DK950745
Clone id TST38A01NGRL0009_I02
Library
Length 668
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_I02. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
GTTGAATCGTCCGCCATGTCCTCAAAACCAACGGCGGCAGCCATGGCGGAGAGTTTGCGC
AGTAGAACATGGCGCTGCCTCAGGTCCTCTCATCACTTGCGCACCTCTCAAAAATTGGCT
TTGCTTCGCCGTTTCCTTCACTCCTTTTCTCGCCTGGGTGACGTTGAGAGCCAGCTGGTT
CTTCGATACGAGATCCTTTGTCTGCGGGAGTCGTGTGGCTCTACAGAAATGAAAGTGGAC
ACCAGTGAATGGTCATCTTTTGCGGAGGATTGTTTATCAGCAGGATTTCCAGGCAATGCA
AGCAAGGCCTTTGAAAAGGCAATATCTCAAACGGAAGGTTATCAAACCACAAATGTAGAT
CCACAGTATGAAGTGCAGAGTTGCTTAAAGCATGTTCAGCACATTATGATGCCCGAAATC
AATGGTCGATTTGACAAGGGCAGTTCCAATGGCAGCTTTTCGGACTCGCTTCGTGAGAAG
TCATCAACAGCTGTATCTAGATACTCAGAGGGATTGAAGAGAAAGGAGCGAGCAAAACTG
CAGATGCTGCATGAAAAAAACGATTTTTGCATCGACTAANTGTTCAGGTCAGTTTCTAAG
AGCTTCAAGCATGCTCTGCACCATCAGTTTGAATGGTTTGGTTCTCAACTTCAGCACAGC
CAGAATGG
■■Homology search results ■■ -
sp_hit_id Q5SYL3
Definition sp|Q5SYL3|K0100_MOUSE UPF0378 protein KIAA0100 OS=Mus musculus
Align length 77
Score (bit) 33.9
E-value 0.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950745|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_I02, 5'
(668 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5SYL3|K0100_MOUSE UPF0378 protein KIAA0100 OS=Mus musculus G... 34 0.80
sp|Q4L6D0|CTPAL_STAHJ Probable ctpA-like serine protease OS=Stap... 30 2.0
sp|Q6CNY5|MED5_KLULA Mediator of RNA polymerase II transcription... 31 5.2
sp|Q96Q06|K1881_HUMAN Protein KIAA1881 OS=Homo sapiens GN=KIAA18... 31 6.8

>sp|Q5SYL3|K0100_MOUSE UPF0378 protein KIAA0100 OS=Mus musculus
GN=Kiaa0100 PE=2 SV=1
Length = 2234

Score = 33.9 bits (76), Expect = 0.80
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 7/77 (9%)
Frame = +1

Query: 250 WSSFAEDCLSAGFPGNASKAFEKAISQTEGYQTTNVDPQYEVQSCLKHVQ-------HIM 408
W++ D + G A K TE + +DPQ + + + H+
Sbjct: 1458 WTTTNRDIAFGLYDGYKKAAVLKRNLSTEALKGLKIDPQMSAKKPKRGIPPSAQVPPHVS 1517

Query: 409 MPEINGRFDKGSSNGSF 459
P +GR DKGSS G++
Sbjct: 1518 TPSFSGRPDKGSSGGAY 1534


>sp|Q4L6D0|CTPAL_STAHJ Probable ctpA-like serine protease
OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=SH1486 PE=3 SV=2
Length = 496

Score = 29.6 bits (65), Expect(2) = 2.0
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1

Query: 337 GYQTTNVDPQYEVQ--SCLKHVQHIMMPEINGRFDKGSSNGSFSDSLREKSS 486
GY N Q++ Q S +K Q +NG+FDK +N F+ L EK++
Sbjct: 432 GYNVNNDSKQFDTQLESAIKKFQSEHELSVNGKFDK-KTNEKFTQLLVEKAN 482



Score = 21.6 bits (44), Expect(2) = 2.0
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Frame = +2

Query: 188 TRSFVCGSRVALQK*KWTPVNGHLLRRIVYQQD-------FQAMQARPLKRQY 325
TR F GS + + KW +GH + Q D +Q++ P + Y
Sbjct: 360 TREFKDGSLLKYTQMKWLTPDGHNIHGKGIQPDTKIASPQYQSISVIPTDKSY 412


>sp|Q6CNY5|MED5_KLULA Mediator of RNA polymerase II transcription
subunit 5 OS=Kluyveromyces lactis GN=NUT1 PE=3 SV=1
Length = 1067

Score = 31.2 bits (69), Expect = 5.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1

Query: 403 IMMPEINGRFDKGSSNGSFSDSLREKSSTAVSRYSEGLK 519
+++ E+ R+D +NG S++ E ++T + +Y E LK
Sbjct: 1025 VVIAEMKKRYDTSKNNGLLSEAAYENATTFIRKYVENLK 1063


>sp|Q96Q06|K1881_HUMAN Protein KIAA1881 OS=Homo sapiens GN=KIAA1881
PE=2 SV=2
Length = 1357

Score = 30.8 bits (68), Expect = 6.8
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1

Query: 289 PGNASKAFEKAISQTEGYQTTNVDPQYEVQSCLKHVQHIMM-PEINGRFDKGSSNGSFSD 465
P +AFE A+S + Q D ++Q C + ++ PE R D+GS +
Sbjct: 1186 PSFRQRAFEHAVSHLQHGQFQARDTLAQLQDCFRLIEKAQQAPEGQPRLDQGSGASAEDA 1245

Query: 466 SLREKSSTAVSRYSEGLKRK 525
+++E+ V GL R+
Sbjct: 1246 AVQEERDAGVLSRVCGLLRQ 1265


tr_hit_id Q2QYU4
Definition tr|Q2QYU4|Q2QYU4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica
Align length 58
Score (bit) 49.3
E-value 0.0002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950745|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_I02, 5'
(668 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2QYU4|Q2QYU4_ORYSJ Putative uncharacterized protein OS=Oryza... 49 2e-04
tr|Q0IQQ9|Q0IQQ9_ORYSJ Os12g0106100 protein OS=Oryza sativa subs... 49 2e-04
tr|B8BNT9|B8BNT9_ORYSI Putative uncharacterized protein OS=Oryza... 49 2e-04
tr|Q0IV79|Q0IV79_ORYSJ Os11g0106800 protein OS=Oryza sativa subs... 48 6e-04
tr|B8BIN1|B8BIN1_ORYSI Putative uncharacterized protein OS=Oryza... 48 6e-04
tr|Q9LMJ9|Q9LMJ9_ARATH F10K1.23 OS=Arabidopsis thaliana GN=F10K1... 45 0.005
tr|Q8RX33|Q8RX33_ARATH Putative uncharacterized protein At1g0706... 45 0.005
tr|Q2RBM1|Q2RBM1_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 42 0.045
tr|A7NY92|A7NY92_VITVI Chromosome chr6 scaffold_3, whole genome ... 42 0.045
tr|Q0STH7|Q0STH7_CLOPS Oxacillin resistance-related FmtC protein... 38 0.50
tr|Q5KIU5|Q5KIU5_CRYNE Carboxypeptidase D, putative OS=Cryptococ... 37 1.5
tr|Q8XKZ5|Q8XKZ5_CLOPE Putative uncharacterized protein CPE1247 ... 36 1.9
tr|Q0TR41|Q0TR41_CLOP1 Putative membrane protein OS=Clostridium ... 36 2.5
tr|B1RQI4|B1RQI4_CLOPE Putative membrane protein OS=Clostridium ... 36 2.5
tr|B1REM2|B1REM2_CLOPE Putative membrane protein OS=Clostridium ... 36 2.5
tr|B1R5M9|B1R5M9_CLOPE Putative membrane protein OS=Clostridium ... 36 2.5
tr|B1BRK7|B1BRK7_CLOPE Putative membrane protein OS=Clostridium ... 36 2.5
tr|B1BJN8|B1BJN8_CLOPE Lysyl transferase OS=Clostridium perfring... 36 2.5
tr|Q5R7Z1|Q5R7Z1_PONAB Putative uncharacterized protein DKFZp469... 35 3.2
tr|Q5KJ56|Q5KJ56_CRYNE Carboxypeptidase D, putative OS=Cryptococ... 35 3.2
tr|Q55T85|Q55T85_CRYNE Putative uncharacterized protein OS=Crypt... 35 3.2
tr|Q17CM8|Q17CM8_AEDAE Zinc finger protein OS=Aedes aegypti GN=A... 35 4.2
tr|Q5BL56|Q5BL56_XENTR High-mobility group protein 2-like 1 OS=X... 34 9.4

>tr|Q2QYU4|Q2QYU4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=LOC_Os12g01540 PE=4 SV=1
Length = 232

Score = 49.3 bits (116), Expect = 2e-04
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +1

Query: 157 GDVESQLVLRYEILCLRESCGSTEM--KVDTSEWSSFAEDCLSAGFPGNASKAFEKAI 324
GDVES L +RYE L LR++ S ++ +V EW +FA+D L GF ASKAF A+
Sbjct: 89 GDVESCLAMRYEALLLRQAEYSDDLHLQVSNEEWLTFAKDSLDNGFYTIASKAFANAL 146


>tr|Q0IQQ9|Q0IQQ9_ORYSJ Os12g0106100 protein OS=Oryza sativa subsp.
japonica GN=Os12g0106100 PE=4 SV=1
Length = 225

Score = 49.3 bits (116), Expect = 2e-04
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +1

Query: 157 GDVESQLVLRYEILCLRESCGSTEM--KVDTSEWSSFAEDCLSAGFPGNASKAFEKAI 324
GDVES L +RYE L LR++ S ++ +V EW +FA+D L GF ASKAF A+
Sbjct: 89 GDVESCLAMRYEALLLRQAEYSDDLHLQVSNEEWLTFAKDSLDNGFYTIASKAFANAL 146


>tr|B8BNT9|B8BNT9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_37169 PE=4 SV=1
Length = 195

Score = 49.3 bits (116), Expect = 2e-04
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +1

Query: 157 GDVESQLVLRYEILCLRESCGSTEM--KVDTSEWSSFAEDCLSAGFPGNASKAFEKAI 324
GDVES L +RYE L LR++ S ++ +V EW +FA+D L GF ASKAF A+
Sbjct: 89 GDVESCLAMRYEALLLRQAEYSDDLHLQVSNEEWLTFAKDSLDNGFYTIASKAFANAL 146


>tr|Q0IV79|Q0IV79_ORYSJ Os11g0106800 protein OS=Oryza sativa subsp.
japonica GN=Os11g0106800 PE=4 SV=1
Length = 210

Score = 47.8 bits (112), Expect = 6e-04
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +1

Query: 157 GDVESQLVLRYEILCLRESCGSTEM--KVDTSEWSSFAEDCLSAGFPGNASKAFEKAI 324
G+VES L +RYE L LR++ S ++ +V EW +FA+D L GF ASKAF A+
Sbjct: 91 GNVESCLAMRYEALLLRQAKYSDDLHLQVSNEEWLTFAKDSLDNGFYTIASKAFANAL 148


>tr|B8BIN1|B8BIN1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_34808 PE=4 SV=1
Length = 197

Score = 47.8 bits (112), Expect = 6e-04
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +1

Query: 157 GDVESQLVLRYEILCLRESCGSTEM--KVDTSEWSSFAEDCLSAGFPGNASKAFEKAI 324
G+VES L +RYE L LR++ S ++ +V EW +FA+D L GF ASKAF A+
Sbjct: 91 GNVESCLAMRYEALLLRQAKYSDDLHLQVSNEEWLTFAKDSLDNGFYTIASKAFANAL 148


>tr|Q9LMJ9|Q9LMJ9_ARATH F10K1.23 OS=Arabidopsis thaliana GN=F10K1.23
PE=4 SV=1
Length = 277

Score = 44.7 bits (104), Expect = 0.005
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1

Query: 157 GDVESQLVLRYEILCLRE--SCGSTEMKVDTSEWSSFAEDCLSAGFPGNASKAFEKAI 324
GD+ES L +RYE L LR+ S + V SEW+ FA + GFP A KA E A+
Sbjct: 113 GDMESCLAMRYEALNLRQLKSPSCLWLGVSHSEWTKFAVQSMENGFPSIAGKASENAL 170


>tr|Q8RX33|Q8RX33_ARATH Putative uncharacterized protein At1g07060
OS=Arabidopsis thaliana GN=At1g07060 PE=2 SV=1
Length = 233

Score = 44.7 bits (104), Expect = 0.005
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1

Query: 157 GDVESQLVLRYEILCLRE--SCGSTEMKVDTSEWSSFAEDCLSAGFPGNASKAFEKAI 324
GD+ES L +RYE L LR+ S + V SEW+ FA + GFP A KA E A+
Sbjct: 113 GDMESCLAMRYEALNLRQLKSPSCLWLGVSHSEWTKFAVQSMENGFPSIAGKASENAL 170


>tr|Q2RBM1|Q2RBM1_ORYSJ Expressed protein OS=Oryza sativa subsp.
japonica GN=LOC_Os11g01540 PE=4 SV=1
Length = 181

Score = 41.6 bits (96), Expect = 0.045
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1

Query: 169 SQLVLRYEILCLRESCGSTEM--KVDTSEWSSFAEDCLSAGFPGNASKAFEKAI 324
S L +RYE L LR++ S ++ +V EW +FA+D L GF ASKAF A+
Sbjct: 66 SCLAMRYEALLLRQAKYSDDLHLQVSNEEWLTFAKDSLDNGFYTIASKAFANAL 119


>tr|A7NY92|A7NY92_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024030001
PE=4 SV=1
Length = 255

Score = 41.6 bits (96), Expect = 0.045
Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +1

Query: 1 VESSAMSSKPTAAAMAESLRSRTWRCLRSSHHLRTSQKXXXXXXXXXXXXXXGDVESQLV 180
V S +++ E +RS + +R K GD S L
Sbjct: 48 VSKDVRSFLEVRSSLREFMRSESLSVIREIAEKNVEHKILILDFFVRAFALAGD--SCLA 105

Query: 181 LRYEILCLRE--SCGSTEMKVDTSEWSSFAEDCLSAGFPGNASKAFEKAI 324
LRYE L LRE S ++V EW +FAE L GF A+KA E A+
Sbjct: 106 LRYEALVLRELKSTSYQWLQVSHIEWLTFAEQALDNGFYSVAAKACENAL 155


>tr|Q0STH7|Q0STH7_CLOPS Oxacillin resistance-related FmtC protein
OS=Clostridium perfringens (strain SM101 / Type A)
GN=CPR_1258 PE=4 SV=1
Length = 851

Score = 38.1 bits (87), Expect = 0.50
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1

Query: 226 EMKVDTSEWSSFAEDCLSAGFPGNASKAFEKAISQT--EGYQTTNVDPQYEVQSCLKHVQ 399
E KVD E+ GN K+ + + S+ EGY V+P + + L +++
Sbjct: 619 EAKVDVKEFKVV----------GNKMKSLKTSRSKVTKEGYTFHMVEPPFS-REFLDYLK 667

Query: 400 HIMMPEINGRFDKGSSNGSFSDSLREKSSTAVSRYSEGLKRKERAKLQMLHEKNDFCID 576
I ++GR +KG S G F + K+ A+ R EG + K A + +++ F +D
Sbjct: 668 EISDEWLDGRKEKGFSVGFFDEDYLNKAPIAILRDREG-EIKAFANIMYMYDDESFSVD 725