DK950744 |
Clone id |
TST38A01NGRL0009_I01 |
Library |
TST38 |
Length |
662 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_I01. 5' end sequence. |
Accession |
DK950744 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
CCGCCGGCATAATACATTCCCTTCACACGCAACATACCCATCACGCAGCCTCCCACTCCG CAGCTTTGCATCTCCTTCGTTTTGGGCGAAACACGCACATGGCCACTCATGTTCTTGCTC ACACAACTCCTGCAGCAGCAAGCGGAAATGAGTGCGCAAGCGTCTCGAGAAGGCGGGCTT GCCACCCTCATGTCTCCTGTGGATTAAAATCTCAGTTTCTTGGTCTGCGCTTGAGCCTCC GTAGCCACGATGATGACAGACTGCTGATATCACCTATTTGTCGACGTCCCCTTGTTGTGG CCAGATTATTTGGGCCTGCTATCTTTGAGGCTTCCAAGCTCAAGGTCGTTTTCCTGGGGG ATGGCTTTTTTAACCCCCCCCCCCAGCTTCCTCGTGCCTACACCCTAAAAAAGAGGGAGG TCACAGCCAAGCTTACGTTGGCCGTTTCTCAAACAATCAACAAGGCTCAGATCCNAGGTT GGTACAATCGGCTGCAAAGAGATGAGGTCTTAGCAGAGTGGAAAAAATCCCAAGGTTCCA TGTCTTTGCATGTCCACTGTCATATAAGTGGAGGTCATTTTCTCTTAGATACAATCGCAN AGTTACGATTTTACATATTTCGTAGAGAACTTCCCGTGGTGCTGGCAGCCTTTAGGTACG GA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A1W1K3 |
Definition |
sp|A1W1K3|HIS4_CAMJJ 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) |
Align length |
58 |
Score (bit) |
32.0 |
E-value |
3.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNY3 |
Definition |
tr|A9NNY3|A9NNY3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
123 |
Score (bit) |
191.0 |
E-value |
5.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950744|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_I01, 5' (662 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NNY3|A9NNY3_PICSI Putative uncharacterized protein OS=Picea... 191 5e-47 tr|Q652K1|Q652K1_ORYSJ Os09g0532000 protein OS=Oryza sativa subs... 181 3e-44 tr|A3C0X0|A3C0X0_ORYSJ Putative uncharacterized protein OS=Oryza... 181 3e-44 tr|A2Z3E5|A2Z3E5_ORYSI Putative uncharacterized protein OS=Oryza... 181 3e-44 tr|A9YF60|A9YF60_CAPAN Stay green protein (Chlorophyll retainer)... 180 8e-44 tr|Q5EMQ1|Q5EMQ1_HORVU Senescence-inducible chloroplast stay-gre... 179 1e-43 tr|A9YTW1|A9YTW1_TOBAC Putative staygreen protein OS=Nicotiana t... 179 2e-43 tr|A7VLV2|A7VLV2_PEA Senescence-inducible chloroplast stay-green... 178 3e-43 tr|A7VLV1|A7VLV1_PEA Senescence-inducible chloroplast stay-green... 178 3e-43 tr|Q5EMQ0|Q5EMQ0_MAIZE Senescence-inducible chloroplast stay-gre... 177 4e-43 tr|Q5EMP8|Q5EMP8_SORBI Senescence-inducible chloroplast stay-gre... 177 4e-43 tr|Q4JFW8|Q4JFW8_SOLLC Senescence-inducible chloroplast stay-gre... 177 4e-43 tr|Q5EMP6|Q5EMP6_SOYBN Senescence-inducible chloroplast stay-gre... 177 7e-43 tr|Q5EMP9|Q5EMP9_MAIZE Senescence-inducible chloroplast stay-gre... 175 2e-42 tr|B6SRJ2|B6SRJ2_MAIZE Senescence-inducible chloroplast stay-gre... 175 2e-42 tr|Q5EMP7|Q5EMP7_SOYBN Senescence-inducible chloroplast stay-gre... 175 3e-42 tr|B6TQ21|B6TQ21_MAIZE Senescence-inducible chloroplast stay-gre... 174 4e-42 tr|B4FTC3|B4FTC3_MAIZE Putative uncharacterized protein OS=Zea m... 173 7e-42 tr|A7QKD1|A7QKD1_VITVI Chromosome chr2 scaffold_112, whole genom... 173 1e-41 tr|A5BDD7|A5BDD7_VITVI Putative uncharacterized protein OS=Vitis... 172 1e-41 tr|Q9T059|Q9T059_ARATH Putative uncharacterized protein AT4g1191... 170 6e-41 tr|Q66WT5|Q66WT5_ARATH STAY-GREEN2 protein (Non-yellowing protei... 170 6e-41 tr|O82741|O82741_ARATH Putative uncharacterized protein F7H19.10... 170 8e-41 tr|A9SDP2|A9SDP2_PHYPA Predicted protein (Fragment) OS=Physcomit... 170 8e-41 tr|Q8LBZ2|Q8LBZ2_ARATH Putative uncharacterized protein OS=Arabi... 167 4e-40 tr|A9T2Y8|A9T2Y8_PHYPA Predicted protein OS=Physcomitrella paten... 166 1e-39 tr|B3H593|B3H593_ARATH Uncharacterized protein At4g11911.1 OS=Ar... 161 4e-38 tr|Q5EMP5|Q5EMP5_9POAL Senescence-inducible chloroplast stay-gre... 139 1e-31 tr|A7QKD0|A7QKD0_VITVI Chromosome chr2 scaffold_112, whole genom... 114 5e-24 tr|A5BU42|A5BU42_VITVI Putative uncharacterized protein OS=Vitis... 111 3e-23
>tr|A9NNY3|A9NNY3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 293
Score = 191 bits (484), Expect = 5e-47 Identities = 92/123 (74%), Positives = 104/123 (84%) Frame = +3
Query: 294 VVARLFGPAIFEASKLKVVFLGDGFFNPPPQLPRAYTLKKREVTAKLTLAVSQTINKAQI 473 VVARLFGPAIF+ASKL V+FLG P LPR YTL ++TAK+TLA+SQTINK Q+ Sbjct: 81 VVARLFGPAIFQASKLNVLFLGTHEEKHPGHLPRTYTLTHSDITAKITLAISQTINKDQL 140
Query: 474 XGWYNRLQRDEVLAEWKKSQGSMSLHVHCHISGGHFLLDTIAXLRFYIFRRELPVVLAAF 653 GWYNRLQRDEV+A+WKKSQG MSLHVHCHISGGH+LLD IA LRFYIFR+ELPVVL AF Sbjct: 141 QGWYNRLQRDEVIAQWKKSQGKMSLHVHCHISGGHWLLDAIARLRFYIFRKELPVVLEAF 200
Query: 654 RYG 662 R+G Sbjct: 201 RHG 203
>tr|Q652K1|Q652K1_ORYSJ Os09g0532000 protein OS=Oryza sativa subsp. japonica GN=OJ1254_E07.23 PE=2 SV=1 Length = 274
Score = 181 bits (460), Expect = 3e-44 Identities = 92/130 (70%), Positives = 105/130 (80%), Gaps = 2/130 (1%) Frame = +3
Query: 279 CRRPLVVARLFGPAIFEASKLKVVFLG--DGFFNPPPQLPRAYTLKKREVTAKLTLAVSQ 452 CR + ARLFGPAIFEASKLKV+FLG + P +LPR YTL +VTA+LTLAVS Sbjct: 42 CRYVVPRARLFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSH 101
Query: 453 TINKAQIXGWYNRLQRDEVLAEWKKSQGSMSLHVHCHISGGHFLLDTIAXLRFYIFRREL 632 TIN+AQ+ GWYN+LQRDEV+AEWKK QG MSLHVHCHISGGH LLD IA LR+YIFR+EL Sbjct: 102 TINRAQLQGWYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKEL 161
Query: 633 PVVLAAFRYG 662 PVVL AF +G Sbjct: 162 PVVLKAFVHG 171
>tr|A3C0X0|A3C0X0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028942 PE=4 SV=1 Length = 284
Score = 181 bits (460), Expect = 3e-44 Identities = 92/130 (70%), Positives = 105/130 (80%), Gaps = 2/130 (1%) Frame = +3
Query: 279 CRRPLVVARLFGPAIFEASKLKVVFLG--DGFFNPPPQLPRAYTLKKREVTAKLTLAVSQ 452 CR + ARLFGPAIFEASKLKV+FLG + P +LPR YTL +VTA+LTLAVS Sbjct: 42 CRYVVPRARLFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSH 101
Query: 453 TINKAQIXGWYNRLQRDEVLAEWKKSQGSMSLHVHCHISGGHFLLDTIAXLRFYIFRREL 632 TIN+AQ+ GWYN+LQRDEV+AEWKK QG MSLHVHCHISGGH LLD IA LR+YIFR+EL Sbjct: 102 TINRAQLQGWYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKEL 161
Query: 633 PVVLAAFRYG 662 PVVL AF +G Sbjct: 162 PVVLKAFVHG 171
>tr|A2Z3E5|A2Z3E5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32148 PE=4 SV=1 Length = 274
Score = 181 bits (460), Expect = 3e-44 Identities = 92/130 (70%), Positives = 105/130 (80%), Gaps = 2/130 (1%) Frame = +3
Query: 279 CRRPLVVARLFGPAIFEASKLKVVFLG--DGFFNPPPQLPRAYTLKKREVTAKLTLAVSQ 452 CR + ARLFGPAIFEASKLKV+FLG + P +LPR YTL +VTA+LTLAVS Sbjct: 42 CRYVVPRARLFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSH 101
Query: 453 TINKAQIXGWYNRLQRDEVLAEWKKSQGSMSLHVHCHISGGHFLLDTIAXLRFYIFRREL 632 TIN+AQ+ GWYN+LQRDEV+AEWKK QG MSLHVHCHISGGH LLD IA LR+YIFR+EL Sbjct: 102 TINRAQLQGWYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKEL 161
Query: 633 PVVLAAFRYG 662 PVVL AF +G Sbjct: 162 PVVLKAFVHG 171
>tr|A9YF60|A9YF60_CAPAN Stay green protein (Chlorophyll retainer) OS=Capsicum annuum GN=SGR PE=2 SV=1 Length = 266
Score = 180 bits (456), Expect = 8e-44 Identities = 87/122 (71%), Positives = 101/122 (82%) Frame = +3
Query: 297 VARLFGPAIFEASKLKVVFLGDGFFNPPPQLPRAYTLKKREVTAKLTLAVSQTINKAQIX 476 VARLFGPAIFEASKLKV+FLG P +LPR YTL ++T+KLTLA+SQTIN +Q+ Sbjct: 40 VARLFGPAIFEASKLKVLFLGVDEKKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQ 99
Query: 477 GWYNRLQRDEVLAEWKKSQGSMSLHVHCHISGGHFLLDTIAXLRFYIFRRELPVVLAAFR 656 GWYNRLQRDEV+AEWKK +G MSLHVHCHISGGHF+LD A LR+YIF +ELPVVL AF Sbjct: 100 GWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFMLDLFARLRYYIFCKELPVVLKAFV 159
Query: 657 YG 662 +G Sbjct: 160 HG 161
>tr|Q5EMQ1|Q5EMQ1_HORVU Senescence-inducible chloroplast stay-green protein OS=Hordeum vulgare GN=SGR PE=2 SV=1 Length = 281
Score = 179 bits (454), Expect = 1e-43 Identities = 89/121 (73%), Positives = 101/121 (83%) Frame = +3
Query: 300 ARLFGPAIFEASKLKVVFLGDGFFNPPPQLPRAYTLKKREVTAKLTLAVSQTINKAQIXG 479 ARLFGPAIFEASKLKV+F+G P +LPR YTL +VTA+LTLAVS TI+ AQ+ G Sbjct: 48 ARLFGPAIFEASKLKVLFVGVDEEKHPGKLPRTYTLTHSDVTARLTLAVSHTIHAAQLQG 107
Query: 480 WYNRLQRDEVLAEWKKSQGSMSLHVHCHISGGHFLLDTIAXLRFYIFRRELPVVLAAFRY 659 WYNRLQRDEV+AEWKK QG+MSLHVHCHISGGHFLLD IA LR+YIFR+EL VVL AF + Sbjct: 108 WYNRLQRDEVVAEWKKVQGAMSLHVHCHISGGHFLLDLIAPLRYYIFRKELSVVLKAFVH 167
Query: 660 G 662 G Sbjct: 168 G 168
>tr|A9YTW1|A9YTW1_TOBAC Putative staygreen protein OS=Nicotiana tabacum PE=2 SV=1 Length = 267
Score = 179 bits (453), Expect = 2e-43 Identities = 88/122 (72%), Positives = 100/122 (81%) Frame = +3
Query: 297 VARLFGPAIFEASKLKVVFLGDGFFNPPPQLPRAYTLKKREVTAKLTLAVSQTINKAQIX 476 VARLFGPAIFEASKLKV+FLG P + PR YTL +VT+KLTLA+SQTIN +Q+ Sbjct: 40 VARLFGPAIFEASKLKVLFLGVDEKKHPGKRPRTYTLTHSDVTSKLTLAISQTINNSQLQ 99
Query: 477 GWYNRLQRDEVLAEWKKSQGSMSLHVHCHISGGHFLLDTIAXLRFYIFRRELPVVLAAFR 656 GWYNRLQRDEV+AEWKK +G MSLHVHCHISGGHFLLD A LR+YIF +ELPVVL AF Sbjct: 100 GWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDLFARLRYYIFCKELPVVLKAFV 159
Query: 657 YG 662 +G Sbjct: 160 HG 161
>tr|A7VLV2|A7VLV2_PEA Senescence-inducible chloroplast stay-green protein OS=Pisum sativum GN=SGR PE=2 SV=1 Length = 263
Score = 178 bits (451), Expect = 3e-43 Identities = 87/122 (71%), Positives = 100/122 (81%) Frame = +3
Query: 297 VARLFGPAIFEASKLKVVFLGDGFFNPPPQLPRAYTLKKREVTAKLTLAVSQTINKAQIX 476 VARLFGPAIFEASKLKV+FLG P LPR YTL +VT+KLTLA+SQTIN +Q+ Sbjct: 44 VARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLQ 103
Query: 477 GWYNRLQRDEVLAEWKKSQGSMSLHVHCHISGGHFLLDTIAXLRFYIFRRELPVVLAAFR 656 GWYNRLQRDEV+A+WKK +G MSLHVHCHISGGHFLLD A LR++IF +ELPVVL AF Sbjct: 104 GWYNRLQRDEVVAQWKKVKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELPVVLKAFV 163
Query: 657 YG 662 +G Sbjct: 164 HG 165
>tr|A7VLV1|A7VLV1_PEA Senescence-inducible chloroplast stay-green protein OS=Pisum sativum GN=SGR PE=2 SV=1 Length = 261
Score = 178 bits (451), Expect = 3e-43 Identities = 87/122 (71%), Positives = 100/122 (81%) Frame = +3
Query: 297 VARLFGPAIFEASKLKVVFLGDGFFNPPPQLPRAYTLKKREVTAKLTLAVSQTINKAQIX 476 VARLFGPAIFEASKLKV+FLG P LPR YTL +VT+KLTLA+SQTIN +Q+ Sbjct: 44 VARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLQ 103
Query: 477 GWYNRLQRDEVLAEWKKSQGSMSLHVHCHISGGHFLLDTIAXLRFYIFRRELPVVLAAFR 656 GWYNRLQRDEV+A+WKK +G MSLHVHCHISGGHFLLD A LR++IF +ELPVVL AF Sbjct: 104 GWYNRLQRDEVVAQWKKVKGKMSLHVHCHISGGHFLLDIFARLRYFIFCKELPVVLKAFV 163
Query: 657 YG 662 +G Sbjct: 164 HG 165
>tr|Q5EMQ0|Q5EMQ0_MAIZE Senescence-inducible chloroplast stay-green protein 1 OS=Zea mays GN=SGR1 PE=2 SV=1 Length = 281
Score = 177 bits (450), Expect = 4e-43 Identities = 96/139 (69%), Positives = 106/139 (76%), Gaps = 12/139 (8%) Frame = +3
Query: 282 RRPLVV--ARLFGPAIFEASKLKVVFLG--DGFFN--------PPPQLPRAYTLKKREVT 425 RR VV ARLFGPAIFEASKLKV+FLG +G P P LPR YTL +VT Sbjct: 39 RRRYVVPTARLFGPAIFEASKLKVLFLGVDEGSSKHLHAHHPAPAPLLPRTYTLTHSDVT 98
Query: 426 AKLTLAVSQTINKAQIXGWYNRLQRDEVLAEWKKSQGSMSLHVHCHISGGHFLLDTIAXL 605 A LTLAVS TIN+AQ+ GWYNRLQRDEV+AEWKK +G MSLHVHCHISGGH LLD IA L Sbjct: 99 ASLTLAVSHTINRAQLQGWYNRLQRDEVVAEWKKVRGRMSLHVHCHISGGHLLLDLIAGL 158
Query: 606 RFYIFRRELPVVLAAFRYG 662 R+YIFR+ELPVVL AF +G Sbjct: 159 RYYIFRKELPVVLEAFVHG 177
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