DK950826 |
Clone id |
TST38A01NGRL0009_L19 |
Library |
TST38 |
Length |
677 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_L19. 5' end sequence. |
Accession |
DK950826 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GGCTCTTGCAAATCTTTGTTAACTTAATAGGAAATGGGATAAAGTTCACCAAGGAAGGGG AGGTGGTTGTATCTGTTTCTGTCAAAAGTAGACTGGAAGATATTGTAGAGCTACTTTTTG CTGTTAAAGATACTGGGTTGGGCATACCTAAAGACAAACAACCAATCCTGTTTCAGGCTT TCTCCCAAGTAGATTCCTCCACACAAAGACTGTATGGAGGAACAGGTCTGGGCCTGGTAA TTTCAGCCAAACTTGCTACTGCAATGAAGGGGGCAATGTGGGTGGAAAGTGACGGCATAG AAGATCATGGAAGCACATTTTGGTTTACGGCTAAATTTCGTTTAGTCCCATCTTCGAATA CAGAAAGATTTCCACTGCCAGTTTTCAAGGATGTGCGCGGTCTTGTTGTTGATGATAATG AAACCAATAGGAGGATTCTCGTAAACTTGCTGAAAAGTTGGGGAATGAAGGTCCAGGCTG AGGGCAGTGTGGAAGCTGCCTTATCAGTTCTGCAGCACGCAGCTAATCTAGGTCAAAAGT TTAATGTGCTTCTACTAGATTTACGGTTAAAAGGCACAGATGCTTCTGAATTGATCTCTG CTCTTCATCAAGAGCCTGCTCTCTTAGAAAACCGTGCATCAGAAACCTCCTGGAGAAATA AGGAAAATGTCCTCCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54YZ9 |
Definition |
sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium discoideum |
Align length |
199 |
Score (bit) |
126.0 |
E-value |
1.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950826|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_L19, 5' (677 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase... 126 1e-28 sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein rpfC OS=Xanthomo... 107 6e-23 sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein rpfC OS=Xanthomo... 107 6e-23 sp|Q86CZ2|DHKK_DICDI Hybrid signal transduction histidine kinase... 103 8e-22 sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum... 99 2e-20 sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=E... 98 4e-20 sp|P48027|GACS_PSESY Sensor protein gacS OS=Pseudomonas syringae... 97 8e-20 sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinas... 94 5e-19 sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum... 93 1e-18 sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinas... 93 1e-18 sp|P0AEC6|BARA_ECOL6 Signal transduction histidine-protein kinas... 93 1e-18 sp|P0AEC7|BARA_ECO57 Signal transduction histidine-protein kinas... 93 1e-18 sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR... 92 3e-18 sp|Q95PI2|DHKC_DICDI Hybrid signal transduction histidine kinase... 92 3e-18 sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum... 91 6e-18 sp|P49333|ETR1_ARATH Ethylene receptor OS=Arabidopsis thaliana G... 91 6e-18 sp|O82436|ETR1_CUCMR Ethylene receptor OS=Cucumis melo var. reti... 91 7e-18 sp|O14002|MAK2_SCHPO Peroxide stress-activated histidine kinase ... 89 2e-17 sp|O49230|ETR1_BRAOL Ethylene receptor OS=Brassica oleracea GN=E... 88 5e-17 sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1... 87 6e-17 sp|Q9SSY6|ETR1_CUCSA Ethylene receptor OS=Cucumis sativus GN=ETR... 87 6e-17 sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase... 86 1e-16 sp|Q869S5|DOKA_DICDI Hybrid signal transduction protein dokA OS=... 86 2e-16 sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=E... 83 1e-15 sp|P16575|BVGS_BORPE Virulence sensor protein bvgS OS=Bordetella... 83 1e-15 sp|P39453|TORS_ECOLI Sensor protein torS OS=Escherichia coli (st... 83 2e-15 sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum... 82 3e-15 sp|P26762|BVGS_BORBR Virulence sensor protein bvgS OS=Bordetella... 82 3e-15 sp|P40330|BVGS_BORPA Virulence sensor protein bvgS OS=Bordetella... 81 4e-15 sp|P58356|TORS_ECO57 Sensor protein torS OS=Escherichia coli O15... 80 1e-14
>sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium discoideum GN=dhkJ PE=3 SV=2 Length = 2062
Score = 126 bits (316), Expect = 1e-28 Identities = 78/199 (39%), Positives = 112/199 (56%), Gaps = 1/199 (0%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLE-DIVELLFAVKDTGLGIPKDKQPILFQA 179 L QI NL+GN IKFT +GE + L V L F+V DTG+GIPKDK ++F+A Sbjct: 1463 LRQIVNNLVGNAIKFTSQGEVDLVVKVEKSLSCGEVVLKFSVIDTGIGIPKDKLHLIFEA 1522
Query: 180 FSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSN 359 FSQ D S R YGGTGLGL IS +L MKG + V S GSTF FTA+F P+S Sbjct: 1523 FSQADGSITRRYGGTGLGLTISTRLVELMKGKLSVVSK--SGKGSTFEFTAQF---PTSP 1577
Query: 360 TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANLGQK 539 + DV L+VDDN++ ++L +L +G+ + + + A +++ A + Sbjct: 1578 NQLPLTEKLNDVHTLIVDDNKSTLKVLKQILSEFGITSEVSNNTQDAFNMIVKATKTTKP 1637
Query: 540 FNVLLLDLRLKGTDASELI 596 F + +D +L GT +++ Sbjct: 1638 FEFIFVDAQL-GTSLIDMM 1655
Score = 36.2 bits (82), Expect = 0.16 Identities = 23/80 (28%), Positives = 48/80 (60%), Gaps = 3/80 (3%) Frame = +3
Query: 339 RLVPSSNTERFPLP--VFKDVRGLVVDDNETNRRILVNLLKSWGMKVQ-AEGSVEAALSV 509 R +P ++ L +F D+ L+ +DN N+R+ + LL+ +G +VQ AE ++A Sbjct: 1711 RQIPKQLCKKIQLTSEIFGDI--LLAEDNAVNQRLAIRLLEKFGHRVQLAENGLQAV--- 1765
Query: 510 LQHAANLGQKFNVLLLDLRL 569 A++ +KF+++L+D+++ Sbjct: 1766 ---ASSQLRKFDLILMDVQM 1782
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein rpfC OS=Xanthomonas campestris pv. campestris GN=rpfC PE=3 SV=1 Length = 677
Score = 107 bits (267), Expect = 6e-23 Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 29/230 (12%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKS-RLEDIVELLFAVKDTGLGIPKDKQPILFQA 179 L Q+ +NL+GN +KFT+ G S ED V L F V+DTG+G+P D +P LF+A Sbjct: 256 LRQVLLNLVGNAVKFTEHGHVLLRVTRVSGSAEDAVRLRFDVEDTGIGVPMDMRPRLFEA 315
Query: 180 FSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRL----- 344 F Q D R Y GTGLG I+ L AM G++ + + + GS FWF + Sbjct: 316 FEQADVGLSRRYEGTGLGTTIAKGLVEAMGGSIGFKEN--QPSGSVFWFELPMAIGEPLK 373
Query: 345 -----------------VPSSNTERFPLPVF------KDVRGLVVDDNETNRRILVNLLK 455 + SSN F P + +R LV DD+E NR +L LL+ Sbjct: 374 SSTVRVPTGALVDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEANRMVLQRLLE 433
Query: 456 SWGMKVQAEGSVEAALSVLQHAANLGQKFNVLLLDLRLKGTDASELISAL 605 G KV E L + + ++ +++DL + G + +++ L Sbjct: 434 KAGHKVLCVNGAEQVLDAMAE-----EDYDAVIVDLHMPGMNGLDMLKQL 478
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein rpfC OS=Xanthomonas campestris pv. campestris (strain 8004) GN=rpfC PE=3 SV=1 Length = 677
Score = 107 bits (267), Expect = 6e-23 Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 29/230 (12%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKS-RLEDIVELLFAVKDTGLGIPKDKQPILFQA 179 L Q+ +NL+GN +KFT+ G S ED V L F V+DTG+G+P D +P LF+A Sbjct: 256 LRQVLLNLVGNAVKFTEHGHVLLRVTRVSGSAEDAVRLRFDVEDTGIGVPMDMRPRLFEA 315
Query: 180 FSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRL----- 344 F Q D R Y GTGLG I+ L AM G++ + + + GS FWF + Sbjct: 316 FEQADVGLSRRYEGTGLGTTIAKGLVEAMGGSIGFKEN--QPSGSVFWFELPMAIGEPLK 373
Query: 345 -----------------VPSSNTERFPLPVF------KDVRGLVVDDNETNRRILVNLLK 455 + SSN F P + +R LV DD+E NR +L LL+ Sbjct: 374 SSTVRVPTGALVDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEANRMVLQRLLE 433
Query: 456 SWGMKVQAEGSVEAALSVLQHAANLGQKFNVLLLDLRLKGTDASELISAL 605 G KV E L + + ++ +++DL + G + +++ L Sbjct: 434 KAGHKVLCVNGAEQVLDAMAE-----EDYDAVIVDLHMPGMNGLDMLKQL 478
>sp|Q86CZ2|DHKK_DICDI Hybrid signal transduction histidine kinase K OS=Dictyostelium discoideum GN=dhkK PE=1 SV=1 Length = 1213
Score = 103 bits (257), Expect = 8e-22 Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 16/219 (7%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELL-------FAVKDTGLGIPKDKQ 161 +LQI +NL GN +KFT+ G ++V L F VKDTG+G+P + Sbjct: 933 ILQILMNLTGNALKFTQSGYVKIIIDLIEEESELVSLKKGEYNISFRVKDTGIGVPVESH 992
Query: 162 PILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFR 341 +F+AF Q D S R YGG+GLGL + AKL MKG + V ++ D GSTFWF Sbjct: 993 QKIFEAFVQADPSDSRKYGGSGLGLYLCAKLVRLMKGEIGVYNNPDCD-GSTFWFILPLE 1051
Query: 342 ------LVPSSNTERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAAL 503 + +N R V+ L+ +DN N+R+ V L+ G+K + G+ L Sbjct: 1052 EGTDQSMQQMNNGARHKAFPQDCVKVLIAEDNIINQRVAVKFLEKIGIKAEVAGNGNEVL 1111
Query: 504 SVLQHAANLGQKFNVLLLDLR---LKGTDASELISALHQ 611 +L+ Q ++++ +D + L G S+ I Q Sbjct: 1112 EILER-----QHYDLIFMDFQMPILDGLRCSKTIREFEQ 1145
>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=2 SV=1 Length = 754
Score = 99.0 bits (245), Expect = 2e-20 Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 25/228 (10%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSR---------------LEDIVELLFAVKDTG 137 L+QI +N++GN +KF+KEG E+ L +KDTG Sbjct: 474 LMQILLNVVGNAVKFSKEGNVSISAFVAKSDSLRDPRAPEFFAVPSENHFYLRVQIKDTG 533
Query: 138 LGIPKDKQPILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGST 317 +GI P LF F+Q + GGTGLGL I + M+G +W+ES+G+ GST Sbjct: 534 IGITPQDIPNLFSKFTQSQALATTNSGGTGLGLAICKRFVNLMEGHIWIESEGL-GKGST 592
Query: 318 FWFTAKFRLVPSSNTERFP----LPV------FKDVRGLVVDDNETNRRILVNLLKSWGM 467 F K + +N + P LP F+ ++ LV+D+N +R + LL G Sbjct: 593 AIFIIKLGIPGRANESKLPFVTKLPANHTQMSFQGLKVLVMDENGVSRMVTKGLLTHLGC 652
Query: 468 KVQAEGSVEAALSVLQHAANLGQKFNVLLLDLRLKGTDASELISALHQ 611 V GS + L V+ H + V+++D+ ++G D E+ +H+ Sbjct: 653 DVTTVGSRDECLRVVTH------EHKVVIMDVSMQGIDCYEVAVVIHE 694
>sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=2 SV=1 Length = 738
Score = 98.2 bits (243), Expect = 4e-20 Identities = 73/236 (30%), Positives = 109/236 (46%), Gaps = 25/236 (10%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKS---------------RLEDIVELLFAVKDTG 137 L+QI +N++GN +KF+KEG + E+ L VKDTG Sbjct: 458 LMQILLNVVGNAVKFSKEGSVSISAVAAKSESLSDPRAPEFFPVQSENHFYLRVQVKDTG 517
Query: 138 LGIPKDKQPILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGST 317 GI P LF F+Q + + GGTGLGL IS + M+G +W+ES+G+ GST Sbjct: 518 SGINPQDIPKLFCKFAQNQALATKSSGGTGLGLAISKRFVNLMEGHIWIESEGL-GKGST 576
Query: 318 FWFTAKFRLVPSSNTERFP----LP------VFKDVRGLVVDDNETNRRILVNLLKSWGM 467 F K + SN + P LP F+ ++ L++DDN +R + LL G Sbjct: 577 AIFIVKLGIPGRSNEPKLPFMPRLPANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGC 636
Query: 468 KVQAEGSVEAALSVLQHAANLGQKFNVLLLDLRLKGTDASELISALHQEPALLENR 635 V S + L VL Q+ V+ +D+ + G D E+ +H++ NR Sbjct: 637 DVTTVSSGDECLRVLT------QEHKVVFMDVSIPGIDCYEVAVQIHEKFGKHHNR 686
>sp|P48027|GACS_PSESY Sensor protein gacS OS=Pseudomonas syringae pv. syringae GN=gacS PE=3 SV=1 Length = 907
Score = 97.1 bits (240), Expect = 8e-20 Identities = 66/197 (33%), Positives = 99/197 (50%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182 L QI NL+ N IKFT+EG + E+ +L +V+DTG+G+ LFQAF Sbjct: 391 LRQILTNLVSNAIKFTREGTIVARAMLEDETEEHAQLRISVQDTGIGLSSQDVRALFQAF 450
Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362 SQ D+S R GGTGLGLVIS +L M G + V+S E GS FW + K Sbjct: 451 SQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGE--GSEFWISLKLPKAREDKE 508
Query: 363 ERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANLGQKF 542 E +P+ +R V++ ++ R+ L + L+ G++ ++E L+ + A Sbjct: 509 ESLNIPL-GGLRAAVLEHHDLARQALEHQLEDCGLQTIVFNNLENLLNGVTAAHE----- 562
Query: 543 NVLLLDLRLKGTDASEL 593 +DL + G A E+ Sbjct: 563 TPAAIDLAVLGVTALEI 579
>sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinase barA OS=Shigella flexneri GN=barA PE=3 SV=1 Length = 918
Score = 94.4 bits (233), Expect = 5e-19 Identities = 57/157 (36%), Positives = 81/157 (51%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182 L QI NL+GN IKFT+ G ++ V++ ++DTG+GIP+ Q LFQAF Sbjct: 409 LQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAF 468
Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362 Q D+S R +GGTGLGLVI+ KL M G + S + GSTFWF L P+ Sbjct: 469 RQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQ--PNRGSTFWFHINLDLNPNIII 526
Query: 363 ERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKV 473 E + R V+ N + +++L ++V Sbjct: 527 EGPSIQCLAGKRLAYVEPNSAAAQCTLDILSETPLEV 563
>sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR2 PE=2 SV=1 Length = 736
Score = 93.2 bits (230), Expect = 1e-18 Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 32/257 (12%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVE----------------LLFAVKDT 134 L+QI +N++GN +KF+KEG ++ E +++ L VKDT Sbjct: 458 LMQILLNVVGNAVKFSKEGSVSVSAV-NAKSESLIDPRAPEFFPVQSENHFYLRVQVKDT 516
Query: 135 GLGIPKDKQPILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGS 314 G GI P LF F+Q + GTGLGL I + M+G +W+ES+G+ GS Sbjct: 517 GSGINPQDFPKLFCKFAQNQEPATKNSAGTGLGLAICKRFVNLMEGHIWIESEGV-GKGS 575
Query: 315 TFWFTAKFRLVPSSNTERFP----LP------VFKDVRGLVVDDNETNRRILVNLLKSWG 464 T F K + N + P LP F+ ++ LV+DDN +R + +LL G Sbjct: 576 TAIFIVKLGIPGRLNESKLPFTAGLPANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLG 635
Query: 465 MKVQAEGSVEAALSVLQHAANLGQKFNVLLLDLRLKGTDASELISALHQ------EPALL 626 V GS + L +L ++ VL++D + G + ++ ++H+ E L+ Sbjct: 636 CDVTTIGSGDECLRILT------REHKVLIMDASITGMNCYDVAVSVHEKFGKRLERPLI 689
Query: 627 ENRASETSWRNKENVLQ 677 T KEN L+ Sbjct: 690 VALTGNTDQVTKENCLR 706
>sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinase barA OS=Escherichia coli (strain K12) GN=barA PE=1 SV=1 Length = 918
Score = 93.2 bits (230), Expect = 1e-18 Identities = 57/157 (36%), Positives = 80/157 (50%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182 L QI NL+GN IKFT+ G ++ V++ ++DTG+GIP+ Q LFQAF Sbjct: 409 LQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAF 468
Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362 Q D+S R +GGTGLGLVI+ KL M G + S + GSTFWF L P+ Sbjct: 469 RQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQ--PNRGSTFWFHINLDLNPNIII 526
Query: 363 ERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKV 473 E R V+ N + +++L ++V Sbjct: 527 EGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEV 563
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TN92 |
Definition |
tr|A9TN92|A9TN92_PHYPA Sensory histidine protein kinase OS=Physcomitrella patens subsp. patens |
Align length |
209 |
Score (bit) |
225.0 |
E-value |
2.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950826|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_L19, 5' (677 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TN92|A9TN92_PHYPA Sensory histidine protein kinase OS=Physc... 225 2e-57 tr|A9SKR6|A9SKR6_PHYPA Sensory histidine protein kinase (Fragmen... 168 3e-40 tr|B4CU67|B4CU67_9BACT Multi-sensor hybrid histidine kinase OS=C... 157 8e-37 tr|Q1Q3E7|Q1Q3E7_9BACT Sensor protein OS=Candidatus Kuenenia stu... 156 1e-36 tr|B0C7P6|B0C7P6_ACAM1 Sensor protein OS=Acaryochloris marina (s... 154 4e-36 tr|B4VIH4|B4VIH4_9CYAN PAS fold family OS=Microcoleus chthonopla... 152 1e-35 tr|A4BV91|A4BV91_9GAMM Sensor protein OS=Nitrococcus mobilis Nb-... 150 7e-35 tr|B0TG16|B0TG16_HELMI Sensor protein OS=Heliobacterium modestic... 150 9e-35 tr|Q4C3N3|Q4C3N3_CROWT Sensor protein OS=Crocosphaera watsonii G... 149 2e-34 tr|A3ISV2|A3ISV2_9CHRO Sensor protein (Fragment) OS=Cyanothece s... 146 1e-33 tr|B1WQ85|B1WQ85_CYAA5 Two-component hybrid sensor and regulator... 145 2e-33 tr|B7S1F5|B7S1F5_9GAMM Response regulator receiver domain protei... 145 2e-33 tr|A6C2E4|A6C2E4_9PLAN Sensor protein OS=Planctomyces maris DSM ... 145 2e-33 tr|B3EFL9|B3EFL9_CHLL2 Multi-sensor hybrid histidine kinase OS=C... 144 5e-33 tr|Q1NUH2|Q1NUH2_9DELT Sensor protein OS=delta proteobacterium M... 143 9e-33 tr|B4CUD1|B4CUD1_9BACT Integral membrane sensor hybrid histidine... 143 9e-33 tr|A6CBA6|A6CBA6_9PLAN Sensor protein OS=Planctomyces maris DSM ... 143 9e-33 tr|B4AX79|B4AX79_9CHRO Multi-sensor hybrid histidine kinase OS=C... 142 2e-32 tr|A4TYW8|A4TYW8_9PROT Sensor protein OS=Magnetospirillum gryphi... 142 2e-32 tr|B1ZZC2|B1ZZC2_OPITP Response regulator receiver sensor hybrid... 142 3e-32 tr|B1ZPP6|B1ZPP6_OPITP PAS/PAC sensor hybrid histidine kinase OS... 141 3e-32 tr|B7JUI6|B7JUI6_SYNP8 Hpt sensor hybrid histidine kinase OS=Syn... 141 3e-32 tr|Q2W680|Q2W680_MAGMM Sensor protein OS=Magnetospirillum magnet... 140 6e-32 tr|B4BZV3|B4BZV3_9CHRO Multi-sensor hybrid histidine kinase OS=C... 140 6e-32 tr|Q609M8|Q609M8_METCA Sensor protein OS=Methylococcus capsulatu... 140 7e-32 tr|Q7WZ30|Q7WZ30_METCA Sensor protein OS=Methylococcus capsulatu... 140 7e-32 tr|B4VZF4|B4VZF4_9CYAN PAS fold family OS=Microcoleus chthonopla... 140 1e-31 tr|Q1IJ91|Q1IJ91_ACIBL Sensor protein OS=Acidobacteria bacterium... 139 1e-31 tr|B4VND7|B4VND7_9CYAN PAS fold family OS=Microcoleus chthonopla... 139 1e-31 tr|B4VM91|B4VM91_9CYAN PAS fold family OS=Microcoleus chthonopla... 139 1e-31
>tr|A9TN92|A9TN92_PHYPA Sensory histidine protein kinase OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_196664 PE=4 SV=1 Length = 582
Score = 225 bits (573), Expect = 2e-57 Identities = 123/209 (58%), Positives = 147/209 (70%), Gaps = 1/209 (0%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182 L Q+FVNLIGN IKFT EGE KSR ED +ELLF+V+DTG+GIPK KQ +LFQAF Sbjct: 49 LFQVFVNLIGNSIKFTAEGEVIVSAKVKSRNEDNIELLFSVRDTGIGIPKQKQSLLFQAF 108
Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSN- 359 SQVDSST RLYGGTGLGLVIS+KLA AM G MWVES+G GSTF FTA F + P+ + Sbjct: 109 SQVDSSTTRLYGGTGLGLVISSKLAAAMGGTMWVESEG---KGSTFSFTANFHIPPACDL 165
Query: 360 TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANLGQK 539 + K++ LVVDDN NR ILV++LK WGM + +E A LQ AA+ Q+ Sbjct: 166 PSSLNVESLKNMHVLVVDDNNVNRNILVDMLKVWGMISEGVDGIEPAKVALQKAADADQQ 225
Query: 540 FNVLLLDLRLKGTDASELISALHQEPALL 626 F VLLLD+ L G DASEL++ LH+ P LL Sbjct: 226 FRVLLLDMWLHGKDASELVNFLHERPNLL 254
>tr|A9SKR6|A9SKR6_PHYPA Sensory histidine protein kinase (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_51178 PE=4 SV=1 Length = 330
Score = 168 bits (425), Expect = 3e-40 Identities = 92/147 (62%), Positives = 105/147 (71%), Gaps = 1/147 (0%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182 L Q+FVNLIGN IKFT EGE KSR D +ELLF+V+DTG+GIPK KQ +LFQAF Sbjct: 122 LFQVFVNLIGNSIKFTAEGEVIVSAMVKSRNGDNIELLFSVRDTGIGIPKQKQSLLFQAF 181
Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSN- 359 SQVDSST RLYGGTGLGLVIS+KLA AM G MWVES+G GSTF FTA F + P+ + Sbjct: 182 SQVDSSTTRLYGGTGLGLVISSKLAAAMGGTMWVESEG---KGSTFSFTANFHIPPACDL 238
Query: 360 TERFPLPVFKDVRGLVVDDNETNRRIL 440 + KD+ LVVDDN NR IL Sbjct: 239 PSSLNVESLKDMHVLVVDDNSVNRAIL 265
>tr|B4CU67|B4CU67_9BACT Multi-sensor hybrid histidine kinase OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_0230 PE=4 SV=1 Length = 1248
Score = 157 bits (396), Expect = 8e-37 Identities = 88/211 (41%), Positives = 118/211 (55%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182 L Q+ NLIGN +KFT +GE + E + F+V DTG+GI + Q LFQ F Sbjct: 716 LRQVLTNLIGNAVKFTDKGEVVVRANCQENAETHTTIRFSVTDTGIGISSEAQERLFQPF 775
Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362 Q D ST R +GGTGLGL I +L M G + V S+ GSTFWFTA+F Sbjct: 776 VQADGSTTRRFGGTGLGLAICKQLVARMGGEIGVTSEA--GKGSTFWFTARFEKQAGGGM 833
Query: 363 ERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANLGQKF 542 KDVR + VDDN+TNR IL +LL +WGM+ Q S + ALS+LQ A G+ F Sbjct: 834 AAPRPAKLKDVRVITVDDNDTNRAILHHLLSNWGMREQQAASGKQALSILQAEAGRGRMF 893
Query: 543 NVLLLDLRLKGTDASELISALHQEPALLENR 635 ++ +LD+++ D EL A+ ++P R Sbjct: 894 DLAILDMQMPEMDGLELARAMKKDPRFASAR 924
>tr|Q1Q3E7|Q1Q3E7_9BACT Sensor protein OS=Candidatus Kuenenia stuttgartiensis GN=gacS PE=3 SV=1 Length = 967
Score = 156 bits (394), Expect = 1e-36 Identities = 92/209 (44%), Positives = 122/209 (58%), Gaps = 2/209 (0%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182 L QI NLIGN IKFT+ GE LLF V DTG+G+P++KQ I+F F Sbjct: 443 LHQILTNLIGNAIKFTRTGEILLTGKRNKLPGKKGMLLFLVSDTGIGLPEEKQSIIFNIF 502
Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362 SQVDSST R YGGTGLGL I +L M G +WVES GSTF+FT F + P Sbjct: 503 SQVDSSTTRQYGGTGLGLAICKRLVELMDGEIWVES--TPGKGSTFYFTVTFDVHPKPQE 560
Query: 363 ER-FPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKV-QAEGSVEAALSVLQHAANLGQ 536 ++ PL + L++DDN TNR IL ++L W + V +AEG E ++ L+ A N G Sbjct: 561 QKEIPLSGAEKPYVLIIDDNATNRMILRDMLHGWDIPVAEAEGG-ENGINELKRARNAGT 619
Query: 537 KFNVLLLDLRLKGTDASELISALHQEPAL 623 +N+LLLD R+ G D ++ ++ +P L Sbjct: 620 PYNLLLLDCRMPGMDGFQIARSVKNDPEL 648
>tr|B0C7P6|B0C7P6_ACAM1 Sensor protein OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_0220 PE=4 SV=1 Length = 755
Score = 154 bits (390), Expect = 4e-36 Identities = 96/241 (39%), Positives = 135/241 (56%), Gaps = 21/241 (8%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLED--IVELLFAVKDTGLGIPKDKQPILFQ 176 L QI VNL+GN IKFT+ GE + D + EL FAV+DTG+GIP ++Q LF+ Sbjct: 352 LRQILVNLLGNAIKFTQSGEVVVNVSAEPFAADTPLYELSFAVRDTGMGIPAERQNRLFK 411
Query: 177 AFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSS 356 +FSQVDSST R +GGTGLGLVI +L+ M G +WVES+ E GSTF FT + + Sbjct: 412 SFSQVDSSTTRKFGGTGLGLVICKRLSELMGGRIWVESE--EGQGSTFAFTIQAEETEDT 469
Query: 357 N--TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANL 530 + P KD R L+VDDN+TN+R+L +SW MK Q S AL +L+HA Sbjct: 470 TVLAQSLPAVTLKDKRVLLVDDNDTNQRVLTLQTESWKMKPQVAASGYEALGLLEHAG-- 527
Query: 531 GQKFNVLLLDLRLKGTDASEL-----------------ISALHQEPALLENRASETSWRN 659 F++ +LD+++ D L ++++ Q P L ++ ++W N Sbjct: 528 --PFDIAILDMQMPEMDGLTLAQKIRSHPRGVNFPMVMLTSIGQAPDLAHHKGLFSAWLN 585
Query: 660 K 662 K Sbjct: 586 K 586
>tr|B4VIH4|B4VIH4_9CYAN PAS fold family OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_7722 PE=4 SV=1 Length = 1946
Score = 152 bits (385), Expect = 1e-35 Identities = 96/220 (43%), Positives = 124/220 (56%), Gaps = 15/220 (6%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXK-------------SRLEDIVELLFAVKDTGLG 143 L QI VNL+ N +KFT +GE K + E E+LFAVKDTG+G Sbjct: 1372 LRQILVNLLSNALKFTHQGEVTVSVSSKRVSPQSLEQLSHRTNKEQQYEILFAVKDTGIG 1431
Query: 144 IPKDKQPILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFW 323 IP D+ LF+AFSQVDSST R YGGTGLGLVIS +L+ M G +WVES+ GS F+ Sbjct: 1432 IPPDRLDRLFKAFSQVDSSTSRHYGGTGLGLVISKRLSEMMGGRIWVESE--VGKGSIFY 1489
Query: 324 FTAKFRLVPSSNTERFPL--PVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEA 497 FT + N L P + R L+VDDN TNRRIL +SWG+ +A S E Sbjct: 1490 FTIVAPVCHIDNLSNLDLRQPQLEGKRMLIVDDNATNRRILTLQGQSWGVLTRAAESGEQ 1549
Query: 498 ALSVLQHAANLGQKFNVLLLDLRLKGTDASELISALHQEP 617 AL LQ G+ F++ +LD+ + G D L S + ++P Sbjct: 1550 ALDWLQQ----GETFDLAILDMHMPGMDGVNLASQIRRQP 1585
>tr|A4BV91|A4BV91_9GAMM Sensor protein OS=Nitrococcus mobilis Nb-231 GN=NB231_06785 PE=4 SV=1 Length = 715
Score = 150 bits (379), Expect = 7e-35 Identities = 89/209 (42%), Positives = 117/209 (55%), Gaps = 2/209 (0%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182 L QI VNL+GN IKFT +GE +S + L F V DTG+GIP DK +F +F Sbjct: 180 LRQIVVNLVGNAIKFTTQGEVVLDVAYESPTNNAANLHFTVTDTGIGIPTDKLESIFDSF 239
Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362 Q D ST R +GGTGLGL IS++L M G +W ES+ GS F FT KF L Sbjct: 240 EQADMSTTRQFGGTGLGLAISSRLVKLMGGRIWAESE--LGCGSDFHFTMKFSLAAERPA 297
Query: 363 ERFPL-PVFKD-VRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANLGQ 536 E PL VF D VR L+VDDN TNR IL +L +WGM+ + +V L+ L+ A + Sbjct: 298 EAQPLEAVFPDNVRALIVDDNATNRLILNEMLGNWGMQATSVAAVAEGLAALRTAYAARR 357
Query: 537 KFNVLLLDLRLKGTDASELISALHQEPAL 623 F +++ D + G D +L + Q+ L Sbjct: 358 PFRLVITDCHMPGEDGFDLAEKIKQDGQL 386
>tr|B0TG16|B0TG16_HELMI Sensor protein OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=Helmi_02110 PE=3 SV=1 Length = 909
Score = 150 bits (378), Expect = 9e-35 Identities = 88/227 (38%), Positives = 127/227 (55%), Gaps = 2/227 (0%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXK-SRLEDIVELLFAVKDTGLGIPKDKQPILFQA 179 L QI +NL+GN +KFT+ GE + + + FAV DTG+GI DK+ ++F+ Sbjct: 505 LQQILINLMGNAVKFTERGEIVLQVERDPDQPGEAGAIRFAVSDTGIGIAADKKEVIFER 564
Query: 180 FSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSN 359 FSQ DSST R YGGTGLGL IS L MKG +WVES+ GSTF+FTA+F Sbjct: 565 FSQADSSTTRRYGGTGLGLTISRYLVEMMKGRIWVESE--LGKGSTFYFTARFGQADPIE 622
Query: 360 TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWG-MKVQAEGSVEAALSVLQHAANLGQ 536 P+ + +R L++DDNETNR IL +KSWG + V+A G E ++ ++ A G Sbjct: 623 EMSLPVEALRGIRVLIIDDNETNRIILRETVKSWGVVPVEASGGAE-GIAEMKRAKAQGL 681
Query: 537 KFNVLLLDLRLKGTDASELISALHQEPALLENRASETSWRNKENVLQ 677 + ++LLD R+ D ++ + E E + N+ + +Q Sbjct: 682 PYQLVLLDCRMPEMDGFQVAERIQAEVEFCEATVLMVTSDNRNDDIQ 728
>tr|Q4C3N3|Q4C3N3_CROWT Sensor protein OS=Crocosphaera watsonii GN=CwatDRAFT_3854 PE=4 SV=1 Length = 731
Score = 149 bits (376), Expect = 2e-34 Identities = 94/213 (44%), Positives = 124/213 (58%), Gaps = 8/213 (3%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXX------KSRLEDIVELLFAVKDTGLGIPKDKQP 164 L QI NLIGN +KFT EGE + + EL FAVKDTG+GIPK++ Sbjct: 195 LKQILANLIGNAVKFTPEGEVVIYVSSTVIEGGEGEVNPNYELRFAVKDTGIGIPKERCH 254
Query: 165 ILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRL 344 LFQ FSQVD+ST R YGGTGLGLVIS +L+ M G MWV S+ E GSTF FT + + Sbjct: 255 RLFQPFSQVDASTTRQYGGTGLGLVISKRLSELMGGKMWVHSE--EGKGSTFNFTLRAKA 312
Query: 345 VPSSN--TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQH 518 SS+ T + R L++DDN T+++IL+N +SWGM A S E AL L+ Sbjct: 313 ATSSSPVTSQEGESELMGKRVLIIDDNLTSQKILINQAQSWGMFTCAVDSGEKALEWLKR 372
Query: 519 AANLGQKFNVLLLDLRLKGTDASELISALHQEP 617 G F+V +LD+ L + EL+ + ++P Sbjct: 373 ----GITFDVAILDMNLPDMNGLELVREIRKQP 401
>tr|A3ISV2|A3ISV2_9CHRO Sensor protein (Fragment) OS=Cyanothece sp. CCY 0110 GN=CY0110_28659 PE=3 SV=1 Length = 881
Score = 146 bits (369), Expect = 1e-33 Identities = 96/214 (44%), Positives = 118/214 (55%), Gaps = 9/214 (4%) Frame = +3
Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXK-------SRLEDIVELLFAVKDTGLGIPKDKQ 161 L QI NLIGN +KFTK+GE S+ EL FAVKDTG+GIP D+ Sbjct: 354 LKQILANLIGNAVKFTKKGEVVIYVNATPIKSRQDSKQNSRYELRFAVKDTGIGIPSDRC 413
Query: 162 PILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFR 341 LFQ FSQVD+ST R YGGTGLGL IS L+ M G MWV S E GSTF FT + Sbjct: 414 NRLFQPFSQVDASTTRKYGGTGLGLAISKGLSELMGGNMWVHS--TEGKGSTFNFTIQTL 471
Query: 342 LVPSSN--TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQ 515 PSS+ T + R L++DDN TN++IL N +SWGM A S E AL L+ Sbjct: 472 AAPSSSPATSQEGERELMGKRMLIIDDNLTNQKILTNQAQSWGMFTCAVDSGEKALEWLR 531
Query: 516 HAANLGQKFNVLLLDLRLKGTDASELISALHQEP 617 G F+V +LD+ + D L + Q+P Sbjct: 532 R----GITFDVAILDMNMPNMDGVNLARQIRQQP 561
|