 655
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_G23. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GGTGAGCAGAGCAGGCGAGGCGATGGTGAAATCCCGGCGCCTCTCTCCTGCTGCTGCGTC
TTCGTCCTCCCCCTTCTCCAGCTCAACTTCGCCATCGCCAGCGGCCTCCCTGTCGCTTAT
ATCCAACCCTCCCCTTCTCAAGCCTTCGACAGCCGCGTGCACGCCCTTCATTTCCTCCCT
CAAGCGCTGCCCTCTTCTGGATGTGAACTCAGACTTGTCGGCGCTCACTATTGCTGAAGG
CGGAGGCCAGCCAGACGGAAAAAGTGCAGCGCCACCCCAGGTTTCTGATGCAGGCGCATG
TGGGCATGAGAGGTTATGCGGCAGGGCAAGGCTTCAGCATCATTGGGTGCAGGTGGGAGG
CAAGGTTATGATTCCGGACAACTGGGGCTTGGAGAGGCATCTGCAGGAATGGGTGAGTTT
TGGACTGCTAGAGGACGCTTACAGACCTGCAGGGCTGATGTCCGCCAGGTCCGCCCTTGT
CGCAGACTGCCAACGTCGGTCCCGAGGGGGCATGTCCTCGTCTCAGCAGCCCGCTCCTCA
GCTTCTGACAGTGCCCTCTGCTGATCCGGTTCAATTAAGCAGCTGTGGCTGAGATAAGAG
TTTTTGCCCACTTTATGATGTGGTTGTCTCCCATTTTTGGGTTGTATATTGCAGC
■■Homology search results ■■ -
sp_hit_id Q9VA70
Definition sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogaster
Align length 55
Score (bit) 32.7
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950719|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_G23, 5'
(655 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogas... 33 1.7
sp|Q9SS90|RGLG1_ARATH E3 ubiquitin-protein ligase RGLG1 OS=Arabi... 32 2.2
sp|O75128|COBL_HUMAN Protein cordon-bleu OS=Homo sapiens GN=COBL... 32 2.2
sp|Q29C43|NCASE_DROPS Neutral ceramidase OS=Drosophila pseudoobs... 32 2.9
sp|Q9D4H4|AMOL1_MOUSE Angiomotin-like protein 1 OS=Mus musculus ... 32 2.9
sp|Q7T2U9|TFCP2_CHICK Transcription factor CP2 OS=Gallus gallus ... 32 3.8
sp|Q9ERA0|TFCP2_MOUSE Alpha-globin transcription factor CP2 OS=M... 31 6.5
sp|Q12800|TFCP2_HUMAN Alpha-globin transcription factor CP2 OS=H... 31 6.5
sp|Q39UG0|PDXJ_GEOMG Pyridoxine 5'-phosphate synthase OS=Geobact... 31 6.5
sp|Q90358|PA2I_CRODU Gamma-phospholipase A2 inhibitor CNF OS=Cro... 31 6.5
sp|Q7TPH6|MYCB2_MOUSE Probable E3 ubiquitin-protein ligase MYCBP... 30 8.5
sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP... 30 8.5

>sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogaster
GN=CDase PE=1 SV=1
Length = 704

Score = 32.7 bits (73), Expect = 1.7
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
Frame = -2

Query: 273 GAALFPSGWPPP----------SAIVSADKSEFTSRRGQRLREEMKGVHAAVEGL 139
G A FP W P I++A EFT+ G+RLR +++ +AV G+
Sbjct: 439 GRATFPYEWQPKIVSDQLLKIGDVIIAAVPCEFTTMAGRRLRNQIRAAASAVGGI 493


>sp|Q9SS90|RGLG1_ARATH E3 ubiquitin-protein ligase RGLG1
OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1
Length = 489

Score = 32.3 bits (72), Expect = 2.2
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -2

Query: 300 HAPASETWGGAALFPSGWPPPSAIVSADKSEFTSRRGQRLREEMKGVHAAVEGLRRGGLD 121
H + E + AA P+ PPPS AD+ +F RR ++ + + E L R GL+
Sbjct: 95 HQYSQEGYASAASQPNYPPPPSQSQVADRKKF-DRRYSKISDNYSSLLQVSEALGRAGLE 153

Query: 120 ISD 112
S+
Sbjct: 154 SSN 156


>sp|O75128|COBL_HUMAN Protein cordon-bleu OS=Homo sapiens GN=COBL PE=1
SV=2
Length = 1261

Score = 32.3 bits (72), Expect = 2.2
Identities = 21/65 (32%), Positives = 25/65 (38%)
Frame = +2

Query: 209 SDLSALTIAEGGGQPDGKSAAPPQVSDAGACGHERLCGRARLQHHWVQVGGKVMIPDNWG 388
S A + +E PDG PP SD AC E + G R H G P G
Sbjct: 1002 SSQEASSASEPRRAPDGTDPPPPHTSDTQACSRELVNGSVRAPGH----GEPSHPPGGSG 1057

Query: 389 LERHL 403
E H+
Sbjct: 1058 TESHI 1062


>sp|Q29C43|NCASE_DROPS Neutral ceramidase OS=Drosophila
pseudoobscura pseudoobscura GN=CDase PE=3 SV=1
Length = 704

Score = 32.0 bits (71), Expect = 2.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Frame = -2

Query: 273 GAALFPSGWPPP----------SAIVSADKSEFTSRRGQRLREEMKGVHAAVEGL 139
G A FP W P I++A EFT+ G+RLR +++ +A GL
Sbjct: 439 GRATFPYEWQPKIVSDQLLKIGDVIIAAVPCEFTTMAGRRLRNQIRAAASAAGGL 493


>sp|Q9D4H4|AMOL1_MOUSE Angiomotin-like protein 1 OS=Mus musculus
GN=Amotl1 PE=2 SV=1
Length = 882

Score = 32.0 bits (71), Expect = 2.9
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 17/114 (14%)
Frame = -1

Query: 574 LNRISRGHCQKLRSGLLR--------RGHAPSGPTLAVCDKGG-PGGHQP-CRSVSVL*Q 425
L + +GH + L +++ + H PS GG P QP C+++
Sbjct: 176 LKELKQGHVRSLSERIMQLSLERNGAKQHLPSSGNGKSFKAGGEPSPAQPVCKALDPRGP 235

Query: 424 SKTHPFLQMPLQAPVVRN--HNL-ASHLHP----MMLKPCPAA*PLMPTCACIR 284
+PF P+++PV +N H L + HP M+KP PA P A +R
Sbjct: 236 PPEYPFKTKPMKSPVSKNQDHGLYYNDQHPGVLHEMVKPYPAPQPARTEVAVLR 289


>sp|Q7T2U9|TFCP2_CHICK Transcription factor CP2 OS=Gallus gallus
GN=TFCP2 PE=2 SV=1
Length = 496

Score = 31.6 bits (70), Expect = 3.8
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2

Query: 158 CTPF--ISSLKRCPLLDVNSDLSALTIAEGGGQPDGKSAAPPQVSD 289
C+P+ I+ + P NS S+ +I EG G P+ + PP ++D
Sbjct: 277 CSPWPEITYVNNAPSPGFNSSHSSFSIGEGNGSPNHQPEPPPPIAD 322


>sp|Q9ERA0|TFCP2_MOUSE Alpha-globin transcription factor CP2 OS=Mus
musculus GN=Tcfcp2 PE=1 SV=1
Length = 502

Score = 30.8 bits (68), Expect = 6.5
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2

Query: 158 CTPF--ISSLKRCPLLDVNSDLSALTIAEGGGQPDGKSAAPPQVSD 289
C+P+ I+ + P NS S+ ++ EG G P+ + PP V+D
Sbjct: 277 CSPWPEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTD 322


>sp|Q12800|TFCP2_HUMAN Alpha-globin transcription factor CP2 OS=Homo
sapiens GN=TFCP2 PE=1 SV=2
Length = 502

Score = 30.8 bits (68), Expect = 6.5
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2

Query: 158 CTPF--ISSLKRCPLLDVNSDLSALTIAEGGGQPDGKSAAPPQVSD 289
C+P+ I+ + P NS S+ ++ EG G P+ + PP V+D
Sbjct: 277 CSPWPEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTD 322


>sp|Q39UG0|PDXJ_GEOMG Pyridoxine 5'-phosphate synthase OS=Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
GN=pdxJ PE=3 SV=1
Length = 239

Score = 30.8 bits (68), Expect = 6.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2

Query: 246 PPPSAIVSADKSEFTSRRGQRLREEMKGVHAAVEGLRRGGLDIS 115
P +V + E T+ G +R M+G+ AVE L+ GG+ +S
Sbjct: 86 PDMCTLVPEKRQELTTEGGLDVRIAMQGIAEAVERLQNGGIAVS 129


>sp|Q90358|PA2I_CRODU Gamma-phospholipase A2 inhibitor CNF
OS=Crotalus durissus terrificus PE=1 SV=1
Length = 200

Score = 30.8 bits (68), Expect = 6.5
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1

Query: 331 ASASLGAGGRQGYDSGQLGLGEASAGMGEFWTARGRLQTCRADVRQVRPCRRLPTSVPRG 510
AS S+ + + S LG+ +G RGR+ C ++ + +P LP S P G
Sbjct: 56 ASLSVRTVHKNCFSSSICKLGQFDVNIGHHSYIRGRINCCEKELCEDQPFPGLPLSKPNG 115

Query: 511 H 513
+
Sbjct: 116 Y 116


tr_hit_id A9PFK9
Definition tr|A9PFK9|A9PFK9_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 84
Score (bit) 62.0
E-value 3.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950719|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_G23, 5'
(655 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9PFK9|A9PFK9_POPTR Putative uncharacterized protein OS=Popul... 62 3e-08
tr|A5AWV8|A5AWV8_VITVI Putative uncharacterized protein OS=Vitis... 61 5e-08
tr|Q6ESE7|Q6ESE7_ORYSJ Os02g0532800 protein OS=Oryza sativa subs... 58 4e-07
tr|A2X5N8|A2X5N8_ORYSI Putative uncharacterized protein OS=Oryza... 58 4e-07
tr|B6SVC3|B6SVC3_MAIZE Putative uncharacterized protein OS=Zea m... 58 6e-07
tr|Q9M280|Q9M280_ARATH Putative uncharacterized protein T22K7_13... 57 1e-06
tr|A3A7L9|A3A7L9_ORYSJ Putative uncharacterized protein OS=Oryza... 57 1e-06
tr|A9RF35|A9RF35_PHYPA Predicted protein OS=Physcomitrella paten... 56 2e-06
tr|A7PPE2|A7PPE2_VITVI Chromosome chr8 scaffold_23, whole genome... 54 1e-05
tr|A5AR19|A5AR19_VITVI Putative uncharacterized protein OS=Vitis... 54 1e-05
tr|B6ST07|B6ST07_MAIZE Putative uncharacterized protein OS=Zea m... 53 2e-05
tr|B6SKB1|B6SKB1_MAIZE Putative uncharacterized protein OS=Zea m... 53 2e-05
tr|Q9LXJ1|Q9LXJ1_ARATH Putative uncharacterized protein F3C22_14... 52 2e-05
tr|Q7XVG6|Q7XVG6_ORYSJ Os04g0412100 protein OS=Oryza sativa subs... 52 2e-05
tr|Q01JB4|Q01JB4_ORYSA H0717B12.8 protein OS=Oryza sativa GN=H07... 52 2e-05
tr|A3ATM9|A3ATM9_ORYSJ Putative uncharacterized protein OS=Oryza... 52 2e-05
tr|A2XT70|A2XT70_ORYSI Putative uncharacterized protein OS=Oryza... 52 2e-05
tr|A7PKE5|A7PKE5_VITVI Chromosome chr15 scaffold_19, whole genom... 52 4e-05
tr|A5APW6|A5APW6_VITVI Putative uncharacterized protein OS=Vitis... 52 4e-05
tr|A9NN02|A9NN02_PICSI Putative uncharacterized protein OS=Picea... 51 5e-05
tr|A9SFV2|A9SFV2_PHYPA Predicted protein OS=Physcomitrella paten... 50 1e-04
tr|B3U2A7|B3U2A7_CUCSA Putative uncharacterized protein OS=Cucum... 47 0.001
tr|Q69P47|Q69P47_ORYSJ Putative uncharacterized protein OJ1740_D... 35 3.1
tr|Q1LNV7|Q1LNV7_RALME Hydrogenase maturation protein hypF OS=Ra... 35 4.0
tr|A4I2D3|A4I2D3_LEIIN Putative uncharacterized protein OS=Leish... 35 4.0
tr|Q6YX61|Q6YX61_ORYSJ Putative uncharacterized protein OSJNBa00... 35 5.3
tr|B3P584|B3P584_DROER GG11751 OS=Drosophila erecta GN=GG11751 P... 35 5.3
tr|Q6A9P8|Q6A9P8_PROAC Conserved protein OS=Propionibacterium ac... 34 9.0
tr|A8I4U7|A8I4U7_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 9.0
tr|Q7S3C0|Q7S3C0_NEUCR Predicted protein OS=Neurospora crassa GN... 34 9.0

>tr|A9PFK9|A9PFK9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 139

Score = 62.0 bits (149), Expect = 3e-08
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +2

Query: 248 QPDGKSAAPPQVSDAGACGHERLC----GRARLQHHWVQVGGKVMIPDNWGLERHLQEWV 415
Q S +P D A GHE L GR RL+ H +V G+VMIPD WG E L++W+
Sbjct: 42 QASTSSVSPHHDGDCEA-GHEALLHKDSGRERLKKHREEVAGRVMIPDTWGQEDSLKDWI 100

Query: 416 SFGLLEDAYRPAGLMSARSALVAD 487
++ P G+ SAR +LVA+
Sbjct: 101 DCSAFDELLAPNGISSARESLVAE 124


>tr|A5AWV8|A5AWV8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_004804 PE=4 SV=1
Length = 920

Score = 61.2 bits (147), Expect = 5e-08
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +2

Query: 323 RARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGLMSARSALVA 484
R RL+ HW +VGGKV+IPD WG E L+EW+ + + P G+ AR ALVA
Sbjct: 719 RQRLRRHWSEVGGKVLIPDKWGKEDLLKEWIDYSSFDALLAPNGIGVAREALVA 772


>tr|Q6ESE7|Q6ESE7_ORYSJ Os02g0532800 protein OS=Oryza sativa subsp.
japonica GN=P0605D08.30 PE=4 SV=1
Length = 195

Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +2

Query: 251 PDGKSAAPPQVSDAGACGHERLCGRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLL 430
P + AP V A G ER R RL+ H ++ G+V IP+ WG ER L++WV +
Sbjct: 96 PVSRRPAPSSV----AAGEERESARERLKRHRTEMAGRVRIPEMWGQERLLKDWVDCAVF 151

Query: 431 EDAYRP----AGLMSARSALVADC 490
+ RP GL++AR ALVA+C
Sbjct: 152 D---RPLAATRGLLTARDALVAEC 172


>tr|A2X5N8|A2X5N8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_07521 PE=4 SV=1
Length = 195

Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +2

Query: 251 PDGKSAAPPQVSDAGACGHERLCGRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLL 430
P + AP V A G ER R RL+ H ++ G+V IP+ WG ER L++WV +
Sbjct: 96 PVSRRPAPSSV----AAGEERESARERLKRHRTEMAGRVRIPEMWGQERLLKDWVDCAVF 151

Query: 431 EDAYRP----AGLMSARSALVADC 490
+ RP GL++AR ALVA+C
Sbjct: 152 D---RPLAATRGLLTARDALVAEC 172


>tr|B6SVC3|B6SVC3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 173

Score = 57.8 bits (138), Expect = 6e-07
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = +2

Query: 278 QVSDAGACGHERLCGRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGL 457
QV++ A ++ R RL+ H ++ G+V +P+ WG E+ L++WV + + P GL
Sbjct: 75 QVAEPKAAADDQESTRDRLKRHRREMAGRVWVPETWGQEKLLKDWVDCAVFDRPMVPMGL 134

Query: 458 MSARSALVADC 490
++AR AL+A+C
Sbjct: 135 LTARRALIAEC 145


>tr|Q9M280|Q9M280_ARATH Putative uncharacterized protein T22K7_130
(At3g44450) OS=Arabidopsis thaliana GN=T22K7_130 PE=4
SV=1
Length = 116

Score = 57.0 bits (136), Expect = 1e-06
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +2

Query: 314 LCGRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGLMSARSALVAD 487
L GR RL+ H +V GKV IPD+WG E L W+ F + A+ + ++SAR+AL+AD
Sbjct: 38 LSGRDRLKRHREEVAGKVPIPDSWGKEGLLMGWMDFSTFDAAFTSSQIVSARAALMAD 95


>tr|A3A7L9|A3A7L9_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_006791 PE=4 SV=1
Length = 196

Score = 57.0 bits (136), Expect = 1e-06
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Frame = +2

Query: 296 ACGHERLCGRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRP----AGLMS 463
A G ER R RL+ H ++ G+V IP+ WG ER L++WV + + RP GL++
Sbjct: 108 AAGEERESARERLKRHRTEMAGRVRIPEMWGQERLLKDWVDCAVFD---RPLAATRGLLT 164

Query: 464 ARSALVADC 490
AR ALVA+C
Sbjct: 165 ARDALVAEC 173


>tr|A9RF35|A9RF35_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_158738 PE=4 SV=1
Length = 430

Score = 56.2 bits (134), Expect = 2e-06
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +2

Query: 323 RARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGLMSARSALVAD 487
R RL+ + V+IP+ WG E LQE+V+FG +EDA RP GLM AR+ALV+D
Sbjct: 351 RERLRRFSNEQCRSVVIPNQWGGETKLQEFVAFGNIEDALRPLGLMMARAALVSD 405


>tr|A7PPE2|A7PPE2_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021619001
PE=4 SV=1
Length = 171

Score = 53.5 bits (127), Expect = 1e-05
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +2

Query: 320 GRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGLMSARSALVAD 487
GR RL+ H V+V G V IPD WG E +++WV + + + + +MSAR+ALVA+
Sbjct: 97 GRERLKRHRVEVAGSVGIPDMWGQEELMKDWVDCSVFDASLVTSRIMSARAALVAE 152


>tr|A5AR19|A5AR19_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_018276 PE=4 SV=1
Length = 196

Score = 53.5 bits (127), Expect = 1e-05
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +2

Query: 320 GRARLQHHWVQVGGKVMIPDNWGLERHLQEWVSFGLLEDAYRPAGLMSARSALVAD 487
GR RL+ H V+V G V IPD WG E +++WV + + + + +MSAR+ALVA+
Sbjct: 97 GRERLKRHRVEVAGSVGIPDMWGQEELMKDWVDCSVFDASLVTSRIMSARAALVAE 152