DK950797 |
Clone id |
TST38A01NGRL0009_K13 |
Library |
TST38 |
Length |
670 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_K13. 5' end sequence. |
Accession |
DK950797 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
CATCATCAAACGCATCCGCTTCGTGGGTTCCCGAGCTCAAGGGTACATTCACAGATGCTA ATCAAAGGACACAATTCAAAGGCCTACAAGATGGTATCAATGTGCACAGAGAGTACGACT ATGATGATGATGACATGGAAGTTAACAGCACACGGAGTTCACATCAAGACAACGAATTGG CATTGGTTGCTCCTGATCTGCATCAAGCACCTCATCAGCATAGTGCTGGCACCACTCTTG AAAATGTTGTCTACCTGCATAATTCGGATTCTGAAGAGAGGGCCAACGTGATGCACATTC ATAACCTATCGCAAGTAGTTGAGACTGTAAAAGAGCAAAGCACATTTGAGACTACTAGCT CGCAATACTTATACAAGTTCCAAAATGCGGAGGCAAGAGGGAGCCCTTCAAAATCTTGTG CTACTGTTGAGGAGATGGGACGTGTTGCAGTTAGCTCTTATGCAGATTCCACTCTACGAG TCCGGAAGAGGATCAAGGCTTATTTTCGCCAGAATGGAGCATCTCATGTACGCGAGTTGC CTGCGAAGGAATTTTGCCAAAGAGGTTTTGTTTTTGGAAGAGCTGCAGAGGATGGTTTAG GGAATGATATATACAAGATACTTACTGCAGCTGGACTAAGCATCATGCTGAACCGTTCTC TGATTGTTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P87061 |
Definition |
sp|P87061|TEA1_SCHPO Tip elongation aberrant protein 1 OS=Schizosaccharomyces pombe |
Align length |
82 |
Score (bit) |
35.4 |
E-value |
0.28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SXG2 |
Definition |
tr|A9SXG2|A9SXG2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
125 |
Score (bit) |
111.0 |
E-value |
5.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950797|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_K13, 5' (670 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SXG2|A9SXG2_PHYPA Predicted protein OS=Physcomitrella paten... 111 5e-23 tr|Q9LSE0|Q9LSE0_ARATH Genomic DNA, chromosome 3, P1 clone: MOJ1... 104 4e-21 tr|Q6NQ93|Q6NQ93_ARATH At3g26950 (Putative uncharacterized prote... 104 4e-21 tr|Q56YF0|Q56YF0_ARATH Putative uncharacterized protein At3g2695... 104 4e-21 tr|A5AMX6|A5AMX6_VITVI Putative uncharacterized protein OS=Vitis... 103 7e-21 tr|Q2R3Q7|Q2R3Q7_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 101 5e-20 tr|A3CBL7|A3CBL7_ORYSJ Putative uncharacterized protein OS=Oryza... 97 9e-19 tr|A9RU01|A9RU01_PHYPA Predicted protein OS=Physcomitrella paten... 87 9e-16 tr|A7P9Y9|A7P9Y9_VITVI Chromosome chr14 scaffold_9, whole genome... 80 1e-13 tr|A5AIV1|A5AIV1_VITVI Putative uncharacterized protein OS=Vitis... 68 5e-10 tr|B8BKN7|B8BKN7_ORYSI Putative uncharacterized protein OS=Oryza... 65 4e-09 tr|A7PHL7|A7PHL7_VITVI Chromosome chr17 scaffold_16, whole genom... 60 9e-08 tr|Q3A046|Q3A046_PELCD ABC-type transport system, periplasmic co... 38 0.50 tr|Q54H52|Q54H52_DICDI WD40-like domain-containing protein OS=Di... 38 0.65 tr|B4K5U2|B4K5U2_DROMO GI24660 OS=Drosophila mojavensis GN=GI246... 38 0.65 tr|Q9M9S7|Q9M9S7_ARATH F14L17.12 protein OS=Arabidopsis thaliana... 37 1.5 tr|Q94FL6|Q94FL6_ARATH Putative transcription factor MYB124 (At1... 37 1.5 tr|A3IAW3|A3IAW3_9BACI Glycosyl transferase and polysaccharide d... 36 2.5 tr|A2CHH9|A2CHH9_9MOLU DNA-directed RNA polymerase (Fragment) OS... 35 3.2 tr|Q2V4A9|Q2V4A9_ARATH Uncharacterized protein At2g02820.2 OS=Ar... 35 3.2 tr|Q90YB0|Q90YB0_CHICK FEN-1 nuclease OS=Gallus gallus GN=FEN1 P... 35 4.2 tr|Q5ZLN4|Q5ZLN4_CHICK Putative uncharacterized protein OS=Gallu... 35 4.2 tr|B4MST6|B4MST6_DROWI GK20032 OS=Drosophila willistoni GN=GK200... 35 4.2 tr|A8NXX9|A8NXX9_BRUMA Viral A-type inclusion protein repeat con... 35 5.5 tr|B4F742|B4F742_XENTR Putative uncharacterized protein OS=Xenop... 34 7.2 tr|Q8CS00|Q8CS00_STAES Putative uncharacterized protein OS=Staph... 34 7.2 tr|A0RJW7|A0RJW7_BACAH Spore germination protein GerHA OS=Bacill... 34 7.2 tr|B5HX89|B5HX89_9ACTO Transcriptional regulator OS=Streptomyces... 34 7.2 tr|Q8I551|Q8I551_PLAF7 Putative uncharacterized protein OS=Plasm... 34 7.2 tr|Q86K34|Q86K34_DICDI Putative uncharacterized protein OS=Dicty... 34 7.2
>tr|A9SXG2|A9SXG2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_136858 PE=4 SV=1 Length = 546
Score = 111 bits (277), Expect = 5e-23 Identities = 56/125 (44%), Positives = 82/125 (65%), Gaps = 1/125 (0%) Frame = +3
Query: 297 IHNLSQVVETVKEQSTFETTSSQYLYKFQNAEARG-SPSKSCATVEEMGRVAVSSYADST 473 ++ +++ + V+ + T T +S + A + +P K CAT EEMG V S+ Sbjct: 6 LNQVTEASKAVELRETSTTPASDNDWNIPRAVPKNWTPPKKCATAEEMGAETVGETRASS 65
Query: 474 LRVRKRIKAYFRQNGASHVRELPAKEFCQRGFVFGRAAEDGLGNDIYKILTAAGLSIMLN 653 LRVR I+ + ++GA VR+LP EFC+RGFV G+A EDG GN++YK+LTAAGL++MLN Sbjct: 66 LRVRAMIREFIAEHGAERVRKLPGGEFCRRGFVLGQALEDGFGNNMYKVLTAAGLAVMLN 125
Query: 654 RSLIV 668 RSLI+ Sbjct: 126 RSLII 130
>tr|Q9LSE0|Q9LSE0_ARATH Genomic DNA, chromosome 3, P1 clone: MOJ10 OS=Arabidopsis thaliana PE=4 SV=1 Length = 522
Score = 104 bits (260), Expect = 4e-21 Identities = 52/93 (55%), Positives = 67/93 (72%) Frame = +3
Query: 390 EARGSPSKSCATVEEMGRVAVSSYADSTLRVRKRIKAYFRQNGASHVRELPAKEFCQRGF 569 EA +K CATVEEMG + D +LRVR I +F+ NGAS +RELP ++FC+ G+ Sbjct: 67 EAMVDGAKLCATVEEMGSEFDGGFVDQSLRVRDVIHRHFQINGASAIRELPPEQFCRHGY 126
Query: 570 VFGRAAEDGLGNDIYKILTAAGLSIMLNRSLIV 668 V G+ AE G GN++YKILT+A LSIMLNRSLI+ Sbjct: 127 VLGKTAEAGFGNEMYKILTSAALSIMLNRSLII 159
>tr|Q6NQ93|Q6NQ93_ARATH At3g26950 (Putative uncharacterized protein At3g26950) OS=Arabidopsis thaliana GN=At3g26950 PE=2 SV=1 Length = 548
Score = 104 bits (260), Expect = 4e-21 Identities = 52/93 (55%), Positives = 67/93 (72%) Frame = +3
Query: 390 EARGSPSKSCATVEEMGRVAVSSYADSTLRVRKRIKAYFRQNGASHVRELPAKEFCQRGF 569 EA +K CATVEEMG + D +LRVR I +F+ NGAS +RELP ++FC+ G+ Sbjct: 67 EAMVDGAKLCATVEEMGSEFDGGFVDQSLRVRDVIHRHFQINGASAIRELPPEQFCRHGY 126
Query: 570 VFGRAAEDGLGNDIYKILTAAGLSIMLNRSLIV 668 V G+ AE G GN++YKILT+A LSIMLNRSLI+ Sbjct: 127 VLGKTAEAGFGNEMYKILTSAALSIMLNRSLII 159
>tr|Q56YF0|Q56YF0_ARATH Putative uncharacterized protein At3g26950 OS=Arabidopsis thaliana GN=At3g26950 PE=2 SV=1 Length = 548
Score = 104 bits (260), Expect = 4e-21 Identities = 52/93 (55%), Positives = 67/93 (72%) Frame = +3
Query: 390 EARGSPSKSCATVEEMGRVAVSSYADSTLRVRKRIKAYFRQNGASHVRELPAKEFCQRGF 569 EA +K CATVEEMG + D +LRVR I +F+ NGAS +RELP ++FC+ G+ Sbjct: 67 EAMVDGAKLCATVEEMGSEFDGGFVDQSLRVRDVIHRHFQINGASAIRELPPEQFCRHGY 126
Query: 570 VFGRAAEDGLGNDIYKILTAAGLSIMLNRSLIV 668 V G+ AE G GN++YKILT+A LSIMLNRSLI+ Sbjct: 127 VLGKTAEAGFGNEMYKILTSAALSIMLNRSLII 159
>tr|A5AMX6|A5AMX6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038616 PE=4 SV=1 Length = 969
Score = 103 bits (258), Expect = 7e-21 Identities = 50/86 (58%), Positives = 62/86 (72%) Frame = +3
Query: 399 GSPSKSCATVEEMGRVAVSSYADSTLRVRKRIKAYFRQNGASHVRELPAKEFCQRGFVFG 578 GS K CATVEEMG + V + + LRVR+ I+ +F +GAS VR+LP FC GFV G Sbjct: 24 GSDIKGCATVEEMGEIFVGGFREENLRVRRMIQDHFALHGASRVRDLPPVHFCSHGFVLG 83
Query: 579 RAAEDGLGNDIYKILTAAGLSIMLNR 656 +A+E G GN++YKILTAA LSIMLNR Sbjct: 84 KASEAGFGNEMYKILTAAALSIMLNR 109
>tr|Q2R3Q7|Q2R3Q7_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os11g0507400 PE=4 SV=2 Length = 569
Score = 101 bits (251), Expect = 5e-20 Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 5/98 (5%) Frame = +3
Query: 390 EARGSPSKS---CATVEEMGRVAVS--SYADSTLRVRKRIKAYFRQNGASHVRELPAKEF 554 EA G S + CATVE MG A S ++LRVR+ I+ +F +GAS VRELPA EF Sbjct: 73 EAGGGASTTGAACATVERMGEEAAGRGSPEAASLRVRELIRRHFLLHGASRVRELPAYEF 132
Query: 555 CQRGFVFGRAAEDGLGNDIYKILTAAGLSIMLNRSLIV 668 C++GFV G+A+E G GN++YKILTAA LS+MLNRSLI+ Sbjct: 133 CKQGFVLGKASEAGFGNEMYKILTAAALSVMLNRSLII 170
>tr|A3CBL7|A3CBL7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032689 PE=4 SV=1 Length = 548
Score = 97.1 bits (240), Expect = 9e-19 Identities = 54/96 (56%), Positives = 68/96 (70%), Gaps = 5/96 (5%) Frame = +3
Query: 390 EARGSPSKS---CATVEEMGRVAVS--SYADSTLRVRKRIKAYFRQNGASHVRELPAKEF 554 EA G S + CATVE MG A S ++LRVR+ I+ +F +GAS VRELPA EF Sbjct: 73 EAGGGASTTGAACATVERMGEEAAGRGSPEAASLRVRELIRRHFLLHGASRVRELPAYEF 132
Query: 555 CQRGFVFGRAAEDGLGNDIYKILTAAGLSIMLNRSL 662 C++GFV G+A+E G GN++YKILTAA LS+MLNR L Sbjct: 133 CKQGFVLGKASEAGFGNEMYKILTAAALSVMLNRGL 168
>tr|A9RU01|A9RU01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_205578 PE=4 SV=1 Length = 489
Score = 87.0 bits (214), Expect = 9e-16 Identities = 41/78 (52%), Positives = 56/78 (71%) Frame = +3
Query: 435 MGRVAVSSYADSTLRVRKRIKAYFRQNGASHVRELPAKEFCQRGFVFGRAAEDGLGNDIY 614 MG VAV ++LR+R IK + +GA +R LP EFC+R FV G A+EDG GN++Y Sbjct: 1 MGSVAVGDTRAASLRLRDMIKTWMLDHGAETIRNLPGLEFCERKFVMGLASEDGFGNNMY 60
Query: 615 KILTAAGLSIMLNRSLIV 668 K+L+ AGL++MLNRSLI+ Sbjct: 61 KVLSGAGLALMLNRSLII 78
>tr|A7P9Y9|A7P9Y9_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037905001 PE=4 SV=1 Length = 501
Score = 80.1 bits (196), Expect = 1e-13 Identities = 37/71 (52%), Positives = 48/71 (67%) Frame = +3
Query: 399 GSPSKSCATVEEMGRVAVSSYADSTLRVRKRIKAYFRQNGASHVRELPAKEFCQRGFVFG 578 GS K CATVEEMG + V + + LRVR+ I+ +F +GAS VR+LP FC GFV G Sbjct: 24 GSDIKGCATVEEMGEIFVGGFREENLRVRRMIQDHFALHGASRVRDLPPVHFCSHGFVLG 83
Query: 579 RAAEDGLGNDI 611 +A+E G GN+I Sbjct: 84 KASEAGFGNEI 94
>tr|A5AIV1|A5AIV1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023351 PE=4 SV=1 Length = 541
Score = 68.2 bits (165), Expect = 5e-10 Identities = 32/67 (47%), Positives = 47/67 (70%) Frame = +3
Query: 417 CATVEEMGRVAVSSYADSTLRVRKRIKAYFRQNGASHVRELPAKEFCQRGFVFGRAAEDG 596 CATVEEMG +L+VR+ I+ +F +GAS VRELP ++FC++GFV G+A++ G Sbjct: 110 CATVEEMGEAFGHVSWKESLKVRRLIRDHFALHGASRVRELPPEQFCKQGFVIGKASQAG 169
Query: 597 LGNDIYK 617 GN++ K Sbjct: 170 FGNEMGK 176
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