DK950785 |
Clone id |
TST38A01NGRL0009_J23 |
Library |
TST38 |
Length |
662 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_J23. 5' end sequence. |
Accession |
DK950785 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3050Contig1 |
Sequence |
GTGACGATCCCTCTCCTTGTGAAGTGCAATGGAGCATTGGAACTACGGCAGCAGGGCTTC CCAACAGCAGGGACATTCTCAAGCTGGGCAATTGGGATATCCTCCTGGTTCTTTTGGCGG TCAGCAGGGTGCCGCTTCTGTTGCCACACCTTATAGTGCTCAGCTGTTTCCACAGCCAAG TTTTGGTCAAGCTTTTGGCCAGCAGATACTTGGATCAGGTGGAAAGTCGGGAGGTGCTGA TGATTTTCAAGGAGGTGCAATAGGTTCTTCAGGGCTGACTGGTGGCAACATGTCAGGTCT TTATGGCTTGGATTCAAAGTTTCCAAGCTCTGGATTTGGAAGTGTTGGTGCTTCTCCAGC GGCATTTAATCAGAAAGCAGACCAGTTGGGTGCCTTAGGGCAATATTCTAAGAGTCAGTC TCAGTTCTTGGCTGCGGATGGTCATAGTGATGCTTTGAAACGCTATTCTGAATCTCAGTT ATTACAGTCGGCTTTACGTCAAGGGGCTGCACTGGAAGCTGGTGTCAGGTCTCAATCAGA GTATCTTTCAGGATCGAGAAGTTCTGCAATTACAGCCGCTGGTGGGGGGGCTTATGGATC TGGGAGGGAACTTTTAGGTAGCACTTATGGTGTTACTCGATCTGAAGCTGAAGCTGCACT TT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5RC41 |
Definition |
sp|Q5RC41|RBM14_PONAB RNA-binding protein 14 OS=Pongo abelii |
Align length |
203 |
Score (bit) |
40.4 |
E-value |
0.008 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950785|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_J23, 5' (662 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q5RC41|RBM14_PONAB RNA-binding protein 14 OS=Pongo abelii GN=... 40 0.008 sp|Q96PK6|RBM14_HUMAN RNA-binding protein 14 OS=Homo sapiens GN=... 40 0.008 sp|Q5EA36|RBM14_BOVIN RNA-binding protein 14 OS=Bos taurus GN=RB... 40 0.008 sp|Q6P0U9|NUPL2_DANRE Nucleoporin-like 2 OS=Danio rerio GN=nupl2... 39 0.032 sp|Q8C2Q3|RBM14_MOUSE RNA-binding protein 14 OS=Mus musculus GN=... 37 0.071 sp|A2A699|F1712_MOUSE Protein FAM171A2 OS=Mus musculus GN=Fam171... 37 0.12 sp|O76743|GLH4_CAEEL ATP-dependent RNA helicase glh-4 OS=Caenorh... 36 0.16 sp|Q86YZ3|HORN_HUMAN Hornerin OS=Homo sapiens GN=HRNR PE=1 SV=2 34 0.60 sp|P53992|SC24C_HUMAN Protein transport protein Sec24C OS=Homo s... 33 1.8 sp|P56959|FUS_MOUSE RNA-binding protein FUS OS=Mus musculus GN=F... 32 2.3 sp|P61427|THIC_RHOPA Thiamine biosynthesis protein thiC OS=Rhodo... 32 3.0 sp|P02535|K1C10_MOUSE Keratin, type I cytoskeletal 10 OS=Mus mus... 32 3.0 sp|P35637|FUS_HUMAN RNA-binding protein FUS OS=Homo sapiens GN=F... 32 3.0 sp|Q5D862|FILA2_HUMAN Filaggrin-2 OS=Homo sapiens GN=FLG2 PE=1 SV=1 32 3.0 sp|Q7SGV1|SNX4_NEUCR Sorting nexin-4 OS=Neurospora crassa GN=snx... 32 3.9 sp|P35822|PTPRK_MOUSE Receptor-type tyrosine-protein phosphatase... 32 3.9 sp|Q15262|PTPRK_HUMAN Receptor-type tyrosine-protein phosphatase... 32 3.9 sp|P82160|MLE3_MUGCA Myosin light chain 3, skeletal muscle isofo... 32 3.9 sp|Q6IFW6|K1C10_RAT Keratin, type I cytoskeletal 10 OS=Rattus no... 32 3.9 sp|Q1GP30|HIS8_SPHAL Histidinol-phosphate aminotransferase OS=Sp... 32 3.9 sp|Q3UHC0|TNR6C_MOUSE Trinucleotide repeat-containing gene 6C pr... 31 5.1 sp|Q9V6B9|NUP54_DROME Probable nucleoporin Nup54 OS=Drosophila m... 31 5.1 sp|Q6EIZ0|K1C10_CANFA Keratin, type I cytoskeletal 10 OS=Canis f... 31 5.1 sp|O42970|YB95_SCHPO Uncharacterized serine-rich protein C1E8.05... 31 6.7 sp|Q48478|RFBA2_KLEPN O-antigen export system permease protein r... 31 6.7 sp|Q5JE39|GLKA_PYRKO ADP-dependent glucokinase OS=Pyrococcus kod... 31 6.7 sp|Q944P7|AMPL3_ARATH Leucine aminopeptidase 3, chloroplastic OS... 31 6.7 sp|Q65RT5|Y1718_MANSM UPF0042 protein MS1718 OS=Mannheimia succi... 30 8.7 sp|Q9T1R6|VP32_BPAPS Putative DNA transfer protein p32 OS=Acyrth... 30 8.7 sp|Q6YHU6|THADA_HUMAN Thyroid adenoma-associated protein OS=Homo... 30 8.7
>sp|Q5RC41|RBM14_PONAB RNA-binding protein 14 OS=Pongo abelii GN=RBM14 PE=2 SV=1 Length = 669
Score = 40.4 bits (93), Expect = 0.008 Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 20/203 (9%) Frame = +2
Query: 110 SFGGQQGAASVATPYSAQLFPQPSFG---QAFGQQILGSGGKSGGADDFQXXXXXXXXXX 280 S+GGQ AAS Y AQ S+G ++G Q S G A + Sbjct: 317 SYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGS 376
Query: 281 XXNMSGLYGLDSKFPSSGFGSVGAS-----PAAFNQKADQLGA--LGQYSKSQSQFLAAD 439 + YG S S +G+ AS A++N ++ A YS + ++A Sbjct: 377 YGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQP 436
Query: 440 GHSDALKRYSESQLLQSALRQGAALEAGVRSQSEY----------LSGSRSSAITAAGGG 589 + A + Q+ + A Q++ LSGS + AA G Sbjct: 437 ATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATG 496
Query: 590 AYGSGRELLGSTYGVTRSEAEAA 658 +YG+ + YG S AA Sbjct: 497 SYGA-----AAAYGAQPSATLAA 514
>sp|Q96PK6|RBM14_HUMAN RNA-binding protein 14 OS=Homo sapiens GN=RBM14 PE=1 SV=2 Length = 669
Score = 40.4 bits (93), Expect = 0.008 Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 20/203 (9%) Frame = +2
Query: 110 SFGGQQGAASVATPYSAQLFPQPSFG---QAFGQQILGSGGKSGGADDFQXXXXXXXXXX 280 S+GGQ AAS Y AQ S+G ++G Q S G A + Sbjct: 317 SYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGS 376
Query: 281 XXNMSGLYGLDSKFPSSGFGSVGAS-----PAAFNQKADQLGA--LGQYSKSQSQFLAAD 439 + YG S S +G+ AS A++N ++ A YS + ++A Sbjct: 377 YGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQP 436
Query: 440 GHSDALKRYSESQLLQSALRQGAALEAGVRSQSEY----------LSGSRSSAITAAGGG 589 + A + Q+ + A Q++ LSGS + AA G Sbjct: 437 ATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATG 496
Query: 590 AYGSGRELLGSTYGVTRSEAEAA 658 +YG+ + YG S AA Sbjct: 497 SYGA-----AAAYGAQPSATLAA 514
>sp|Q5EA36|RBM14_BOVIN RNA-binding protein 14 OS=Bos taurus GN=RBM14 PE=2 SV=1 Length = 669
Score = 40.4 bits (93), Expect = 0.008 Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 20/203 (9%) Frame = +2
Query: 110 SFGGQQGAASVATPYSAQLFPQPSFG---QAFGQQILGSGGKSGGADDFQXXXXXXXXXX 280 S+GGQ AAS Y AQ S+G ++G Q S G A + Sbjct: 317 SYGGQPAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAANSLGS 376
Query: 281 XXNMSGLYGLDSKFPSSGFGSVGAS-----PAAFNQKADQLGA--LGQYSKSQSQFLAAD 439 + YG S S +G+ AS A++N ++ A YS + ++A Sbjct: 377 YGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQP 436
Query: 440 GHSDALKRYSESQLLQSALRQGAALEAGVRSQSEY----------LSGSRSSAITAAGGG 589 + A + Q+ + A Q++ LSGS + AA G Sbjct: 437 ATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATG 496
Query: 590 AYGSGRELLGSTYGVTRSEAEAA 658 +YG+ + YG S AA Sbjct: 497 SYGA-----AAAYGAQPSATLAA 514
>sp|Q6P0U9|NUPL2_DANRE Nucleoporin-like 2 OS=Danio rerio GN=nupl2 PE=2 SV=1 Length = 414
Score = 38.5 bits (88), Expect = 0.032 Identities = 52/190 (27%), Positives = 70/190 (36%), Gaps = 18/190 (9%) Frame = +2
Query: 137 SVATPYSAQLF--PQPSFGQA---------------FGQQILGSGGKSGGADDFQXXXXX 265 S + P SA F P P FG A FG GSG +S F Sbjct: 197 SSSPPASAPGFGSPGPGFGSATSGFGNTSLSSPPAGFGGAGFGSGPQSSSTFSFAQSKTD 256
Query: 266 XXXXXXXNMSGLYGLDSKFPSSGFGSVGASPAAFNQKADQLGALGQYSKSQSQFLAADGH 445 SG PSSGFG+ S A+F+ A A + S F +A G Sbjct: 257 FGASNTQQASGFGSSAFAQPSSGFGNPAPSAASFSFAA----ADSESKPSAGGFGSASGF 312
Query: 446 SDALKRYSESQLLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAG-GGAYGSGRELLGS 622 S + QG+ +G S S + GS S +++G G A+GS S Sbjct: 313 S----------FKTATAGQGSGFGSGFGSSSGF--GSSSGFGSSSGFGSAFGSAAPAQSS 360
Query: 623 TYGVTRSEAE 652 ++G T A+ Sbjct: 361 SFGSTGGAAD 370
>sp|Q8C2Q3|RBM14_MOUSE RNA-binding protein 14 OS=Mus musculus GN=Rbm14 PE=1 SV=1 Length = 669
Score = 37.4 bits (85), Expect = 0.071 Identities = 52/210 (24%), Positives = 69/210 (32%), Gaps = 27/210 (12%) Frame = +2
Query: 110 SFGGQQGAASVATPYSAQLFPQPSFG---QAFGQQILGSGGKSGGADDFQXXXXXXXXXX 280 ++GGQ AAS Y AQ S+G ++G Q S G A + Sbjct: 317 TYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGS 376
Query: 281 XXNMSGLYGLDSKFPSSGFGSVGAS--------------PAAFNQKADQLGALGQY---- 406 + YG S S +G+ AS P A Q A Y Sbjct: 377 YGAQAASYGAQSAASSLAYGAQAASYSAQPSASYSAQSAPYAAQQAASYSSQPAAYVAQP 436
Query: 407 -----SKSQSQFLAADGHSDALKRYSESQLLQSALRQ-GAALEAGVRSQSEYLSGSRSSA 568 SQ AA + Y ++Q+ L GA G LSGS + Sbjct: 437 ATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASIG-------LSGSYGAQ 489
Query: 569 ITAAGGGAYGSGRELLGSTYGVTRSEAEAA 658 AA G+YG+ + YG S AA Sbjct: 490 SAAAATGSYGA-----AAAYGAQPSATLAA 514
>sp|A2A699|F1712_MOUSE Protein FAM171A2 OS=Mus musculus GN=Fam171a2 PE=2 SV=1 Length = 822
Score = 36.6 bits (83), Expect = 0.12 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 11/148 (7%) Frame = +2
Query: 116 GGQQGAASV---ATPYS------AQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXX 268 GG+ GAA V ATP A+ FPQP + Q G+GG SGG + + Sbjct: 549 GGEAGAAGVGDEATPPEGSAAGPARPFPQPDPQRPLMQGHAGAGGDSGGGEGW------- 601
Query: 269 XXXXXXNMSGLYGLDSKFPSSGFGSVGASPAAFNQKADQLGALGQYSKSQSQFLAADGHS 448 +SG + F S + A +K +L LG ++ F++ DG S Sbjct: 602 GGGRSAPVSGSVTIPVLFNESTMAQLNGELQALTEK--KLLELGVKPHPRAWFVSLDGRS 659
Query: 449 DALKRYS--ESQLLQSALRQGAALEAGV 526 ++ R+S + Q A+L++GV Sbjct: 660 NSQVRHSYIDLQAGSGGRSTDASLDSGV 687
>sp|O76743|GLH4_CAEEL ATP-dependent RNA helicase glh-4 OS=Caenorhabditis elegans GN=glh-4 PE=1 SV=2 Length = 1156
Score = 36.2 bits (82), Expect = 0.16 Identities = 48/184 (26%), Positives = 68/184 (36%), Gaps = 14/184 (7%) Frame = +2
Query: 95 GYPPGSFGGQQGAASVAT--PYSAQLFPQPSFG----QAFGQQI-LGSGGKSGGADDFQX 253 G FGGQ+ A+ ++ P QP FG FG + G GG GA + Sbjct: 229 GSSSSGFGGQKAGATESSGFPTKETSTSQPGFGGDSSTGFGSGLKAGFGGHGAGAAE--- 285
Query: 254 XXXXXXXXXXXNMSGL----YGLDSKFPSSGFGSVGASPAAFNQKADQLGAL---GQYSK 412 SGL G K PS+GFG+ ++ +AF Q++ G G Sbjct: 286 ------------NSGLPTETTGFGGKLPSAGFGASSSNESAFGQQSKGFGGATKNGFGGD 333
Query: 413 SQSQFLAADGHSDALKRYSESQLLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAGGGA 592 S S F G S S + + GA +G ++ T+ GG Sbjct: 334 SSSSF--GSGSKAGFGGTSSSGI--GGQKPGATESSGFPTKE-----------TSTSGGT 378
Query: 593 YGSG 604 +GSG Sbjct: 379 FGSG 382
>sp|Q86YZ3|HORN_HUMAN Hornerin OS=Homo sapiens GN=HRNR PE=1 SV=2 Length = 2850
Score = 34.3 bits (77), Expect = 0.60 Identities = 46/179 (25%), Positives = 65/179 (36%) Frame = +2
Query: 95 GYPPGSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXXXX 274 G S GQQG+ S +P + ++GQ GSG S Sbjct: 2282 GSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSS-------------- 2327
Query: 275 XXXXNMSGLYGLDSKFPSSGFGSVGASPAAFNQKADQLGALGQYSKSQSQFLAADGHSDA 454 SG +G S SSGFG +S + Q G+ +S S Q + G S Sbjct: 2328 ------SGRHGSGSG-QSSGFGHHESSSWQ-SSGYTQHGSGSGHSSSYEQHGSRSGQSSR 2379
Query: 455 LKRYSESQLLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAGGGAYGSGRELLGSTYG 631 +R+ S S+ Q + ++ SGS S + G GSG+ S YG Sbjct: 2380 GERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYG 2438
Score = 32.3 bits (72), Expect = 2.3 Identities = 43/171 (25%), Positives = 62/171 (36%) Frame = +2
Query: 119 GQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXXXXXXXXNMSG 298 G+ GA S +P + ++GQ GSG S SG Sbjct: 1350 GRHGAGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSS--------------------SG 1389
Query: 299 LYGLDSKFPSSGFGSVGASPAAFNQKADQLGALGQYSKSQSQFLAADGHSDALKRYSESQ 478 +G S SSGFG +S + Q G+ +S S Q + G S +R+ S Sbjct: 1390 RHGSGSG-QSSGFGHHESSSWQ-SSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSS 1447
Query: 479 LLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAGGGAYGSGRELLGSTYG 631 S+ Q + ++ SGS S + G GSG+ S YG Sbjct: 1448 GSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYG 1498
Score = 32.0 bits (71), Expect = 3.0 Identities = 44/167 (26%), Positives = 60/167 (35%), Gaps = 5/167 (2%) Frame = +2
Query: 119 GQQGAASVATPYSAQLFPQPSFGQAFGQQILGSG---GKSGGADDFQXXXXXXXXXXXXN 289 GQ GA S + Q S +GQQ GSG + DF + Sbjct: 624 GQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDF----------GHSS 673
Query: 290 MSGLYGLDSKFPSSG--FGSVGASPAAFNQKADQLGALGQYSKSQSQFLAADGHSDALKR 463 G +G S + SS GSV + F K+ GQ S SQ + HS ++ Sbjct: 674 SYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGS----GQ-SSGYSQHGSGSSHSSGYRK 728
Query: 464 YSESQLLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAGGGAYGSG 604 + S Q + S ++ SGS S +G G GSG Sbjct: 729 HGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQS----SGHGRQGSG 771
Score = 31.2 bits (69), Expect = 5.1 Identities = 44/179 (24%), Positives = 64/179 (35%) Frame = +2
Query: 95 GYPPGSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXXXX 274 G S GQQG+ S +P + ++GQ GSG S Sbjct: 1812 GSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSS-------------- 1857
Query: 275 XXXXNMSGLYGLDSKFPSSGFGSVGASPAAFNQKADQLGALGQYSKSQSQFLAADGHSDA 454 SG +G S SSGFG +S + Q G+ +S S Q + G S Sbjct: 1858 ------SGRHGSGSG-QSSGFGHHESSSWQ-SSGYTQHGSGSGHSSSYEQHGSRSGQSSR 1909
Query: 455 LKRYSESQLLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAGGGAYGSGRELLGSTYG 631 +++ S S+ Q + ++ SGS S + G GSG+ YG Sbjct: 1910 GEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYG 1968
Score = 30.8 bits (68), Expect = 6.7 Identities = 46/194 (23%), Positives = 71/194 (36%), Gaps = 15/194 (7%) Frame = +2
Query: 107 GSFGGQQGAASVATPYSAQLFPQPSFGQ-------AFGQ--------QILGSGGKSGGAD 241 G G G +S + + + S+GQ A G+ Q G G + G+ Sbjct: 842 GRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSG 901
Query: 242 DFQXXXXXXXXXXXXNMSGLYGLDSKFPSSGFGSVGASPAAFNQKADQLGALGQYSKSQS 421 + SG +G S SSGFG +S + Q G+ +S S Sbjct: 902 QSPSYGRHGSGSGRSSSSGRHGSGSG-QSSGFGHKSSSGQSSGYT--QHGSGSGHSSSYE 958
Query: 422 QFLAADGHSDALKRYSESQLLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAGGGAYGS 601 Q + G S +++ S S+ Q + ++ SGS S + G GS Sbjct: 959 QHGSRSGQSSRSEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGS 1018
Query: 602 GRELLGSTYGVTRS 643 G+ S+YG RS Sbjct: 1019 GQ---SSSYGPYRS 1029
>sp|P53992|SC24C_HUMAN Protein transport protein Sec24C OS=Homo sapiens GN=SEC24C PE=1 SV=2 Length = 1094
Score = 32.7 bits (73), Expect = 1.8 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +2
Query: 95 GYPPGSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSG 232 GY S+GGQ G+ + A PY A P P + Q Q + + SG Sbjct: 22 GYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSG 67
>sp|P56959|FUS_MOUSE RNA-binding protein FUS OS=Mus musculus GN=Fus PE=2 SV=1 Length = 518
Score = 32.3 bits (72), Expect = 2.3 Identities = 41/183 (22%), Positives = 61/183 (33%), Gaps = 19/183 (10%) Frame = +2
Query: 119 GQQGAASVATPYSAQLFPQPSFGQAFGQ-QILGSGGKSGGADDFQXXXXXXXXXXXXNMS 295 GQQ + + Q S+G ++GQ Q G G +S Q + Sbjct: 34 GQQSYSGYGQSADTSGYGQSSYGSSYGQTQNTGYGTQSAP----QGYGSTGGYGSSQSSQ 89
Query: 296 GLYGLDSKFP--------SSGFGSVGASPAAFNQKADQLGALGQ---YSKSQSQFLAADG 442 YG S +P SS GS G S + + Q G GQ Y Q + Sbjct: 90 SSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQS 149
Query: 443 HSDALKRYSESQLLQSALRQGAALEAGVRSQSEYL-------SGSRSSAITAAGGGAYGS 601 + + Y + S+ G G Q + G + + GGG YG Sbjct: 150 SYNPPQGYGQQNQYNSSSGGGGGGGGGNYGQDQSSMSGGGGGGGYGNQDQSGGGGGGYGG 209
Query: 602 GRE 610 G++ Sbjct: 210 GQQ 212
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q29GM3 |
Definition |
tr|Q29GM3|Q29GM3_DROPS GA17069 OS=Drosophila pseudoobscura pseudoobscura |
Align length |
114 |
Score (bit) |
43.1 |
E-value |
0.015 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950785|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_J23, 5' (662 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q29GM3|Q29GM3_DROPS GA17069 OS=Drosophila pseudoobscura pseud... 43 0.015 tr|A4RMV3|A4RMV3_MAGGR Putative uncharacterized protein OS=Magna... 42 0.026 tr|Q14UU4|Q14UU4_YPOEV Heavy-chain filboin (Fragment) OS=Yponome... 41 0.075 tr|Q92UU8|Q92UU8_RHIME Putative uncharacterized protein OS=Rhizo... 40 0.098 tr|Q9NFX7|Q9NFX7_CERCA Chorion protein s18 OS=Ceratitis capitata... 40 0.098 tr|Q9BIU0|Q9BIU0_9ARAC Major ampullate spidroin 1 (Fragment) OS=... 40 0.098 tr|O62009|O62009_CERCA S18 chorion protein OS=Ceratitis capitata... 40 0.098 tr|A8IM86|A8IM86_OECSM Silk fibroin OS=Oecophylla smaragdina GN=... 40 0.098 tr|Q59GV2|Q59GV2_HUMAN RNA binding motif protein 14 variant (Fra... 40 0.098 tr|B3KMN4|B3KMN4_HUMAN cDNA FLJ11706 fis, clone HEMBA1005101, hi... 40 0.098 tr|A4I2M5|A4I2M5_LEIIN Nucleoporin, putative (Serine peptidase, ... 40 0.17 tr|A2R1W4|A2R1W4_ASPNC Differential expressed Arsa-7 from patent... 39 0.22 tr|A8IAZ7|A8IAZ7_CHLRE Predicted protein (Fragment) OS=Chlamydom... 39 0.29 tr|Q9BIU6|Q9BIU6_ARGTR Major ampullate spidroin 2 (Fragment) OS=... 39 0.29 tr|Q4FYT4|Q4FYT4_LEIMA Serine peptidase, Clan SP, family S59, pu... 39 0.29 tr|B3N560|B3N560_DROER GG23660 OS=Drosophila erecta GN=GG23660 P... 39 0.29 tr|Q920B2|Q920B2_RAT Coactivator activator (Fragment) OS=Rattus ... 39 0.37 tr|A8ITB3|A8ITB3_CHLRE Predicted protein OS=Chlamydomonas reinha... 39 0.37 tr|Q2VLH3|Q2VLH3_9ARAC Major ampullate spidroin 1-like (Fragment... 38 0.49 tr|B6K930|B6K930_TOXGO Nucleoporin FG repeat-containing protein ... 38 0.64 tr|A0AMH1|A0AMH1_SARSC Putative uncharacterized protein (Fragmen... 38 0.64 tr|Q6C7Y4|Q6C7Y4_YARLI YALI0D24365p OS=Yarrowia lipolytica GN=YA... 38 0.64 tr|Q8CGF4|Q8CGF4_MOUSE Sec24 related gene family, member C (S. c... 37 0.83 tr|Q80U83|Q80U83_MOUSE MKIAA0079 protein (Fragment) OS=Mus muscu... 37 0.83 tr|Q3U6A2|Q3U6A2_MOUSE Putative uncharacterized protein OS=Mus m... 37 0.83 tr|B4NPH1|B4NPH1_DROWI GK15212 OS=Drosophila willistoni GN=GK152... 37 0.83 tr|A9V5A9|A9V5A9_MONBE Predicted protein OS=Monosiga brevicollis... 37 0.83 tr|A9RU62|A9RU62_PHYPA Predicted protein OS=Physcomitrella paten... 37 1.1 tr|Q25C18|Q25C18_ARGBR Egg case silk protein 1 OS=Argiope bruenn... 37 1.1 tr|B4MWP5|B4MWP5_DROWI GK15511 OS=Drosophila willistoni GN=GK155... 37 1.1
>tr|Q29GM3|Q29GM3_DROPS GA17069 OS=Drosophila pseudoobscura pseudoobscura GN=GA17069 PE=4 SV=2 Length = 282
Score = 43.1 bits (100), Expect = 0.015 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 8/114 (7%) Frame = +2
Query: 287 NMSGLYGLDSKFPSSGFGSVGASPAAFNQKA---DQLGALGQYSKSQSQ--FLAADGHSD 451 N+S + L K S + G AA + A Q L Q+ SQS +++A H Sbjct: 36 NISNIVKLREKVASDSAAANGGHQAAQTRAALVEQQYSTLQQHQLSQSDLNYISASTHPK 95
Query: 452 ALKRYSESQLLQSALRQGA---ALEAGVRSQSEYLSGSRSSAITAAGGGAYGSG 604 L+R + QL Q +Q A +E G+RS ++ SG +S + G GSG Sbjct: 96 NLQRPLQQQLPQQQQQQKANKIVIEIGLRSANDSASGKAASGSASGSGSGSGSG 149
>tr|A4RMV3|A4RMV3_MAGGR Putative uncharacterized protein OS=Magnaporthe grisea GN=MGG_04528 PE=4 SV=1 Length = 1625
Score = 42.4 bits (98), Expect = 0.026 Identities = 52/195 (26%), Positives = 70/195 (35%), Gaps = 9/195 (4%) Frame = +2
Query: 101 PPGSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDF-QXXXXXXXXX 277 P SFGG + +P+ + PS AFG+ GS G G F Sbjct: 492 PGPSFGGSSALGAKPSPWGSSSAATPSAAPAFGKTAFGSAGGDSGKSAFGSPAFGSTSAL 551
Query: 278 XXXNMSGLYGLDSKFPSS----GFGSVGA-SPAAFNQKADQLGALGQYSKSQSQFLAADG 442 + + +G S SS FGS A+ + Q ALG ++S A G Sbjct: 552 GSSSTTSAFGSTSTLGSSSATPAFGSTSTLGGASVSPAFGQSSALGGGMGAKSSPWATGG 611
Query: 443 HSDALKRYSESQLLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAGGG---AYGSGREL 613 S A + ++ L S G G + S SGS SA GG A G G Sbjct: 612 TSAATPAFGQTG-LGSTPSGGTGKIFGGGASSTPASGSGFSAFANKGGFGSLASGGGDNN 670
Query: 614 LGSTYGVTRSEAEAA 658 GS +G + A Sbjct: 671 SGSIFGAGKPSGSFA 685
>tr|Q14UU4|Q14UU4_YPOEV Heavy-chain filboin (Fragment) OS=Yponomeuta evonymella GN=Fib-H PE=2 SV=1 Length = 647
Score = 40.8 bits (94), Expect = 0.075 Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 7/173 (4%) Frame = +2
Query: 107 GSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXXXXXXXX 286 GS G A++ A + L G G S + G++D Sbjct: 462 GSGSGAAAASAAAAGGNGPLVLNNYGGYGSGSGAAASSASAAGSND----------ELVV 511
Query: 287 NMSGLYGLDSKFPSSGFGSVGAS-PAAFNQKADQLGALGQYSKSQSQFLAADGHSDAL-- 457 N G YG S +S + G+S P N ++LG LG S + + +A G S + Sbjct: 512 NNYGGYGSGSGAAASSAAAAGSSAPVVIN---NELGGLGSGSGAAASSASAAGASSPVII 568
Query: 458 -KRYSESQLLQSALRQGAALEAG---VRSQSEYLSGSRSSAITAAGGGAYGSG 604 Y +A AA +G V + Y SGS ++A +A G YGSG Sbjct: 569 NNEYGPRGSGSAAASSAAAGSSGPVFVNNYGPYGSGSSAAASASASAGGYGSG 621
Score = 35.4 bits (80), Expect = 3.2 Identities = 59/204 (28%), Positives = 73/204 (35%), Gaps = 16/204 (7%) Frame = +2
Query: 95 GYPPGSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXXXX 274 GY G +G GA S A+ A +G G GSG GA Sbjct: 285 GYGAGGYGSGSGAGSSASAGGAG-----GYGSNGGAGGYGSGS---GAAAASAAAAGGNG 336
Query: 275 XXXXNMSGLYGLDSKFPSSGFGSVGASPAAFNQK--ADQLGALGQYSKSQSQFLAADGHS 448 N G YG SG + AS A N + + G G S + + AA G S Sbjct: 337 PLVLNNYGGYG-----SGSGAAASSASAAGSNDELVVNNYGGYGSGSGAAASSAAAAGSS 391
Query: 449 DALKRYSE-------SQLLQSALRQGAALEAGVR----SQSEYLSGSRSSAITAAGG-GA 592 + +E S SA G A G Y SGS + + T+AGG G Sbjct: 392 GPVVINNEYGPYGAGSSAAASAAAAGGAGGNGYGLNGYGAGGYGSGSGAGSSTSAGGAGG 451
Query: 593 YGS--GRELLGSTYGVTRSEAEAA 658 YGS G GS G + A AA Sbjct: 452 YGSNGGAGGYGSGSGAAAASAAAA 475
Score = 35.0 bits (79), Expect = 4.1 Identities = 51/192 (26%), Positives = 66/192 (34%), Gaps = 4/192 (2%) Frame = +2
Query: 95 GYPPGSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXXXX 274 GY G +G GA S A+ A +G G GSG GA Sbjct: 170 GYGAGGYGSGSGAGSSASAGGAG-----GYGSNGGAGGYGSGS---GAAAASAAAAGGNG 221
Query: 275 XXXXNMSGLYGLDSKFPSSGFGSVGAS-PAAFNQKADQLGALGQYSKSQSQFLAADGHSD 451 N G YG S +S + G+S P N + GA + S + A G+ + Sbjct: 222 PLVLNNYGGYGSGSGAAASSAAAAGSSGPVVVNNEFGPYGAGSSAAASAAAAGGAGGNGN 281
Query: 452 ALKRYSESQLLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAGG-GAYGS--GRELLGS 622 L Y Y SGS + + +AGG G YGS G GS Sbjct: 282 GLNGYGAGG---------------------YGSGSGAGSSASAGGAGGYGSNGGAGGYGS 320
Query: 623 TYGVTRSEAEAA 658 G + A AA Sbjct: 321 GSGAAAASAAAA 332
>tr|Q92UU8|Q92UU8_RHIME Putative uncharacterized protein OS=Rhizobium meliloti GN=RB0989 PE=4 SV=1 Length = 2174
Score = 40.4 bits (93), Expect = 0.098 Identities = 42/166 (25%), Positives = 62/166 (37%) Frame = +2
Query: 107 GSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXXXXXXXX 286 GS GG GA + A SA + + A Q +G GG +GG Sbjct: 943 GSAGGNGGAVTAALKDSASVTTADDYANAIVVQSIGGGGGNGGVGSVNSKEIGSGFNLTA 1002
Query: 287 NMSGLYGLDSKFPSSGFGSVGASPAAFNQKADQLGALGQYSKSQSQFLAADGHSDALKRY 466 N+ G+ G S S G VG Q + S ++ + + G + Sbjct: 1003 NV-GVGGSGSGGASGGNAIVGLDSGTHLQTSG--------SGARGVIVQSIGGGGGTSQG 1053
Query: 467 SESQLLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAGGGAYGSG 604 + L SA G EA +SE SG+ S+++ + G GSG Sbjct: 1054 ASVGLSASASLPGGGEEAAEAEESEEGSGAFSASVGVSVGRTGGSG 1099
>tr|Q9NFX7|Q9NFX7_CERCA Chorion protein s18 OS=Ceratitis capitata GN=s18 PE=3 SV=1 Length = 332
Score = 40.4 bits (93), Expect = 0.098 Identities = 43/171 (25%), Positives = 62/171 (36%), Gaps = 6/171 (3%) Frame = +2
Query: 107 GSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXXXXXXXX 286 G +GG+ G+ +V + Q+ P Q I +GG S G Sbjct: 24 GGYGGRGGSGTVIGGQAYQILPALQV-----QTIAAAGGSSAG----------------- 61
Query: 287 NMSGLYGLDSKFPSSGFGSVGASPAAFNQKADQLGALGQYSKSQSQFLAADGHSDALKRY 466 YG S + GS GAS + ++ GA S Q LAA G L Sbjct: 62 -----YGGSSAGYGASSGSYGASSGGYGGSSNGYGASSAPSIDIGQLLAAVGGD--LTAQ 114
Query: 467 SESQLLQSALRQGAAL------EAGVRSQSEYLSGSRSSAITAAGGGAYGS 601 +QL+ S G + AG Q Y SG + + +GG +Y + Sbjct: 115 EAAQLVNSLPSAGGPIIDTSGSSAGSSHQGSYPSGGNLAYVIQSGGSSYSA 165
>tr|Q9BIU0|Q9BIU0_9ARAC Major ampullate spidroin 1 (Fragment) OS=Latrodectus geometricus GN=MaSp1 PE=2 SV=1 Length = 360
Score = 40.4 bits (93), Expect = 0.098 Identities = 51/184 (27%), Positives = 63/184 (34%) Frame = +2
Query: 107 GSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXXXXXXXX 286 G G QGAA+ A + Q +GQ +GQ G GG A Sbjct: 74 GRGGAGQGAAAAAAAAGSGQGGQGGYGQGYGQGGAGQGGAGAAA---------AAAAAGG 124
Query: 287 NMSGLYGLDSKFPSSGFGSVGASPAAFNQKADQLGALGQYSKSQSQFLAADGHSDALKRY 466 G YG G G GA+ AA G G Y + Q A G + A Sbjct: 125 AGQGGYG------RGGAGQGGAAAAAAAAGGAGQGGQGGYGQGYGQGGAGQGGAGA---- 174
Query: 467 SESQLLQSALRQGAALEAGVRSQSEYLSGSRSSAITAAGGGAYGSGRELLGSTYGVTRSE 646 +A G A + G GS ++A A G G G GR G+ G S Sbjct: 175 -----AAAAAAAGGAGQGGYGRGGAGQGGSAAAAAAAGGAGQGGYGRG--GAGQGGAGSA 227
Query: 647 AEAA 658 A AA Sbjct: 228 AAAA 231
>tr|O62009|O62009_CERCA S18 chorion protein OS=Ceratitis capitata GN=s18 chorion gene PE=2 SV=1 Length = 332
Score = 40.4 bits (93), Expect = 0.098 Identities = 43/171 (25%), Positives = 62/171 (36%), Gaps = 6/171 (3%) Frame = +2
Query: 107 GSFGGQQGAASVATPYSAQLFPQPSFGQAFGQQILGSGGKSGGADDFQXXXXXXXXXXXX 286 G +GG+ G+ +V + Q+ P Q I +GG S G Sbjct: 24 GGYGGRGGSGTVIGGQAYQILPALQV-----QTIAAAGGSSAG----------------- 61
Query: 287 NMSGLYGLDSKFPSSGFGSVGASPAAFNQKADQLGALGQYSKSQSQFLAADGHSDALKRY 466 YG S + GS GAS + ++ GA S Q LAA G L Sbjct: 62 -----YGGSSAGYGASSGSYGASSGGYGGSSNGYGASSAPSIDIGQLLAAVGGD--LTAQ 114
Query: 467 SESQLLQSALRQGAAL------EAGVRSQSEYLSGSRSSAITAAGGGAYGS 601 +QL+ S G + AG Q Y SG + + +GG +Y + Sbjct: 115 EAAQLVNSLPSAGGPIIDTSGSSAGSSHQGSYPSGGNLAYVIQSGGSSYSA 165
>tr|A8IM86|A8IM86_OECSM Silk fibroin OS=Oecophylla smaragdina GN=F2_WA PE=2 SV=1 Length = 400
Score = 40.4 bits (93), Expect = 0.098 Identities = 31/106 (29%), Positives = 48/106 (45%) Frame = +2
Query: 341 SVGASPAAFNQKADQLGALGQYSKSQSQFLAADGHSDALKRYSESQLLQSALRQGAALEA 520 S S A+ +A+ + A A +++ KR S +L++ A+ A Sbjct: 288 SAAESAASAQSEANTIAAEAVARADAEAASQAQAWAESFKRELSSVVLEAEANASASASA 347
Query: 521 GVRSQSEYLSGSRSSAITAAGGGAYGSGRELLGSTYGVTRSEAEAA 658 G + SG+ SSA +AG +YGS L G +G + SEA AA Sbjct: 348 GALASGSSSSGASSSADASAGASSYGS---LGGYRHGGSFSEASAA 390
>tr|Q59GV2|Q59GV2_HUMAN RNA binding motif protein 14 variant (Fragment) OS=Homo sapiens PE=2 SV=1 Length = 552
Score = 40.4 bits (93), Expect = 0.098 Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 20/203 (9%) Frame = +2
Query: 110 SFGGQQGAASVATPYSAQLFPQPSFG---QAFGQQILGSGGKSGGADDFQXXXXXXXXXX 280 S+GGQ AAS Y AQ S+G ++G Q S G A + Sbjct: 251 SYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGS 310
Query: 281 XXNMSGLYGLDSKFPSSGFGSVGAS-----PAAFNQKADQLGA--LGQYSKSQSQFLAAD 439 + YG S S +G+ AS A++N ++ A YS + ++A Sbjct: 311 YGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQP 370
Query: 440 GHSDALKRYSESQLLQSALRQGAALEAGVRSQSEY----------LSGSRSSAITAAGGG 589 + A + Q+ + A Q++ LSGS + AA G Sbjct: 371 ATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATG 430
Query: 590 AYGSGRELLGSTYGVTRSEAEAA 658 +YG+ + YG S AA Sbjct: 431 SYGA-----AAAYGAQPSATLAA 448
>tr|B3KMN4|B3KMN4_HUMAN cDNA FLJ11706 fis, clone HEMBA1005101, highly similar to RNA-binding protein 14 OS=Homo sapiens GN=RBM14 PE=2 SV=1 Length = 669
Score = 40.4 bits (93), Expect = 0.098 Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 20/203 (9%) Frame = +2
Query: 110 SFGGQQGAASVATPYSAQLFPQPSFG---QAFGQQILGSGGKSGGADDFQXXXXXXXXXX 280 S+GGQ AAS Y AQ S+G ++G Q S G A + Sbjct: 317 SYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGS 376
Query: 281 XXNMSGLYGLDSKFPSSGFGSVGAS-----PAAFNQKADQLGA--LGQYSKSQSQFLAAD 439 + YG S S +G+ AS A++N ++ A YS + ++A Sbjct: 377 YGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQP 436
Query: 440 GHSDALKRYSESQLLQSALRQGAALEAGVRSQSEY----------LSGSRSSAITAAGGG 589 + A + Q+ + A Q++ LSGS + AA G Sbjct: 437 ATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATG 496
Query: 590 AYGSGRELLGSTYGVTRSEAEAA 658 +YG+ + YG S AA Sbjct: 497 SYGA-----AAAYGAQPSATLAA 514
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