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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950765
Clone id TST38A01NGRL0009_I24
Library
Length 679
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_I24. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CACGCACTGTGAGATCTCGCTTTCTAGCGGAGTTCGTCGTCCTGCGACATGGCTGCCCTC
GCTGCCGCGTCCGTCTCCAACGCTGCTGCTCTGGGCAACAGCCTTGCCACCAAGAATGCT
CTTCGCGAGAAGGTCCCTGTGGTGCAGGCCAGAGTCAGCATGAATTCTGAGTACTGGTAT
GGGCCCGATCGCCCCAAATACCTTGGCCCCTTCTCTGCCCAGACCCCTTCCTACCTCAAG
GGCGAGTTCCCTGGCGATTACGGCTGGGACACCGCTGGCCTATCTGCAGACCCTGAGGCA
TTTGCTAAGAACAGGGCCTTGGAGGTTATTCACAGCCGATGGGCCATGCTTGGAGCTTTG
GGATGCATCTTCCCAGAGGTTGCACAGAAGTATCTGAATGTGTCCTTCAAGGAGGCAGTC
TGGTTCAAGGCTGGAGCACAGATTTTCTCAGAGGGTGGGTTGGACTACCTCGGCAACCCC
AACCTTGTTCATGCACAGAGCATTCTCGCCATTTGGGCATGCCAGGTGGTGTTGATGGGA
GCTGCAGAGGGCTACCGCATCAATGGTTTATCAGGAGTTGGTGAGGGTGGTGACTTGTAT
CCTGGTGGGCAATACTTTGACCCCTTGGGCTTGGCTGATGACCCAGAGACTCTTGCTGAG
TTGAAAGTGAAAGAGCTCA
■■Homology search results ■■ -
sp_hit_id P27489
Definition sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum
Align length 192
Score (bit) 320.0
E-value 3.0e-87
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950765|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_I24, 5'
         (679 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...   320   3e-87
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...   316   8e-86
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   280   7e-75
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   280   7e-75
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   278   2e-74
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   276   6e-74
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   276   7e-74
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   275   1e-73
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   274   3e-73
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   273   6e-73
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   273   8e-73
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   272   1e-72
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   272   1e-72
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   271   2e-72
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   271   2e-72
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   271   2e-72
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   271   3e-72
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   271   3e-72
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   270   4e-72
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   270   4e-72
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   270   5e-72
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   270   7e-72
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   270   7e-72
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   269   9e-72
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   269   9e-72
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   268   2e-71
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   268   2e-71
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   268   2e-71
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   268   2e-71
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   268   2e-71

>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13,
           chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
          Length = 265

 Score =  320 bits (821), Expect = 3e-87
 Identities = 154/192 (80%), Positives = 168/192 (87%), Gaps = 2/192 (1%)
 Frame = +1

Query: 109 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 282
           TKNA  LR+ V +  AR +M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 23  TKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGL 82

Query: 283 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 462
           SADPEAFAKNRALEVIH RWAMLGALGCIFPEV +K++ V FKE VWFKAG+QIFS+GGL
Sbjct: 83  SADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGL 142

Query: 463 DYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 642
           DYLGNPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG DLYPGGQYFDPLGLADD
Sbjct: 143 DYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADD 202

Query: 643 PETLAELKVKEL 678
           P T AELKVKE+
Sbjct: 203 PTTFAELKVKEI 214



 Score = 30.8 bits (68), Expect = 6.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
           +PG   +D  GL+ DP  FA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226


>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type
           III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1
          Length = 268

 Score =  316 bits (809), Expect = 8e-86
 Identities = 147/186 (79%), Positives = 161/186 (86%)
 Frame = +1

Query: 121 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 300
           LR+       R++M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEA
Sbjct: 32  LRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA 91

Query: 301 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
           FA+NRALEVIH RWAMLGALGC+FPEV QK++ V FKE VWFKAG+QIFSEGGLDYLGNP
Sbjct: 92  FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151

Query: 481 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETLAE 660
           NLVHAQSILA+   QV+LMG  EG+RINGL GVGEG DLYPGGQYFDPLGLADDP T AE
Sbjct: 152 NLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAE 211

Query: 661 LKVKEL 678
           LKVKE+
Sbjct: 212 LKVKEI 217


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  280 bits (715), Expect = 7e-75
 Identities = 139/169 (82%), Positives = 146/169 (86%), Gaps = 1/169 (0%)
 Frame = +1

Query: 175 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 354
           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 355 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 534
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 535 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKEL 678
           MG  EGYR+ G   +GEG D +YPGG  FDPLGLADDP+T AELKVKEL
Sbjct: 166 MGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKEL 212


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  280 bits (715), Expect = 7e-75
 Identities = 139/169 (82%), Positives = 146/169 (86%), Gaps = 1/169 (0%)
 Frame = +1

Query: 175 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 354
           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 355 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 534
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 535 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKEL 678
           MG  EGYR+ G   +GEG D +YPGG  FDPLGLADDP+T AELKVKEL
Sbjct: 166 MGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKEL 212


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  278 bits (710), Expect = 2e-74
 Identities = 146/197 (74%), Positives = 153/197 (77%), Gaps = 8/197 (4%)
 Frame = +1

Query: 112 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 270
           ++ L  KV V   R SM           WYG DRPK+LGPFS QTPSYL GEFPGDYGWD
Sbjct: 20  RDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 271 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 450
           TAGLSADPE FAKNR LEVIHSRWAMLGALGCIFPE+  K   V F EAVWFKAGAQIFS
Sbjct: 80  TAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKN-GVQFGEAVWFKAGAQIFS 138

Query: 451 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 627
           EGGLDYLGNPNLVHAQSILAIWA QVVLMG  EGYR+ G   +GEG D LYPGG  FDPL
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG-GPLGEGLDPLYPGGA-FDPL 196

Query: 628 GLADDPETLAELKVKEL 678
           GLADDPE  AELKVKE+
Sbjct: 197 GLADDPEAFAELKVKEI 213



 Score = 31.6 bits (70), Expect = 4.1
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 188 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  276 bits (707), Expect = 6e-74
 Identities = 136/175 (77%), Positives = 146/175 (83%), Gaps = 1/175 (0%)
 Frame = +1

Query: 157 SMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHS 336
           S  +  WYGPDRPKYLGPFS Q PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH 
Sbjct: 43  SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 102

Query: 337 RWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIW 516
           RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIW
Sbjct: 103 RWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIW 161

Query: 517 ACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKEL 678
           ACQVVLMG  EGYR+ G   +GEG D +YPGG  FDPLGLADDP+  AELKVKE+
Sbjct: 162 ACQVVLMGFVEGYRVGG-GPLGEGLDPIYPGGA-FDPLGLADDPDAFAELKVKEI 214



 Score = 30.4 bits (67), Expect = 9.1
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
           +PG   +D  GL+ DP+AFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 226


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  276 bits (706), Expect = 7e-74
 Identities = 136/169 (80%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
 Frame = +1

Query: 175 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 354
           WYG DRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 49  WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 108

Query: 355 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 534
           ALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAIWACQVVL
Sbjct: 109 ALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 167

Query: 535 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKEL 678
           MG  EGYR+ G   +GEG D +YPGG  FDPLGLADDPE  AELKVKE+
Sbjct: 168 MGFVEGYRVGG-GPLGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEI 214



 Score = 31.6 bits (70), Expect = 4.1
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  275 bits (704), Expect = 1e-73
 Identities = 141/197 (71%), Positives = 153/197 (77%), Gaps = 8/197 (4%)
 Frame = +1

Query: 112 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 270
           +N L +KV   QAR++M           WYGPDRPKYLGPFS  TPSYL GEFPGDYGWD
Sbjct: 22  QNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWD 81

Query: 271 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 450
           TA +SADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   + F EAVWFKAGAQIFS
Sbjct: 82  TAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GLKFGEAVWFKAGAQIFS 140

Query: 451 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 627
           EGGLDY GNPNL+HAQSILAIWACQVVLMG  EGYR+ G   +GEG D L PGG  FDPL
Sbjct: 141 EGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGG-GTLGEGLDPLLPGGA-FDPL 198

Query: 628 GLADDPETLAELKVKEL 678
           GLADDPE  AELKVKE+
Sbjct: 199 GLADDPEACAELKVKEI 215


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  274 bits (701), Expect = 3e-73
 Identities = 138/181 (76%), Positives = 150/181 (82%), Gaps = 1/181 (0%)
 Frame = +1

Query: 139 VVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRA 318
           V + +V+ +   WYGPDR KYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR 
Sbjct: 34  VGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 93

Query: 319 LEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQ 498
           LEVIHSRWAMLGALGC+FPE+  +   V F EAVWFKAG+QIFSEGGLDYLGNP+L+HAQ
Sbjct: 94  LEVIHSRWAMLGALGCVFPELLSRN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 152

Query: 499 SILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKE 675
           SILAIWACQVVLMGA EGYRI G   +GE  D LYPGG  FDPLGLADDPE  AELKVKE
Sbjct: 153 SILAIWACQVVLMGAVEGYRIAG-GPLGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKE 210

Query: 676 L 678
           L
Sbjct: 211 L 211



 Score = 30.8 bits (68), Expect = 6.9
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 186 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 223


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  273 bits (698), Expect = 6e-73
 Identities = 140/194 (72%), Positives = 154/194 (79%), Gaps = 8/194 (4%)
 Frame = +1

Query: 121 LREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAG 279
           +R++    QAR +M           WYGPDRPKYLGPFS Q PSYL GEFPGDYGWDTAG
Sbjct: 24  IRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAG 83

Query: 280 LSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGG 459
           LSADPE FA+NR LEVIHSRWAMLGALGC FPE+ +K   V F EAVWFKAG+QIF+EGG
Sbjct: 84  LSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKN-GVKFGEAVWFKAGSQIFAEGG 142

Query: 460 LDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLA 636
           LDYLGNPNL+HAQSILAIWA QVVLMG  EGYR+ G   +GEG D LYPGG  FDPLGLA
Sbjct: 143 LDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGG-GPLGEGLDPLYPGGA-FDPLGLA 200

Query: 637 DDPETLAELKVKEL 678
           DDP++ AELKVKEL
Sbjct: 201 DDPDSFAELKVKEL 214
tr_hit_id Q9XQB1
Definition tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding protein OS=Phaseolus aureus
Align length 188
Score (bit) 320.0
E-value 5.0e-86
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950765|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_I24, 5'
         (679 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding pr...   320   5e-86
tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding prote...   318   2e-85
tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, who...   317   6e-85
tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis...   317   6e-85
tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten...   316   1e-84
tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome...   315   1e-84
tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza...   315   2e-84
tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding prote...   314   3e-84
tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subs...   313   5e-84
tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplas...   312   1e-83
tr|Q9S7M0|Q9S7M0_ARATH Type III chlorophyll a/b binding protein ...   311   2e-83
tr|B7SAW4|B7SAW4_BAMOL Chloroplast chlorophyll a/b binding prote...   311   2e-83
tr|Q9SDT2|Q9SDT2_DAUCA Chlorophyll a/b-binding protein OS=Daucus...   311   2e-83
tr|Q5I8X1|Q5I8X1_PEA Light-harvesting chlorophyll-a/b binding pr...   311   2e-83
tr|A9PJV4|A9PJV4_POPJC Putative uncharacterized protein OS=Popul...   310   5e-83
tr|B6SUM9|B6SUM9_MAIZE Chlorophyll a-b binding protein of LHCII ...   309   1e-82
tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b b...   302   1e-80
tr|Q39341|Q39341_BRANA LHCII Type III chlorophyll a/b binding pr...   300   6e-80
tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding ...   297   4e-79
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   289   1e-76
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   286   6e-76
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   286   1e-75
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   286   1e-75
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   286   1e-75
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   285   2e-75
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   284   4e-75
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   284   4e-75
tr|B6T1H1|B6T1H1_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   283   5e-75
tr|B6SZT9|B6SZT9_MAIZE Chlorophyll a-b binding protein OS=Zea ma...   283   5e-75
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   283   7e-75

>tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding
           protein OS=Phaseolus aureus GN=CipLhcb3 PE=2 SV=1
          Length = 269

 Score =  320 bits (820), Expect = 5e-86
 Identities = 153/188 (81%), Positives = 164/188 (87%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LR+ V +   + SM++E WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFAKNRALEVIH RWAMLGALGCI PEV +K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG +LYPGGQYFDPLGLADDP T 
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPATF 210

Query: 655 AELKVKEL 678
           AELKVKE+
Sbjct: 211 AELKVKEI 218


>tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding protein
           cab-BO3 OS=Bambusa oldhamii PE=2 SV=1
          Length = 267

 Score =  318 bits (815), Expect = 2e-85
 Identities = 153/192 (79%), Positives = 164/192 (85%), Gaps = 2/192 (1%)
 Frame = +1

Query: 109 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 282
           T NA  LR+       R++M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 25  TANASPLRDVAAAANGRITMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGL 84

Query: 283 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 462
           SADPEAFA+NRALEVIH RWAMLGALGCI PEV QK+L V FKE VWFKAGAQIFSEGGL
Sbjct: 85  SADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGL 144

Query: 463 DYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 642
           DYLGNPNLVHAQSILA+   QV+LMG  EGYRINGL GVGEG DLYPGGQYFDPLGLADD
Sbjct: 145 DYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLPGVGEGNDLYPGGQYFDPLGLADD 204

Query: 643 PETLAELKVKEL 678
           P T AELKVKE+
Sbjct: 205 PVTFAELKVKEI 216


>tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00009737001 PE=4 SV=1
          Length = 264

 Score =  317 bits (811), Expect = 6e-85
 Identities = 151/188 (80%), Positives = 161/188 (85%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 145

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
           NPNLVHAQSILA+   QVVLMG  EGYRINGL GVGEG DLYPGG YFDPLGLADDP T 
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPLGLADDPVTF 205

Query: 655 AELKVKEL 678
           AELKVKE+
Sbjct: 206 AELKVKEI 213


>tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001096 PE=4 SV=1
          Length = 269

 Score =  317 bits (811), Expect = 6e-85
 Identities = 151/188 (80%), Positives = 161/188 (85%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 31  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 90

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
           NPNLVHAQSILA+   QVVLMG  EGYRINGL GVGEG DLYPGG YFDPLGLADDP T 
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPLGLADDPVTF 210

Query: 655 AELKVKEL 678
           AELKVKE+
Sbjct: 211 AELKVKEI 218


>tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_223248 PE=4 SV=1
          Length = 266

 Score =  316 bits (809), Expect = 1e-84
 Identities = 152/194 (78%), Positives = 164/194 (84%), Gaps = 6/194 (3%)
 Frame = +1

Query: 115 NALREKVPVVQARVSM------NSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTA 276
           N L +KV   QARV M      +   WYGPDRP +LGPFS  TPSYLKGEFPGDYGWDTA
Sbjct: 22  NELAQKVGSNQARVVMRGSKSSSGSMWYGPDRPLFLGPFSGNTPSYLKGEFPGDYGWDTA 81

Query: 277 GLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEG 456
           GLSADPE+FA+NRALE+IH RWAMLGALGCI PE+ QKY  V+ KE VWFKAGAQIFS+G
Sbjct: 82  GLSADPESFARNRALELIHGRWAMLGALGCITPELLQKYSRVTLKEPVWFKAGAQIFSDG 141

Query: 457 GLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLA 636
           GLDYLGNPNL+HAQSILA+WA QVVLMGA E YR NGL GVGEGGDLYPGG+YFDPLGLA
Sbjct: 142 GLDYLGNPNLIHAQSILAVWAVQVVLMGAVEAYRTNGLPGVGEGGDLYPGGKYFDPLGLA 201

Query: 637 DDPETLAELKVKEL 678
           DDPETLAELKVKEL
Sbjct: 202 DDPETLAELKVKEL 215


>tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027591001
           PE=4 SV=1
          Length = 264

 Score =  315 bits (808), Expect = 1e-84
 Identities = 149/188 (79%), Positives = 163/188 (86%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LR+ VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFA+NRALEVIH RWAMLGALGCI PEV +K+L V FKE +WFKAGAQIFSEGGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLG 145

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVG+G +LYPGGQYFDPLGLADDP T 
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTF 205

Query: 655 AELKVKEL 678
           AELKVKE+
Sbjct: 206 AELKVKEI 213


>tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26482 PE=4 SV=1
          Length = 266

 Score =  315 bits (806), Expect = 2e-84
 Identities = 148/186 (79%), Positives = 161/186 (86%)
 Frame = +1

Query: 121 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 300
           LR+       R++M+ E WYGPDR KYLGPFSAQTPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30  LRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 301 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
           FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90  FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 481 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETLAE 660
           NLVHAQSILA+   QVVLMG  EGYRINGL GVG+G DLYPGGQYFDPLGLADDP T AE
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAE 209

Query: 661 LKVKEL 678
           LKVKE+
Sbjct: 210 LKVKEI 215


>tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding protein
           OS=Medicago falcata GN=CAB PE=2 SV=1
          Length = 266

 Score =  314 bits (805), Expect = 3e-84
 Identities = 150/188 (79%), Positives = 163/188 (86%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LR+ V +  +R +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 28  NPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 87

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFAKNRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 88  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 147

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
           NPNLVHAQSILA+   QVVLMG  EG+RINGL GVGEG +LYPGGQYFDPLGLADDP T 
Sbjct: 148 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTF 207

Query: 655 AELKVKEL 678
           AELKVKE+
Sbjct: 208 AELKVKEI 215


>tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subsp.
           japonica GN=P0406F06.32 PE=2 SV=1
          Length = 266

 Score =  313 bits (803), Expect = 5e-84
 Identities = 147/186 (79%), Positives = 161/186 (86%)
 Frame = +1

Query: 121 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 300
           +R+       R++M+ E WYGPDR KYLGPFSAQTPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30  VRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 301 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
           FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90  FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 481 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETLAE 660
           NLVHAQSILA+   QVVLMG  EGYRINGL GVG+G DLYPGGQYFDPLGLADDP T AE
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAE 209

Query: 661 LKVKEL 678
           LKVKE+
Sbjct: 210 LKVKEI 215


>tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplast
           chlorophyll-a/b binding protein) OS=Pisum sativum
           GN=Lhcb3*1 PE=2 SV=1
          Length = 265

 Score =  312 bits (799), Expect = 1e-83
 Identities = 148/188 (78%), Positives = 162/188 (86%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LR+ V +  ++ +M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 27  NPLRDVVAMGTSKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 86

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFAKNRALEVIH RWAMLGALGCI PEV QK++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 87  EAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 146

Query: 475 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 654
           NPNLVHAQSILA+   Q+VLMG  EG+RINGL  VGEG DLYPGGQYFDPLGLADDP T 
Sbjct: 147 NPNLVHAQSILAVLGFQIVLMGLVEGFRINGLPDVGEGNDLYPGGQYFDPLGLADDPVTF 206

Query: 655 AELKVKEL 678
           AELKVKE+
Sbjct: 207 AELKVKEI 214