DK950765
Clone id TST38A01NGRL0009_I24
Library
Length 679
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_I24. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CACGCACTGTGAGATCTCGCTTTCTAGCGGAGTTCGTCGTCCTGCGACATGGCTGCCCTC
GCTGCCGCGTCCGTCTCCAACGCTGCTGCTCTGGGCAACAGCCTTGCCACCAAGAATGCT
CTTCGCGAGAAGGTCCCTGTGGTGCAGGCCAGAGTCAGCATGAATTCTGAGTACTGGTAT
GGGCCCGATCGCCCCAAATACCTTGGCCCCTTCTCTGCCCAGACCCCTTCCTACCTCAAG
GGCGAGTTCCCTGGCGATTACGGCTGGGACACCGCTGGCCTATCTGCAGACCCTGAGGCA
TTTGCTAAGAACAGGGCCTTGGAGGTTATTCACAGCCGATGGGCCATGCTTGGAGCTTTG
GGATGCATCTTCCCAGAGGTTGCACAGAAGTATCTGAATGTGTCCTTCAAGGAGGCAGTC
TGGTTCAAGGCTGGAGCACAGATTTTCTCAGAGGGTGGGTTGGACTACCTCGGCAACCCC
AACCTTGTTCATGCACAGAGCATTCTCGCCATTTGGGCATGCCAGGTGGTGTTGATGGGA
GCTGCAGAGGGCTACCGCATCAATGGTTTATCAGGAGTTGGTGAGGGTGGTGACTTGTAT
CCTGGTGGGCAATACTTTGACCCCTTGGGCTTGGCTGATGACCCAGAGACTCTTGCTGAG
TTGAAAGTGAAAGAGCTCA
■■Homology search results ■■ -
sp_hit_id P27489
Definition sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum
Align length 192
Score (bit) 320.0
E-value 3.0e-87
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950765|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_I24, 5'
(679 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop... 320 3e-87
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty... 316 8e-86
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas... 280 7e-75
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas... 280 7e-75
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 278 2e-74
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 276 6e-74
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 276 7e-74
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 275 1e-73
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 274 3e-73
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop... 273 6e-73
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 273 8e-73
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 272 1e-72
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 272 1e-72
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 271 2e-72
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 271 2e-72
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 271 2e-72
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 271 3e-72
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 271 3e-72
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 270 4e-72
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 270 4e-72
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 270 5e-72
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 270 7e-72
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 270 7e-72
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 269 9e-72
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 269 9e-72
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 268 2e-71
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 268 2e-71
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 268 2e-71
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 268 2e-71
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 268 2e-71

>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13,
chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
Length = 265

Score = 320 bits (821), Expect = 3e-87
Identities = 154/192 (80%), Positives = 168/192 (87%), Gaps = 2/192 (1%)
Frame = +1

Query: 109 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 282
TKNA LR+ V + AR +M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 23 TKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGL 82

Query: 283 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 462
SADPEAFAKNRALEVIH RWAMLGALGCIFPEV +K++ V FKE VWFKAG+QIFS+GGL
Sbjct: 83 SADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGL 142

Query: 463 DYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 642
DYLGNPNLVHAQSILA+ QVVLMG EG+RINGL GVGEG DLYPGGQYFDPLGLADD
Sbjct: 143 DYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADD 202

Query: 643 PETLAELKVKEL 678
P T AELKVKE+
Sbjct: 203 PTTFAELKVKEI 214



Score = 30.8 bits (68), Expect = 6.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
+PG +D GL+ DP FA+ + E+ + R AM G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226


>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type
III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268

Score = 316 bits (809), Expect = 8e-86
Identities = 147/186 (79%), Positives = 161/186 (86%)
Frame = +1

Query: 121 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 300
LR+ R++M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEA
Sbjct: 32 LRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA 91

Query: 301 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
FA+NRALEVIH RWAMLGALGC+FPEV QK++ V FKE VWFKAG+QIFSEGGLDYLGNP
Sbjct: 92 FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151

Query: 481 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETLAE 660
NLVHAQSILA+ QV+LMG EG+RINGL GVGEG DLYPGGQYFDPLGLADDP T AE
Sbjct: 152 NLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAE 211

Query: 661 LKVKEL 678
LKVKE+
Sbjct: 212 LKVKEI 217


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263

Score = 280 bits (715), Expect = 7e-75
Identities = 139/169 (82%), Positives = 146/169 (86%), Gaps = 1/169 (0%)
Frame = +1

Query: 175 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 354
WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 355 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 534
ALGC+FPE+ K V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 535 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKEL 678
MG EGYR+ G +GEG D +YPGG FDPLGLADDP+T AELKVKEL
Sbjct: 166 MGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKEL 212


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263

Score = 280 bits (715), Expect = 7e-75
Identities = 139/169 (82%), Positives = 146/169 (86%), Gaps = 1/169 (0%)
Frame = +1

Query: 175 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 354
WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 355 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 534
ALGC+FPE+ K V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 535 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKEL 678
MG EGYR+ G +GEG D +YPGG FDPLGLADDP+T AELKVKEL
Sbjct: 166 MGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKEL 212


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
I, chloroplastic OS=Lemna gibba PE=3 SV=1
Length = 264

Score = 278 bits (710), Expect = 2e-74
Identities = 146/197 (74%), Positives = 153/197 (77%), Gaps = 8/197 (4%)
Frame = +1

Query: 112 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 270
++ L KV V R SM WYG DRPK+LGPFS QTPSYL GEFPGDYGWD
Sbjct: 20 RDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 271 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 450
TAGLSADPE FAKNR LEVIHSRWAMLGALGCIFPE+ K V F EAVWFKAGAQIFS
Sbjct: 80 TAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKN-GVQFGEAVWFKAGAQIFS 138

Query: 451 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 627
EGGLDYLGNPNLVHAQSILAIWA QVVLMG EGYR+ G +GEG D LYPGG FDPL
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG-GPLGEGLDPLYPGGA-FDPL 196

Query: 628 GLADDPETLAELKVKEL 678
GLADDPE AELKVKE+
Sbjct: 197 GLADDPEAFAELKVKEI 213



Score = 31.6 bits (70), Expect = 4.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
+PG +D GL+ DPEAFA+ + E+ + R AM G
Sbjct: 188 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
Length = 265

Score = 276 bits (707), Expect = 6e-74
Identities = 136/175 (77%), Positives = 146/175 (83%), Gaps = 1/175 (0%)
Frame = +1

Query: 157 SMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHS 336
S + WYGPDRPKYLGPFS Q PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH
Sbjct: 43 SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 102

Query: 337 RWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIW 516
RWAMLGALGC+FPE+ K V F EAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIW
Sbjct: 103 RWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIW 161

Query: 517 ACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKEL 678
ACQVVLMG EGYR+ G +GEG D +YPGG FDPLGLADDP+ AELKVKE+
Sbjct: 162 ACQVVLMGFVEGYRVGG-GPLGEGLDPIYPGGA-FDPLGLADDPDAFAELKVKEI 214



Score = 30.4 bits (67), Expect = 9.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
+PG +D GL+ DP+AFA+ + E+ + R AM G
Sbjct: 189 YPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 226


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
Length = 265

Score = 276 bits (706), Expect = 7e-74
Identities = 136/169 (80%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
Frame = +1

Query: 175 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 354
WYG DRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 49 WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 108

Query: 355 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 534
ALGC+FPE+ K V F EAVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAIWACQVVL
Sbjct: 109 ALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 167

Query: 535 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKEL 678
MG EGYR+ G +GEG D +YPGG FDPLGLADDPE AELKVKE+
Sbjct: 168 MGFVEGYRVGG-GPLGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEI 214



Score = 31.6 bits (70), Expect = 4.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
+PG +D GL+ DPEAFA+ + E+ + R AM G
Sbjct: 189 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
chloroplastic OS=Pinus thunbergii PE=2 SV=1
Length = 266

Score = 275 bits (704), Expect = 1e-73
Identities = 141/197 (71%), Positives = 153/197 (77%), Gaps = 8/197 (4%)
Frame = +1

Query: 112 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 270
+N L +KV QAR++M WYGPDRPKYLGPFS TPSYL GEFPGDYGWD
Sbjct: 22 QNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWD 81

Query: 271 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 450
TA +SADPE FAKNR LEVIH RWAMLGALGC+FPE+ K + F EAVWFKAGAQIFS
Sbjct: 82 TAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GLKFGEAVWFKAGAQIFS 140

Query: 451 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 627
EGGLDY GNPNL+HAQSILAIWACQVVLMG EGYR+ G +GEG D L PGG FDPL
Sbjct: 141 EGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGG-GTLGEGLDPLLPGGA-FDPL 198

Query: 628 GLADDPETLAELKVKEL 678
GLADDPE AELKVKE+
Sbjct: 199 GLADDPEACAELKVKEI 215


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
Length = 262

Score = 274 bits (701), Expect = 3e-73
Identities = 138/181 (76%), Positives = 150/181 (82%), Gaps = 1/181 (0%)
Frame = +1

Query: 139 VVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRA 318
V + +V+ + WYGPDR KYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR
Sbjct: 34 VGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 93

Query: 319 LEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQ 498
LEVIHSRWAMLGALGC+FPE+ + V F EAVWFKAG+QIFSEGGLDYLGNP+L+HAQ
Sbjct: 94 LEVIHSRWAMLGALGCVFPELLSRN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 152

Query: 499 SILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKE 675
SILAIWACQVVLMGA EGYRI G +GE D LYPGG FDPLGLADDPE AELKVKE
Sbjct: 153 SILAIWACQVVLMGAVEGYRIAG-GPLGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKE 210

Query: 676 L 678
L
Sbjct: 211 L 211



Score = 30.8 bits (68), Expect = 6.9
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
+PG +D GL+ DPEAFA+ + E+ + R AM G
Sbjct: 186 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 223


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
Length = 265

Score = 273 bits (698), Expect = 6e-73
Identities = 140/194 (72%), Positives = 154/194 (79%), Gaps = 8/194 (4%)
Frame = +1

Query: 121 LREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAG 279
+R++ QAR +M WYGPDRPKYLGPFS Q PSYL GEFPGDYGWDTAG
Sbjct: 24 IRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAG 83

Query: 280 LSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGG 459
LSADPE FA+NR LEVIHSRWAMLGALGC FPE+ +K V F EAVWFKAG+QIF+EGG
Sbjct: 84 LSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKN-GVKFGEAVWFKAGSQIFAEGG 142

Query: 460 LDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLA 636
LDYLGNPNL+HAQSILAIWA QVVLMG EGYR+ G +GEG D LYPGG FDPLGLA
Sbjct: 143 LDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGG-GPLGEGLDPLYPGGA-FDPLGLA 200

Query: 637 DDPETLAELKVKEL 678
DDP++ AELKVKEL
Sbjct: 201 DDPDSFAELKVKEL 214


tr_hit_id Q9XQB1
Definition tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding protein OS=Phaseolus aureus
Align length 188
Score (bit) 320.0
E-value 5.0e-86
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950765|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_I24, 5'
(679 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding pr... 320 5e-86
tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding prote... 318 2e-85
tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, who... 317 6e-85
tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis... 317 6e-85
tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten... 316 1e-84
tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome... 315 1e-84
tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza... 315 2e-84
tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding prote... 314 3e-84
tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subs... 313 5e-84
tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplas... 312 1e-83
tr|Q9S7M0|Q9S7M0_ARATH Type III chlorophyll a/b binding protein ... 311 2e-83
tr|B7SAW4|B7SAW4_BAMOL Chloroplast chlorophyll a/b binding prote... 311 2e-83
tr|Q9SDT2|Q9SDT2_DAUCA Chlorophyll a/b-binding protein OS=Daucus... 311 2e-83
tr|Q5I8X1|Q5I8X1_PEA Light-harvesting chlorophyll-a/b binding pr... 311 2e-83
tr|A9PJV4|A9PJV4_POPJC Putative uncharacterized protein OS=Popul... 310 5e-83
tr|B6SUM9|B6SUM9_MAIZE Chlorophyll a-b binding protein of LHCII ... 309 1e-82
tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b b... 302 1e-80
tr|Q39341|Q39341_BRANA LHCII Type III chlorophyll a/b binding pr... 300 6e-80
tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding ... 297 4e-79
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b... 289 1e-76
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote... 286 6e-76
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea... 286 1e-75
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea... 286 1e-75
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea... 286 1e-75
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ... 285 2e-75
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea... 284 4e-75
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea... 284 4e-75
tr|B6T1H1|B6T1H1_MAIZE Chlorophyll a-b binding protein OS=Zea ma... 283 5e-75
tr|B6SZT9|B6SZT9_MAIZE Chlorophyll a-b binding protein OS=Zea ma... 283 5e-75
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea... 283 7e-75

>tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding
protein OS=Phaseolus aureus GN=CipLhcb3 PE=2 SV=1
Length = 269

Score = 320 bits (820), Expect = 5e-86
Identities = 153/188 (81%), Positives = 164/188 (87%)
Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
N LR+ V + + SM++E WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31 NPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
EAFAKNRALEVIH RWAMLGALGCI PEV +K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91 EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
NPNLVHAQSILA+ QVVLMG EG+RINGL GVGEG +LYPGGQYFDPLGLADDP T
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPATF 210

Query: 655 AELKVKEL 678
AELKVKE+
Sbjct: 211 AELKVKEI 218


>tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding protein
cab-BO3 OS=Bambusa oldhamii PE=2 SV=1
Length = 267

Score = 318 bits (815), Expect = 2e-85
Identities = 153/192 (79%), Positives = 164/192 (85%), Gaps = 2/192 (1%)
Frame = +1

Query: 109 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 282
T NA LR+ R++M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 25 TANASPLRDVAAAANGRITMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGL 84

Query: 283 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 462
SADPEAFA+NRALEVIH RWAMLGALGCI PEV QK+L V FKE VWFKAGAQIFSEGGL
Sbjct: 85 SADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGL 144

Query: 463 DYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 642
DYLGNPNLVHAQSILA+ QV+LMG EGYRINGL GVGEG DLYPGGQYFDPLGLADD
Sbjct: 145 DYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLPGVGEGNDLYPGGQYFDPLGLADD 204

Query: 643 PETLAELKVKEL 678
P T AELKVKE+
Sbjct: 205 PVTFAELKVKEI 216


>tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00009737001 PE=4 SV=1
Length = 264

Score = 317 bits (811), Expect = 6e-85
Identities = 151/188 (80%), Positives = 161/188 (85%)
Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
N LRE VP+ + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26 NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 86 EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 145

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
NPNLVHAQSILA+ QVVLMG EGYRINGL GVGEG DLYPGG YFDPLGLADDP T
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPLGLADDPVTF 205

Query: 655 AELKVKEL 678
AELKVKE+
Sbjct: 206 AELKVKEI 213


>tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_001096 PE=4 SV=1
Length = 269

Score = 317 bits (811), Expect = 6e-85
Identities = 151/188 (80%), Positives = 161/188 (85%)
Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
N LRE VP+ + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 31 NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 90

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91 EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
NPNLVHAQSILA+ QVVLMG EGYRINGL GVGEG DLYPGG YFDPLGLADDP T
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPLGLADDPVTF 210

Query: 655 AELKVKEL 678
AELKVKE+
Sbjct: 211 AELKVKEI 218


>tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_223248 PE=4 SV=1
Length = 266

Score = 316 bits (809), Expect = 1e-84
Identities = 152/194 (78%), Positives = 164/194 (84%), Gaps = 6/194 (3%)
Frame = +1

Query: 115 NALREKVPVVQARVSM------NSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTA 276
N L +KV QARV M + WYGPDRP +LGPFS TPSYLKGEFPGDYGWDTA
Sbjct: 22 NELAQKVGSNQARVVMRGSKSSSGSMWYGPDRPLFLGPFSGNTPSYLKGEFPGDYGWDTA 81

Query: 277 GLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEG 456
GLSADPE+FA+NRALE+IH RWAMLGALGCI PE+ QKY V+ KE VWFKAGAQIFS+G
Sbjct: 82 GLSADPESFARNRALELIHGRWAMLGALGCITPELLQKYSRVTLKEPVWFKAGAQIFSDG 141

Query: 457 GLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLA 636
GLDYLGNPNL+HAQSILA+WA QVVLMGA E YR NGL GVGEGGDLYPGG+YFDPLGLA
Sbjct: 142 GLDYLGNPNLIHAQSILAVWAVQVVLMGAVEAYRTNGLPGVGEGGDLYPGGKYFDPLGLA 201

Query: 637 DDPETLAELKVKEL 678
DDPETLAELKVKEL
Sbjct: 202 DDPETLAELKVKEL 215


>tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027591001
PE=4 SV=1
Length = 264

Score = 315 bits (808), Expect = 1e-84
Identities = 149/188 (79%), Positives = 163/188 (86%)
Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
N LR+ VP+ + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26 NPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
EAFA+NRALEVIH RWAMLGALGCI PEV +K+L V FKE +WFKAGAQIFSEGGLDYLG
Sbjct: 86 EAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLG 145

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
NPNLVHAQSILA+ QVVLMG EG+RINGL GVG+G +LYPGGQYFDPLGLADDP T
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTF 205

Query: 655 AELKVKEL 678
AELKVKE+
Sbjct: 206 AELKVKEI 213


>tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26482 PE=4 SV=1
Length = 266

Score = 315 bits (806), Expect = 2e-84
Identities = 148/186 (79%), Positives = 161/186 (86%)
Frame = +1

Query: 121 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 300
LR+ R++M+ E WYGPDR KYLGPFSAQTPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30 LRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 301 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90 FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 481 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETLAE 660
NLVHAQSILA+ QVVLMG EGYRINGL GVG+G DLYPGGQYFDPLGLADDP T AE
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAE 209

Query: 661 LKVKEL 678
LKVKE+
Sbjct: 210 LKVKEI 215


>tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding protein
OS=Medicago falcata GN=CAB PE=2 SV=1
Length = 266

Score = 314 bits (805), Expect = 3e-84
Identities = 150/188 (79%), Positives = 163/188 (86%)
Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
N LR+ V + +R +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 28 NPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 87

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
EAFAKNRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 88 EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 147

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
NPNLVHAQSILA+ QVVLMG EG+RINGL GVGEG +LYPGGQYFDPLGLADDP T
Sbjct: 148 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTF 207

Query: 655 AELKVKEL 678
AELKVKE+
Sbjct: 208 AELKVKEI 215


>tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subsp.
japonica GN=P0406F06.32 PE=2 SV=1
Length = 266

Score = 313 bits (803), Expect = 5e-84
Identities = 147/186 (79%), Positives = 161/186 (86%)
Frame = +1

Query: 121 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 300
+R+ R++M+ E WYGPDR KYLGPFSAQTPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30 VRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 301 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90 FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 481 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETLAE 660
NLVHAQSILA+ QVVLMG EGYRINGL GVG+G DLYPGGQYFDPLGLADDP T AE
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAE 209

Query: 661 LKVKEL 678
LKVKE+
Sbjct: 210 LKVKEI 215


>tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplast
chlorophyll-a/b binding protein) OS=Pisum sativum
GN=Lhcb3*1 PE=2 SV=1
Length = 265

Score = 312 bits (799), Expect = 1e-83
Identities = 148/188 (78%), Positives = 162/188 (86%)
Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
N LR+ V + ++ +M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 27 NPLRDVVAMGTSKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 86

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
EAFAKNRALEVIH RWAMLGALGCI PEV QK++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 87 EAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 146

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
NPNLVHAQSILA+ Q+VLMG EG+RINGL VGEG DLYPGGQYFDPLGLADDP T
Sbjct: 147 NPNLVHAQSILAVLGFQIVLMGLVEGFRINGLPDVGEGNDLYPGGQYFDPLGLADDPVTF 206

Query: 655 AELKVKEL 678
AELKVKE+
Sbjct: 207 AELKVKEI 214