DK950739 |
Clone id |
TST38A01NGRL0009_H20 |
Library |
TST38 |
Length |
696 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_H20. 5' end sequence. |
Accession |
DK950739 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GTTTCTTCGGAAGAGAAGCAGAGGAGGCCTTTCCTTCTCAGTGCACAGAGCTCGAGCTTC TATGGAGCCCCTCGCACCTCCACTGAAGAAGTCGCGGCCAGACTTTCTATCAAACGGTGG CAACTTGCCATCTTCTTTTCCTCTACACGCTCCTGCAGGCGACAAGCGCTTTCCGTCTTC AGAGAGCTTTCTCTATGGTATGCCTTCCTCTCTCGTCATGTCCTTACCGTTTGAGTTGCC TTCAGCTATGTTGTTTGATCCTCTGACCGGGAACGGAGAGGTTTCTTTGTTGTCAACGGT GGAAGGGAAGTTTCTCCTGTAGACTGTCGCAATGGAGGATGAAAAGCTATCTTTTTTACG TTTAACCGAGCAAGGAAAGGTTCTGTGTATATCTTGTTTCGTTATTGGAGGAAGGATAGT TTCATGTACGGTTTATTGAAGGCTTCCCATGTTATTCCCCCTTAGGAGTTTCATTGGCTC AGAAGTGCAGGTTTCAGCTAGAGCTTCTTTATATTGCTGATGGTTCAAGCTGTTTTGTGT TAAACTTCTGTCTGCTTGGTGCCCGTCGAGGTTTGATAGTGACGAGGCCCTTTCTGGTGT AGATATTTTTTAAGGCCATGGAAAGGTATTGGTAGATGGAAAGTGGTCCCAAGCAACCTC CAGCCAGCCGCGTATTTGGGCGAGGTGTGTGTCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54GS1 |
Definition |
sp|Q54GS1|CL16A_DICDI Protein CLEC16A homolog OS=Dictyostelium discoideum |
Align length |
145 |
Score (bit) |
34.7 |
E-value |
0.51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950739|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_H20, 5' (696 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q54GS1|CL16A_DICDI Protein CLEC16A homolog OS=Dictyostelium d... 35 0.51 sp|Q5NQ27|IF2_ZYMMO Translation initiation factor IF-2 OS=Zymomo... 34 0.66 sp|Q7TS99|HELT_MOUSE Hairy and enhancer of split-related protein... 34 0.66 sp|Q8CIE2|ZMIZ2_MOUSE Zinc finger MIZ domain-containing protein ... 33 1.1 sp|Q24206|BRC4_DROME Broad-complex core protein isoform 6 OS=Dro... 33 1.9 sp|Q01295|BRC1_DROME Broad-complex core protein isoforms 1/2/3/4... 33 1.9 sp|P03936|YAC9_MAIZE Transposable element activator uncharacteri... 31 5.5 sp|Q97EZ2|LACG_CLOAB 6-phospho-beta-galactosidase OS=Clostridium... 31 5.5 sp|B0BZB1|LGT_ACAM1 Prolipoprotein diacylglyceryl transferase OS... 31 5.6 sp|P06916|FIRA_PLAFF 300 kDa antigen AG231 (Fragment) OS=Plasmod... 31 7.2 sp|P37889|FBLN2_MOUSE Fibulin-2 OS=Mus musculus GN=Fbln2 PE=1 SV=1 31 7.2 sp|Q54Y98|TRA2B_DICDI Transformer-2-beta homolog OS=Dictyosteliu... 30 9.5
>sp|Q54GS1|CL16A_DICDI Protein CLEC16A homolog OS=Dictyostelium discoideum GN=DDB_G0289943 PE=3 SV=1 Length = 1550
Score = 34.7 bits (78), Expect = 0.51 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 8/145 (5%) Frame = -1
Query: 615 P*KISTPERASS---LSNLDGHQADRSLTQNSLNHQQYKEALAETCT-----SEPMKLLR 460 P ++ TP S+ L+N+ G + S N+ N+ T T S P KL + Sbjct: 1274 PSRVITPIDTSNSHPLANILGSDDNISFVNNNNNNSNNNNTKKTTSTVNTPISTPHKLKK 1333
Query: 459 GNNMGSLQ*TVHETILPPITKQDIHRTFPCSVKRKKDSFSSSIATVYRRNFPSTVDNKET 280 GN S +++++ILP T +D R +V K D F++S F T+D KE Sbjct: 1334 GNRGSSSNSSLNDSILP--TLEDHLRK---TVSPKVDMFNTSF-------FDDTLDLKE- 1380
Query: 279 SPFPVRGSNNIAEGNSNGKDMTREE 205 + ++ + GN+N + E Sbjct: 1381 ----LISTDELNNGNNNNNNEDNNE 1401
>sp|Q5NQ27|IF2_ZYMMO Translation initiation factor IF-2 OS=Zymomonas mobilis GN=infB PE=3 SV=1 Length = 989
Score = 34.3 bits (77), Expect = 0.66 Identities = 22/75 (29%), Positives = 33/75 (44%) Frame = -2
Query: 326 QSTGETSLPPLTTKKPLRSRSEDQTT*LKATQTVRT*RERKAYHRESSLKTESACRLQER 147 +S G+ P + L SR E Q L+ + R +A RE LK E+ Q R Sbjct: 194 RSGGQPRQPRTLAHRDLASRQELQARLLREAEESRLQALEEARRREDRLKQEADLEEQRR 253
Query: 146 VEEKKMASCHRLIES 102 +EEK+ +E+ Sbjct: 254 IEEKRRLEAEAKVEA 268
>sp|Q7TS99|HELT_MOUSE Hairy and enhancer of split-related protein HELT OS=Mus musculus GN=Helt PE=1 SV=1 Length = 240
Score = 34.3 bits (77), Expect = 0.66 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 3/96 (3%) Frame = +2
Query: 29 LSFSVHRARASMEPLAPPLKKSRPDFLSNGGNLPSSFPLHAPAGDKRFPSSE---SFLYG 199 L+F +AR EP PPL PDF FP H+P FP SF + Sbjct: 118 LAFLQSKARLGAEPTFPPLSLPEPDFSYQLHAASPEFPGHSPGEATMFPQGATPGSFPWP 177
Query: 200 MPSSLVMSLPFELPSAMLFDPLTGNGEVSLLSTVEG 307 ++ +LP+ L SA + P L+ ++G Sbjct: 178 PGAARSPALPY-LSSATVPLPSPAQQHSPFLAPMQG 212
>sp|Q8CIE2|ZMIZ2_MOUSE Zinc finger MIZ domain-containing protein 2 OS=Mus musculus GN=Zmiz2 PE=2 SV=2 Length = 920
Score = 33.5 bits (75), Expect = 1.1 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = +2
Query: 56 ASMEPLAPPLKKSRPDFLSNGGNL--PSSFPLHAPAGDKRFPSSESFLYGMPSSLVMSLP 229 A PL PP + D+ S G N P +FP P+ P+ F G P +S Sbjct: 728 APFAPLQPPSAPTPSDYPSQGSNFMGPGTFPESFPSATPTTPNLAEFTQGPPP---ISYQ 784
Query: 230 FELPSAML 253 ++PS++L Sbjct: 785 SDIPSSLL 792
>sp|Q24206|BRC4_DROME Broad-complex core protein isoform 6 OS=Drosophila melanogaster GN=br PE=1 SV=2 Length = 880
Score = 32.7 bits (73), Expect = 1.9 Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 8/167 (4%) Frame = -1
Query: 585 SSLSNLDGHQADRSLTQNSLNHQQYKEALAETCTSEPMKLLRGN-NMGSLQ*TV------ 427 +++ +L H ++ L + ++ H+ A AE TS K LRG+ N L V Sbjct: 178 TAVPSLPSHINNQLLKRMAMMHRSSAAAAAEE-TSHAFKRLRGSDNSLPLSGAVGSGSNN 236
Query: 426 HETILPPITKQDIHRTFPCSVKRKKDSFSSSIATVYRRNFPSTVDNKETSPFPVRGSNNI 247 + LPP+ + S ++ FS+ I N P + K P G+ N Sbjct: 237 NSPDLPPLHARS------ASPQQTPADFST-IKHHNNNNTPPLKEEKRNGP---TGNGNS 286
Query: 246 AEGNSNGKDMTREEGIP*RKLSEDGKRLSPAGACR-GKEDGKLPPFD 109 GN NG + GI +S+ L+P+ R G +D K P D Sbjct: 287 GNGNGNGNGASNGNGI---SISDKLGSLTPSPLARAGADDVKSEPMD 330
>sp|Q01295|BRC1_DROME Broad-complex core protein isoforms 1/2/3/4/5 OS=Drosophila melanogaster GN=br PE=1 SV=2 Length = 727
Score = 32.7 bits (73), Expect = 1.9 Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 8/167 (4%) Frame = -1
Query: 585 SSLSNLDGHQADRSLTQNSLNHQQYKEALAETCTSEPMKLLRGN-NMGSLQ*TV------ 427 +++ +L H ++ L + ++ H+ A AE TS K LRG+ N L V Sbjct: 178 TAVPSLPSHINNQLLKRMAMMHRSSAAAAAEE-TSHAFKRLRGSDNSLPLSGAVGSGSNN 236
Query: 426 HETILPPITKQDIHRTFPCSVKRKKDSFSSSIATVYRRNFPSTVDNKETSPFPVRGSNNI 247 + LPP+ + S ++ FS+ I N P + K P G+ N Sbjct: 237 NSPDLPPLHARS------ASPQQTPADFST-IKHHNNNNTPPLKEEKRNGP---TGNGNS 286
Query: 246 AEGNSNGKDMTREEGIP*RKLSEDGKRLSPAGACR-GKEDGKLPPFD 109 GN NG + GI +S+ L+P+ R G +D K P D Sbjct: 287 GNGNGNGNGASNGNGI---SISDKLGSLTPSPLARAGADDVKSEPMD 330
>sp|P03936|YAC9_MAIZE Transposable element activator uncharacterized 23 kDa protein OS=Zea mays PE=4 SV=1 Length = 210
Score = 31.2 bits (69), Expect = 5.5 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +2
Query: 536 CVKLLSAWC-PSRFDSDEALSGVDIF*GHGKVLVDGKWSQATSSQPRI 676 CV LL WC P ++++ G+ G V++DG WS S P + Sbjct: 153 CVMLLLVWCLPPGREAEQRSLGISYM-GWASVVMDGSWSWPYCSHPEL 199
>sp|Q97EZ2|LACG_CLOAB 6-phospho-beta-galactosidase OS=Clostridium acetobutylicum GN=lacG PE=3 SV=1 Length = 474
Score = 31.2 bits (69), Expect = 5.5 Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 4/132 (3%) Frame = +2
Query: 17 SRGGLSFSVHRARASMEPLAPPLKK----SRPDFLSNGGNLPSSFPLHAPAGDKRFPSSE 184 +R + + V A+ E L +KK + ++ G + +FP P+ P + Sbjct: 130 NRNNIDYFVRFAKVCFEALGDRVKKWITFNEAWAVAQNGYIIGNFP---PSIKYDIPKAA 186
Query: 185 SFLYGMPSSLVMSLPFELPSAMLFDPLTGNGEVSLLSTVEGKFLL*TVAMEDEKLSFLRL 364 ++ M + + EL +M D GE+ ++ T+EGK+ + T + ED++ ++L Sbjct: 187 QSMHNM--MVAHAKVVELYKSMNLD-----GEIGIVHTLEGKYPI-TDSKEDKEAAYLDY 238
Query: 365 TEQGKVLCISCF 400 K + +CF Sbjct: 239 MISNKFMLDACF 250
>sp|B0BZB1|LGT_ACAM1 Prolipoprotein diacylglyceryl transferase OS=Acaryochloris marina (strain MBIC 11017) GN=lgt PE=3 SV=1 Length = 274
Score = 31.2 bits (69), Expect = 5.6 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 11/48 (22%) Frame = +1
Query: 346 AIFFTFNRARKGSVYILF-------RYW----RKDSFMYGLLKASHVI 456 A+FF F +A+KG++++++ R W R DS M G L+ + V+ Sbjct: 198 ALFFKFPKAKKGTIFLVYAVTYSLGRLWIEGLRTDSLMLGPLRIAQVV 245
>sp|P06916|FIRA_PLAFF 300 kDa antigen AG231 (Fragment) OS=Plasmodium falciparum (isolate FC27 / Papua New Guinea) GN=FIRA PE=2 SV=1 Length = 310
Score = 30.8 bits (68), Expect = 7.2 Identities = 20/59 (33%), Positives = 29/59 (49%) Frame = -2
Query: 311 TSLPPLTTKKPLRSRSEDQTT*LKATQTVRT*RERKAYHRESSLKTESACRLQERVEEK 135 T+ P+TT++P+ ++ T L ATQ T +E + S S RL E EEK Sbjct: 231 TAQEPITTQEPVTAQEPVTTQELIATQEPSTTQEHADEKKASEGDNISLSRLSEETEEK 289
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A1L1Q5 |
Definition |
tr|A1L1Q5|A1L1Q5_DANRE Zgc:158248 OS=Danio rerio |
Align length |
95 |
Score (bit) |
35.8 |
E-value |
2.7 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950739|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_H20, 5' (696 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A1L1Q5|A1L1Q5_DANRE Zgc:158248 OS=Danio rerio GN=zgc:158248 P... 36 2.7 tr|B6KSV8|B6KSV8_TOXGO Transcriptional co-activator ADA2-A OS=To... 35 3.5 tr|A4FGJ4|A4FGJ4_SACEN Putative 5-methyltetrahydrofolate:homocys... 35 3.5 tr|Q7Q4P5|Q7Q4P5_ANOGA AGAP008512-PA (Fragment) OS=Anopheles gam... 35 6.0 tr|Q6FNG2|Q6FNG2_CANGA Similarities with uniprot|P08640 Saccharo... 35 6.0 tr|Q9GRH4|Q9GRH4_SPHGR CDC2L5 protein kinase OS=Sphaerechinus gr... 35 6.0 tr|Q8BRJ9|Q8BRJ9_MOUSE Putative uncharacterized protein OS=Mus m... 34 7.8 tr|Q178F9|Q178F9_AEDAE Putative uncharacterized protein OS=Aedes... 34 7.8
>tr|A1L1Q5|A1L1Q5_DANRE Zgc:158248 OS=Danio rerio GN=zgc:158248 PE=2 SV=1 Length = 1153
Score = 35.8 bits (81), Expect = 2.7 Identities = 34/95 (35%), Positives = 40/95 (42%), Gaps = 5/95 (5%) Frame = +2
Query: 8 RKRSRGGLS----FSVHRARASMEPLAPPLKKSRPDFLSNGGNLPSSFPLHAPAGDKRFP 175 R+R GG S S RA A P P S+G NL S P P G Sbjct: 1035 RQRQVGGASQVAKSSTSRASAMTLPSPPVSSHLSQGSPSSGSNLLGSVPPSLPLG----- 1089
Query: 176 SSESFLYGMPSSLV-MSLPFELPSAMLFDPLTGNG 277 +GM LV +SLPF+ PS + F P TG G Sbjct: 1090 ------FGMLGGLVPVSLPFQFPSLLNFSP-TGPG 1117
>tr|B6KSV8|B6KSV8_TOXGO Transcriptional co-activator ADA2-A OS=Toxoplasma gondii ME49 GN=TGME49_017050 PE=4 SV=1 Length = 1203
Score = 35.4 bits (80), Expect = 3.5 Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 9/73 (12%) Frame = +2
Query: 56 ASMEPLAPPLKKSRPDFL-----SNGGN----LPSSFPLHAPAGDKRFPSSESFLYGMPS 208 AS +P PP + FL S+GGN +PSSF P+ PSS +PS Sbjct: 92 ASSKPTCPPENEKSSPFLGPPSDSSGGNATPSIPSSFSSSVPSS---LPSS------LPS 142
Query: 209 SLVMSLPFELPSA 247 SL SLP LPS+ Sbjct: 143 SLPSSLPPPLPSS 155
>tr|A4FGJ4|A4FGJ4_SACEN Putative 5-methyltetrahydrofolate:homocysteine S-methyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=metH PE=4 SV=1 Length = 1189
Score = 35.4 bits (80), Expect = 3.5 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%) Frame = -1
Query: 213 REEGI-P*RKLSE--DGKRLSPAGACRGKEDGKLPPFDRKSGRDFFSGGARGSIEARALC 43 R EG P +KL E +G+ + A R +E KLP F+R R G R +EA Sbjct: 607 RSEGYDPLQKLMELFEGQTAKSSSASRAEELAKLPLFERLEKR--IVDGERNGLEADLEA 664
Query: 42 TEKERPPLLLFRRN 1 +E+PPL + +N Sbjct: 665 AMQEKPPLEIINQN 678
>tr|Q7Q4P5|Q7Q4P5_ANOGA AGAP008512-PA (Fragment) OS=Anopheles gambiae GN=AGAP008512 PE=4 SV=4 Length = 2838
Score = 34.7 bits (78), Expect = 6.0 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = -2
Query: 368 RLNVKKIAFHPPLRQSTGETSLPPLTTKKPLRSRSEDQTT*LKATQTVRT*RERKAY 198 R++ K FHP S+ +SLPP +T P+ + + TT + T T T R Y Sbjct: 2290 RMHDGKGYFHPSSSPSSSSSSLPPPSTSSPVTPTTTNATTTITTTTTTTTVRPPTTY 2346
>tr|Q6FNG2|Q6FNG2_CANGA Similarities with uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 OS=Candida glabrata GN=CAGL0J11968g PE=4 SV=1 Length = 958
Score = 34.7 bits (78), Expect = 6.0 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Frame = +2
Query: 56 ASMEPLAPPLKKSRPDFLSN-GGNLPSSFPLHAPAG-DKRFPSS--ESFLYGMPSSLVMS 223 +S P + P +P +SN ++PSS P P+ PSS S MPSS+ S Sbjct: 390 SSSMPSSMPSSVIKPSTVSNHSSSMPSSIPSSMPSSMPSSMPSSIPSSMPSSMPSSIPSS 449
Query: 224 LPFELPSAM 250 +P +PS+M Sbjct: 450 IPSSIPSSM 458
Score = 34.3 bits (77), Expect = 7.8 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = +2
Query: 119 GNLPSSFPLHAPAGDKRFPSS--ESFLYGMPSSLVMSLPFELPSAMLFDPLTGNGEVSLL 292 G++PSS P P+ PSS S +PSS+ S+P +PS+++ N S+ Sbjct: 464 GSMPSSIPSSMPSS---IPSSMPSSIPSSIPSSMPSSMPSSMPSSVIKPSTVSNHSSSMP 520
Query: 293 STVEG 307 S++ G Sbjct: 521 SSIPG 525
>tr|Q9GRH4|Q9GRH4_SPHGR CDC2L5 protein kinase OS=Sphaerechinus granularis GN=CDC2L5 PE=2 SV=1 Length = 1266
Score = 34.7 bits (78), Expect = 6.0 Identities = 18/40 (45%), Positives = 21/40 (52%) Frame = -1
Query: 183 SEDGKRLSPAGACRGKEDGKLPPFDRKSGRDFFSGGARGS 64 S D L PAG +GK LP F+R GR F G RG+ Sbjct: 1215 SGDRGNLFPAGKSKGKNWAPLPSFNRGGGRGGFKGSHRGN 1254
>tr|Q8BRJ9|Q8BRJ9_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Helt PE=2 SV=1 Length = 202
Score = 34.3 bits (77), Expect = 7.8 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 3/96 (3%) Frame = +2
Query: 29 LSFSVHRARASMEPLAPPLKKSRPDFLSNGGNLPSSFPLHAPAGDKRFPSSE---SFLYG 199 L+F +AR EP PPL PDF FP H+P FP SF + Sbjct: 80 LAFLQSKARLGAEPTFPPLSLPEPDFSYQLHAASPEFPGHSPGEATMFPQGATPGSFPWP 139
Query: 200 MPSSLVMSLPFELPSAMLFDPLTGNGEVSLLSTVEG 307 ++ +LP+ L SA + P L+ ++G Sbjct: 140 PGAARSPALPY-LSSATVPLPSPAQQHSPFLAPMQG 174
>tr|Q178F9|Q178F9_AEDAE Putative uncharacterized protein OS=Aedes aegypti GN=AAEL005916 PE=4 SV=1 Length = 561
Score = 34.3 bits (77), Expect = 7.8 Identities = 27/99 (27%), Positives = 44/99 (44%) Frame = -2
Query: 383 EPFLARLNVKKIAFHPPLRQSTGETSLPPLTTKKPLRSRSEDQTT*LKATQTVRT*RERK 204 E FLA+ + + P Q + S PP+T K + +E QTT T ++ +E Sbjct: 203 EVFLAQTSFSPFTYIPYYTQQSAPNSKPPVTIKTDDDNVTE-QTTIPIFTLATQSDQESP 261
Query: 203 AYHRESSLKTESACRLQERVEEKKMASCHRLIESLAATS 87 A E+S+ T + C + +E +C I S+ S Sbjct: 262 ADTIEASVTTGTCCESPDTIEPAPGLTCAEYISSVQLAS 300
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