| DK950808 |
| Clone id |
TST38A01NGRL0009_L01 |
| Library |
TST38 |
| Length |
689 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_L01. 5' end sequence. |
| Accession |
DK950808 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL233Contig1 |
| Sequence |
CTGCGTGGGCGGAGCTTCGAGCAACTGAACGAAGGGCTTTGCTTAAGCGGAATTTCCCTC
TTAGGGCTACCGGTCAAAAGCTTCAGGCAGCTCAGACGCTCCTTGAGAAGGAGATGCTGC
AGATTCTGTTGTAGGTGTGTTCTCTTCACTCCGGTGAAGTGAAGACCGGTGATATGTACA
AAGATAGGGGTGATGGGCGTGGTGGAAGCCGTGAATCTATCGATGCTAAGAAGCGCATTG
AGGAGACTCTAGAGAGGACATCTCCTTCGACATCCAAGGGAAATGCAAGGGAAAAAGATC
GTGTTTCTATGGTGCCTGCATCAACTGGTAGACGCCTAGGCTCTGTTGACTTAAGGCCTA
CATTTGACAAGACCAAGTATGCAGACGATGGCGAAGAATCAGAGACTGACAGCGAAGAAT
CGGATGTTAGTGGATCAGATGGTGACGACACTTCTTGGGTTTCTTGGTTTTGCGGTTTGA
GAGGGAATGAGTTCTTTTGTGAGGTGGACTACGAGTACATTCAGGATGATTTCAATTTAA
GTGGACTAAGCAGCCAGGTCCCTTATTATGAGTATGCACTGGATTTGATTCTGGATGCAG
AGTCTCCGAATGTTGACATGTTAACTGATGAGCAGAATGAGATGGTGGAATCGGCTGCAG
AAATGCTGTATGGGTTAATCCATGTGCGC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P40228 |
| Definition |
sp|P40228|CSK2B_ARATH Casein kinase II subunit beta OS=Arabidopsis thaliana |
| Align length |
169 |
| Score (bit) |
131.0 |
| E-value |
4.0e-30 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9T768 |
| Definition |
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
162 |
| Score (bit) |
174.0 |
| E-value |
5.0e-42 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950808|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_L01, 5'
(689 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella paten... 174 5e-42
tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella paten... 157 5e-37
tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea... 147 5e-34
tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella paten... 144 5e-33
tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genom... 142 2e-32
tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Popul... 139 1e-31
tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2... 138 4e-31
tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 137 6e-31
tr|A9S7H2|A9S7H2_PHYPA Predicted protein OS=Physcomitrella paten... 135 2e-30
tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS... 134 5e-30
tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative... 134 5e-30
tr|Q0KKA4|Q0KKA4_HORVU Casein kinase II beta OS=Hordeum vulgare ... 134 5e-30
tr|B8BIA2|B8BIA2_ORYSI Putative uncharacterized protein OS=Oryza... 134 5e-30
tr|Q8LPD2|Q8LPD2_TOBAC Protein kinase Ck2 regulatory subunit 2 O... 133 9e-30
tr|Q7XC26|Q7XC26_ORYSJ Casein kinase II beta-4 subunit, putative... 133 1e-29
tr|Q336R6|Q336R6_ORYSJ Os10g0564900 protein OS=Oryza sativa subs... 133 1e-29
tr|Q2V308|Q2V308_ARATH Uncharacterized protein At5g47080.3 OS=Ar... 132 2e-29
tr|Q3E8F5|Q3E8F5_ARATH Uncharacterized protein At5g47080.2 OS=Ar... 131 5e-29
tr|A5BGR6|A5BGR6_VITVI Putative uncharacterized protein OS=Vitis... 130 1e-28
tr|Q9FQF7|Q9FQF7_MAIZE Protein kinase CK2 regulatory subunit CK2... 129 1e-28
tr|B6SQ06|B6SQ06_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 129 1e-28
tr|B4FN07|B4FN07_MAIZE Putative uncharacterized protein OS=Zea m... 129 1e-28
tr|Q9FQF6|Q9FQF6_MAIZE Protein kinase CK2 regulatory subunit CK2... 127 5e-28
tr|Q84VF5|Q84VF5_ORYSJ Possible protein kinase CK2 regulatory su... 127 5e-28
tr|Q84RS4|Q84RS4_ORYSJ Os07g0495100 protein OS=Oryza sativa subs... 127 5e-28
tr|Q24JI1|Q24JI1_ARATH At3g60250 (Regulatory subunit of protein ... 127 5e-28
tr|B8B6D0|B8B6D0_ORYSI Putative uncharacterized protein OS=Oryza... 127 5e-28
tr|B6TIH0|B6TIH0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 127 5e-28
tr|B6TGH2|B6TGH2_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 127 5e-28
tr|B4G0Y3|B4G0Y3_MAIZE Putative uncharacterized protein OS=Zea m... 127 5e-28
>tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_59578 PE=4 SV=1
Length = 298
Score = 174 bits (441), Expect = 5e-42
Identities = 93/162 (57%), Positives = 110/162 (67%), Gaps = 2/162 (1%)
Frame = +3
Query: 210 RESIDAKKRIEETLERTSPSTSKGN-AREKDRVSMVPAST-GRRLGSVDLRPTFDKTKYA 383
R+ D KKR+E+ ++++SPSTS+G REKDR++ A+T RR + RPT +K KY
Sbjct: 26 RDVTDNKKRLEDGIDKSSPSTSRGGIGREKDRIAAPAATTQSRRNAGHETRPTMEKAKYP 85
Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDYEYIQDDFNLSGLSSQVP 563
FC LRGNEFFCEVD EYIQDDFNLSGLSSQVP
Sbjct: 86 EDAEDSESESEDSDVSASDGEDTSWISWFCSLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 145
Query: 564 YYEYALDLILDAESPNVDMLTDEQNEMVESAAEMLYGLIHVR 689
YY+YALDLILD ESP+ DMLT+EQNE+VESAAEMLYGLIHVR
Sbjct: 146 YYDYALDLILDVESPSDDMLTEEQNELVESAAEMLYGLIHVR 187
>tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219176 PE=4 SV=1
Length = 299
Score = 157 bits (398), Expect = 5e-37
Identities = 92/165 (55%), Positives = 105/165 (63%), Gaps = 5/165 (3%)
Frame = +3
Query: 210 RESIDAKKRIEETLERTSP-STSKGN-AREKDRVSMVPASTGR-RLGSVDLRPTFDKTKY 380
R+ D KKR E + P STSKG REKDR++ + T R +++ RPT +K KY
Sbjct: 24 RDVTDNKKRFEGGIPLLQPPSTSKGLIGREKDRIAAAASKTQTSRNAALEARPTLEKAKY 83
Query: 381 AXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FCGLRGNEFFCEVDYEYIQDDFNLSGLSS 554
FCGLRGNEFFCEVD EYIQDDFNLSGLSS
Sbjct: 84 PEDVAAEDSESESEDSDVSASDGEDTSWISWFCGLRGNEFFCEVDDEYIQDDFNLSGLSS 143
Query: 555 QVPYYEYALDLILDAESPNVDMLTDEQNEMVESAAEMLYGLIHVR 689
QVPYY+YALDLILD ESP+ DMLT+EQNE+VESAAEMLYGLIHVR
Sbjct: 144 QVPYYDYALDLILDVESPSDDMLTEEQNELVESAAEMLYGLIHVR 188
>tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 297
Score = 147 bits (372), Expect = 5e-34
Identities = 87/161 (54%), Positives = 97/161 (60%), Gaps = 7/161 (4%)
Frame = +3
Query: 228 KKRIEETL------ERTSPSTSKGNAREKDRVSMVPASTGRRL-GSVDLRPTFDKTKYAX 386
+KRI + L E++ PSTSKG R+S+ S GRR G DKT YA
Sbjct: 29 RKRINDALDKHLHLEKSPPSTSKGL---NGRLSIPSTSAGRRAPGDSRNASALDKTNYAE 85
Query: 387 XXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDYEYIQDDFNLSGLSSQVPY 566
FC LRGNEFFCEVD EYIQDDFNL GLSSQVPY
Sbjct: 86 DVEDSDTDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPY 145
Query: 567 YEYALDLILDAESPNVDMLTDEQNEMVESAAEMLYGLIHVR 689
Y+YALDLILD ES N D+LT+EQNE+VESAAEMLYGLIHVR
Sbjct: 146 YDYALDLILDVESSNDDILTEEQNELVESAAEMLYGLIHVR 186
>tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_116155 PE=4 SV=1
Length = 249
Score = 144 bits (363), Expect = 5e-33
Identities = 81/154 (52%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Frame = +3
Query: 231 KRIEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 407
KR+++ +E++S STSKG +EKDR++ A+T + L + DL +++ +
Sbjct: 2 KRLDDGIEKSSASTSKGWIGKEKDRLAPAAAAT-QILVAEDLESESEESDVSGSDGEDTA 60
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDYEYIQDDFNLSGLSSQVPYYEYALDL 587
FCGLRGNEFFCE+D EYIQDDFNLSGL SQVPYY+YALDL
Sbjct: 61 WISW----------------FCGLRGNEFFCEIDDEYIQDDFNLSGLRSQVPYYDYALDL 104
Query: 588 ILDAESPNVDMLTDEQNEMVESAAEMLYGLIHVR 689
ILD E P+ D+LT+EQNE+VESAAEMLYGLIHVR
Sbjct: 105 ILDVEPPSDDILTEEQNELVESAAEMLYGLIHVR 138
>tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019032001
PE=4 SV=1
Length = 288
Score = 142 bits (358), Expect = 2e-32
Identities = 81/154 (52%), Positives = 100/154 (64%), Gaps = 3/154 (1%)
Frame = +3
Query: 237 IEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKT--KYAXXXXXXXX 407
+++ LE++SPSTSKG ++++K+R+S+ S G+ +D R T + K
Sbjct: 28 LDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGK--SQLDHRDTRAASLPKNKCSDEESET 85
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDYEYIQDDFNLSGLSSQVPYYEYALDL 587
FC LRGNEFFCEVD EYIQDDFNL GLSSQVPYY+YALDL
Sbjct: 86 DSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDL 145
Query: 588 ILDAESPNVDMLTDEQNEMVESAAEMLYGLIHVR 689
ILD ES + DM T+EQNE+VESAAEMLYGLIHVR
Sbjct: 146 ILDVESSHGDMFTEEQNELVESAAEMLYGLIHVR 179
>tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 330
Score = 139 bits (351), Expect = 1e-31
Identities = 81/163 (49%), Positives = 100/163 (61%), Gaps = 12/163 (7%)
Frame = +3
Query: 237 IEETLERTSPSTSKG---NAREKDRVSMVPASTGRRLGS---------VDLRPTFDKTKY 380
+++ LE++SPSTS+G ++++K+R+S+ STG+ L D R +K
Sbjct: 31 LDKHLEKSSPSTSRGLNNSSKDKERLSVPSTSTGKSLQHHQQQLDHHRADSRSA-SLSKN 89
Query: 381 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDYEYIQDDFNLSGLSSQV 560
FC LRGNEFFCEVD EYIQDDFNL GLSSQV
Sbjct: 90 KCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQV 149
Query: 561 PYYEYALDLILDAESPNVDMLTDEQNEMVESAAEMLYGLIHVR 689
PYY+YALDLILD ES + DM T+EQNE+VESAAEMLYGLIHVR
Sbjct: 150 PYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVR 192
>tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2B1
(Putative uncharacterized protein) OS=Zea mays PE=2 SV=1
Length = 276
Score = 138 bits (347), Expect = 4e-31
Identities = 79/156 (50%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Frame = +3
Query: 228 KKRIEETLERTSPSTSKG--NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXX 401
+KRI E ++R+SPSTS G REK+R+ + R G + K A
Sbjct: 16 RKRIGEPMDRSSPSTSWGFSGGREKERIGVGKQPEMPRSGGGSTAMSKSKLSDAESETDS 75
Query: 402 XXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDYEYIQDDFNLSGLSSQVPYYEYAL 581
FC L+GNEFFCEVD +YIQDDFNL GLS+QVPYY+YAL
Sbjct: 76 EESDVSGSDGEDTSWISW----FCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYAL 131
Query: 582 DLILDAESPNVDMLTDEQNEMVESAAEMLYGLIHVR 689
DLILD ES + DMLT+EQNE++ESAAEMLYGLIHVR
Sbjct: 132 DLILDVESSHGDMLTEEQNELIESAAEMLYGLIHVR 167
>tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea mays
PE=2 SV=1
Length = 275
Score = 137 bits (345), Expect = 6e-31
Identities = 79/156 (50%), Positives = 96/156 (61%), Gaps = 2/156 (1%)
Frame = +3
Query: 228 KKRIEETLERTSPSTSKG--NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXX 401
+KRI E ++R+SPSTS G REK+R+ + R G K+K +
Sbjct: 16 RKRIGEPMDRSSPSTSWGFSGGREKERIGVGKQPEMPRSGGGST--AMSKSKLSDESETD 73
Query: 402 XXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDYEYIQDDFNLSGLSSQVPYYEYAL 581
FC L+GNEFFCEVD +YIQDDFNL GLS+QVPYY+YAL
Sbjct: 74 SEESDVSGSDGEDTSWISW---FCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYAL 130
Query: 582 DLILDAESPNVDMLTDEQNEMVESAAEMLYGLIHVR 689
DLILD ES + DMLT+EQNE++ESAAEMLYGLIHVR
Sbjct: 131 DLILDVESSHGDMLTEEQNELIESAAEMLYGLIHVR 166
>tr|A9S7H2|A9S7H2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_75590 PE=4 SV=1
Length = 267
Score = 135 bits (340), Expect = 2e-30
Identities = 82/154 (53%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
Frame = +3
Query: 231 KRIEETLERTSPSTSKGN-AREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 407
KR++ +E PSTSKG +EK+R++ AST + V L +
Sbjct: 2 KRLDAGVENPCPSTSKGGIGKEKERLAPA-ASTSQSHRLVKLG-SLCGLFLQLAAEDSES 59
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDYEYIQDDFNLSGLSSQVPYYEYALDL 587
FCGLRGNEFFCEVD EYIQDDFNLSGLSS VPYY+YALDL
Sbjct: 60 ESEDSDVSGSDGEDTSWISWFCGLRGNEFFCEVDDEYIQDDFNLSGLSSHVPYYDYALDL 119
Query: 588 ILDAESPNVDMLTDEQNEMVESAAEMLYGLIHVR 689
ILD SP+ DMLT+EQNE VESAAEMLYGLIHVR
Sbjct: 120 ILDVGSPSDDMLTEEQNEPVESAAEMLYGLIHVR 153
>tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit
OS=Oryza sativa GN=OSJNBa0027P10.8 PE=4 SV=1
Length = 280
Score = 134 bits (337), Expect = 5e-30
Identities = 75/154 (48%), Positives = 95/154 (61%)
Frame = +3
Query: 228 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 407
K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K +
Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDYEYIQDDFNLSGLSSQVPYYEYALDL 587
FC LRGNEFFCE+D +YIQDDFNL GLS+QVPYY+YALDL
Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 588 ILDAESPNVDMLTDEQNEMVESAAEMLYGLIHVR 689
ILD ES N D+ T+EQNE++ES+AEMLYGLIH R
Sbjct: 137 ILDIESSNGDVFTEEQNELIESSAEMLYGLIHAR 170
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