DK950826
Clone id TST38A01NGRL0009_L19
Library
Length 677
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_L19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
GGCTCTTGCAAATCTTTGTTAACTTAATAGGAAATGGGATAAAGTTCACCAAGGAAGGGG
AGGTGGTTGTATCTGTTTCTGTCAAAAGTAGACTGGAAGATATTGTAGAGCTACTTTTTG
CTGTTAAAGATACTGGGTTGGGCATACCTAAAGACAAACAACCAATCCTGTTTCAGGCTT
TCTCCCAAGTAGATTCCTCCACACAAAGACTGTATGGAGGAACAGGTCTGGGCCTGGTAA
TTTCAGCCAAACTTGCTACTGCAATGAAGGGGGCAATGTGGGTGGAAAGTGACGGCATAG
AAGATCATGGAAGCACATTTTGGTTTACGGCTAAATTTCGTTTAGTCCCATCTTCGAATA
CAGAAAGATTTCCACTGCCAGTTTTCAAGGATGTGCGCGGTCTTGTTGTTGATGATAATG
AAACCAATAGGAGGATTCTCGTAAACTTGCTGAAAAGTTGGGGAATGAAGGTCCAGGCTG
AGGGCAGTGTGGAAGCTGCCTTATCAGTTCTGCAGCACGCAGCTAATCTAGGTCAAAAGT
TTAATGTGCTTCTACTAGATTTACGGTTAAAAGGCACAGATGCTTCTGAATTGATCTCTG
CTCTTCATCAAGAGCCTGCTCTCTTAGAAAACCGTGCATCAGAAACCTCCTGGAGAAATA
AGGAAAATGTCCTCCAG
■■Homology search results ■■ -
sp_hit_id Q54YZ9
Definition sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium discoideum
Align length 199
Score (bit) 126.0
E-value 1.0e-28
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950826|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_L19, 5'
(677 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase... 126 1e-28
sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein rpfC OS=Xanthomo... 107 6e-23
sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein rpfC OS=Xanthomo... 107 6e-23
sp|Q86CZ2|DHKK_DICDI Hybrid signal transduction histidine kinase... 103 8e-22
sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum... 99 2e-20
sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=E... 98 4e-20
sp|P48027|GACS_PSESY Sensor protein gacS OS=Pseudomonas syringae... 97 8e-20
sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinas... 94 5e-19
sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum... 93 1e-18
sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinas... 93 1e-18
sp|P0AEC6|BARA_ECOL6 Signal transduction histidine-protein kinas... 93 1e-18
sp|P0AEC7|BARA_ECO57 Signal transduction histidine-protein kinas... 93 1e-18
sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR... 92 3e-18
sp|Q95PI2|DHKC_DICDI Hybrid signal transduction histidine kinase... 92 3e-18
sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum... 91 6e-18
sp|P49333|ETR1_ARATH Ethylene receptor OS=Arabidopsis thaliana G... 91 6e-18
sp|O82436|ETR1_CUCMR Ethylene receptor OS=Cucumis melo var. reti... 91 7e-18
sp|O14002|MAK2_SCHPO Peroxide stress-activated histidine kinase ... 89 2e-17
sp|O49230|ETR1_BRAOL Ethylene receptor OS=Brassica oleracea GN=E... 88 5e-17
sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1... 87 6e-17
sp|Q9SSY6|ETR1_CUCSA Ethylene receptor OS=Cucumis sativus GN=ETR... 87 6e-17
sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase... 86 1e-16
sp|Q869S5|DOKA_DICDI Hybrid signal transduction protein dokA OS=... 86 2e-16
sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=E... 83 1e-15
sp|P16575|BVGS_BORPE Virulence sensor protein bvgS OS=Bordetella... 83 1e-15
sp|P39453|TORS_ECOLI Sensor protein torS OS=Escherichia coli (st... 83 2e-15
sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum... 82 3e-15
sp|P26762|BVGS_BORBR Virulence sensor protein bvgS OS=Bordetella... 82 3e-15
sp|P40330|BVGS_BORPA Virulence sensor protein bvgS OS=Bordetella... 81 4e-15
sp|P58356|TORS_ECO57 Sensor protein torS OS=Escherichia coli O15... 80 1e-14

>sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J
OS=Dictyostelium discoideum GN=dhkJ PE=3 SV=2
Length = 2062

Score = 126 bits (316), Expect = 1e-28
Identities = 78/199 (39%), Positives = 112/199 (56%), Gaps = 1/199 (0%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLE-DIVELLFAVKDTGLGIPKDKQPILFQA 179
L QI NL+GN IKFT +GE + L V L F+V DTG+GIPKDK ++F+A
Sbjct: 1463 LRQIVNNLVGNAIKFTSQGEVDLVVKVEKSLSCGEVVLKFSVIDTGIGIPKDKLHLIFEA 1522

Query: 180 FSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSN 359
FSQ D S R YGGTGLGL IS +L MKG + V S GSTF FTA+F P+S
Sbjct: 1523 FSQADGSITRRYGGTGLGLTISTRLVELMKGKLSVVSK--SGKGSTFEFTAQF---PTSP 1577

Query: 360 TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANLGQK 539
+ DV L+VDDN++ ++L +L +G+ + + + A +++ A +
Sbjct: 1578 NQLPLTEKLNDVHTLIVDDNKSTLKVLKQILSEFGITSEVSNNTQDAFNMIVKATKTTKP 1637

Query: 540 FNVLLLDLRLKGTDASELI 596
F + +D +L GT +++
Sbjct: 1638 FEFIFVDAQL-GTSLIDMM 1655



Score = 36.2 bits (82), Expect = 0.16
Identities = 23/80 (28%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +3

Query: 339 RLVPSSNTERFPLP--VFKDVRGLVVDDNETNRRILVNLLKSWGMKVQ-AEGSVEAALSV 509
R +P ++ L +F D+ L+ +DN N+R+ + LL+ +G +VQ AE ++A
Sbjct: 1711 RQIPKQLCKKIQLTSEIFGDI--LLAEDNAVNQRLAIRLLEKFGHRVQLAENGLQAV--- 1765

Query: 510 LQHAANLGQKFNVLLLDLRL 569
A++ +KF+++L+D+++
Sbjct: 1766 ---ASSQLRKFDLILMDVQM 1782


>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein rpfC OS=Xanthomonas
campestris pv. campestris GN=rpfC PE=3 SV=1
Length = 677

Score = 107 bits (267), Expect = 6e-23
Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 29/230 (12%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKS-RLEDIVELLFAVKDTGLGIPKDKQPILFQA 179
L Q+ +NL+GN +KFT+ G S ED V L F V+DTG+G+P D +P LF+A
Sbjct: 256 LRQVLLNLVGNAVKFTEHGHVLLRVTRVSGSAEDAVRLRFDVEDTGIGVPMDMRPRLFEA 315

Query: 180 FSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRL----- 344
F Q D R Y GTGLG I+ L AM G++ + + + GS FWF +
Sbjct: 316 FEQADVGLSRRYEGTGLGTTIAKGLVEAMGGSIGFKEN--QPSGSVFWFELPMAIGEPLK 373

Query: 345 -----------------VPSSNTERFPLPVF------KDVRGLVVDDNETNRRILVNLLK 455
+ SSN F P + +R LV DD+E NR +L LL+
Sbjct: 374 SSTVRVPTGALVDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEANRMVLQRLLE 433

Query: 456 SWGMKVQAEGSVEAALSVLQHAANLGQKFNVLLLDLRLKGTDASELISAL 605
G KV E L + + ++ +++DL + G + +++ L
Sbjct: 434 KAGHKVLCVNGAEQVLDAMAE-----EDYDAVIVDLHMPGMNGLDMLKQL 478


>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein rpfC OS=Xanthomonas
campestris pv. campestris (strain 8004) GN=rpfC PE=3
SV=1
Length = 677

Score = 107 bits (267), Expect = 6e-23
Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 29/230 (12%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKS-RLEDIVELLFAVKDTGLGIPKDKQPILFQA 179
L Q+ +NL+GN +KFT+ G S ED V L F V+DTG+G+P D +P LF+A
Sbjct: 256 LRQVLLNLVGNAVKFTEHGHVLLRVTRVSGSAEDAVRLRFDVEDTGIGVPMDMRPRLFEA 315

Query: 180 FSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRL----- 344
F Q D R Y GTGLG I+ L AM G++ + + + GS FWF +
Sbjct: 316 FEQADVGLSRRYEGTGLGTTIAKGLVEAMGGSIGFKEN--QPSGSVFWFELPMAIGEPLK 373

Query: 345 -----------------VPSSNTERFPLPVF------KDVRGLVVDDNETNRRILVNLLK 455
+ SSN F P + +R LV DD+E NR +L LL+
Sbjct: 374 SSTVRVPTGALVDAPEELESSNIIAFSNPFLRHRARVRSMRMLVADDHEANRMVLQRLLE 433

Query: 456 SWGMKVQAEGSVEAALSVLQHAANLGQKFNVLLLDLRLKGTDASELISAL 605
G KV E L + + ++ +++DL + G + +++ L
Sbjct: 434 KAGHKVLCVNGAEQVLDAMAE-----EDYDAVIVDLHMPGMNGLDMLKQL 478


>sp|Q86CZ2|DHKK_DICDI Hybrid signal transduction histidine kinase K
OS=Dictyostelium discoideum GN=dhkK PE=1 SV=1
Length = 1213

Score = 103 bits (257), Expect = 8e-22
Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELL-------FAVKDTGLGIPKDKQ 161
+LQI +NL GN +KFT+ G ++V L F VKDTG+G+P +
Sbjct: 933 ILQILMNLTGNALKFTQSGYVKIIIDLIEEESELVSLKKGEYNISFRVKDTGIGVPVESH 992

Query: 162 PILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFR 341
+F+AF Q D S R YGG+GLGL + AKL MKG + V ++ D GSTFWF
Sbjct: 993 QKIFEAFVQADPSDSRKYGGSGLGLYLCAKLVRLMKGEIGVYNNPDCD-GSTFWFILPLE 1051

Query: 342 ------LVPSSNTERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAAL 503
+ +N R V+ L+ +DN N+R+ V L+ G+K + G+ L
Sbjct: 1052 EGTDQSMQQMNNGARHKAFPQDCVKVLIAEDNIINQRVAVKFLEKIGIKAEVAGNGNEVL 1111

Query: 504 SVLQHAANLGQKFNVLLLDLR---LKGTDASELISALHQ 611
+L+ Q ++++ +D + L G S+ I Q
Sbjct: 1112 EILER-----QHYDLIFMDFQMPILDGLRCSKTIREFEQ 1145


>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum
GN=ETR1 PE=2 SV=1
Length = 754

Score = 99.0 bits (245), Expect = 2e-20
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 25/228 (10%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSR---------------LEDIVELLFAVKDTG 137
L+QI +N++GN +KF+KEG E+ L +KDTG
Sbjct: 474 LMQILLNVVGNAVKFSKEGNVSISAFVAKSDSLRDPRAPEFFAVPSENHFYLRVQIKDTG 533

Query: 138 LGIPKDKQPILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGST 317
+GI P LF F+Q + GGTGLGL I + M+G +W+ES+G+ GST
Sbjct: 534 IGITPQDIPNLFSKFTQSQALATTNSGGTGLGLAICKRFVNLMEGHIWIESEGL-GKGST 592

Query: 318 FWFTAKFRLVPSSNTERFP----LPV------FKDVRGLVVDDNETNRRILVNLLKSWGM 467
F K + +N + P LP F+ ++ LV+D+N +R + LL G
Sbjct: 593 AIFIIKLGIPGRANESKLPFVTKLPANHTQMSFQGLKVLVMDENGVSRMVTKGLLTHLGC 652

Query: 468 KVQAEGSVEAALSVLQHAANLGQKFNVLLLDLRLKGTDASELISALHQ 611
V GS + L V+ H + V+++D+ ++G D E+ +H+
Sbjct: 653 DVTTVGSRDECLRVVTH------EHKVVIMDVSMQGIDCYEVAVVIHE 694


>sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=ETR1
PE=2 SV=1
Length = 738

Score = 98.2 bits (243), Expect = 4e-20
Identities = 73/236 (30%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKS---------------RLEDIVELLFAVKDTG 137
L+QI +N++GN +KF+KEG + E+ L VKDTG
Sbjct: 458 LMQILLNVVGNAVKFSKEGSVSISAVAAKSESLSDPRAPEFFPVQSENHFYLRVQVKDTG 517

Query: 138 LGIPKDKQPILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGST 317
GI P LF F+Q + + GGTGLGL IS + M+G +W+ES+G+ GST
Sbjct: 518 SGINPQDIPKLFCKFAQNQALATKSSGGTGLGLAISKRFVNLMEGHIWIESEGL-GKGST 576

Query: 318 FWFTAKFRLVPSSNTERFP----LP------VFKDVRGLVVDDNETNRRILVNLLKSWGM 467
F K + SN + P LP F+ ++ L++DDN +R + LL G
Sbjct: 577 AIFIVKLGIPGRSNEPKLPFMPRLPANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGC 636

Query: 468 KVQAEGSVEAALSVLQHAANLGQKFNVLLLDLRLKGTDASELISALHQEPALLENR 635
V S + L VL Q+ V+ +D+ + G D E+ +H++ NR
Sbjct: 637 DVTTVSSGDECLRVLT------QEHKVVFMDVSIPGIDCYEVAVQIHEKFGKHHNR 686


>sp|P48027|GACS_PSESY Sensor protein gacS OS=Pseudomonas syringae
pv. syringae GN=gacS PE=3 SV=1
Length = 907

Score = 97.1 bits (240), Expect = 8e-20
Identities = 66/197 (33%), Positives = 99/197 (50%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182
L QI NL+ N IKFT+EG + E+ +L +V+DTG+G+ LFQAF
Sbjct: 391 LRQILTNLVSNAIKFTREGTIVARAMLEDETEEHAQLRISVQDTGIGLSSQDVRALFQAF 450

Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362
SQ D+S R GGTGLGLVIS +L M G + V+S E GS FW + K
Sbjct: 451 SQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGE--GSEFWISLKLPKAREDKE 508

Query: 363 ERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANLGQKF 542
E +P+ +R V++ ++ R+ L + L+ G++ ++E L+ + A
Sbjct: 509 ESLNIPL-GGLRAAVLEHHDLARQALEHQLEDCGLQTIVFNNLENLLNGVTAAHE----- 562

Query: 543 NVLLLDLRLKGTDASEL 593
+DL + G A E+
Sbjct: 563 TPAAIDLAVLGVTALEI 579


>sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinase
barA OS=Shigella flexneri GN=barA PE=3 SV=1
Length = 918

Score = 94.4 bits (233), Expect = 5e-19
Identities = 57/157 (36%), Positives = 81/157 (51%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182
L QI NL+GN IKFT+ G ++ V++ ++DTG+GIP+ Q LFQAF
Sbjct: 409 LQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAF 468

Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362
Q D+S R +GGTGLGLVI+ KL M G + S + GSTFWF L P+
Sbjct: 469 RQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQ--PNRGSTFWFHINLDLNPNIII 526

Query: 363 ERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKV 473
E + R V+ N + +++L ++V
Sbjct: 527 EGPSIQCLAGKRLAYVEPNSAAAQCTLDILSETPLEV 563


>sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum
GN=ETR2 PE=2 SV=1
Length = 736

Score = 93.2 bits (230), Expect = 1e-18
Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 32/257 (12%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVE----------------LLFAVKDT 134
L+QI +N++GN +KF+KEG ++ E +++ L VKDT
Sbjct: 458 LMQILLNVVGNAVKFSKEGSVSVSAV-NAKSESLIDPRAPEFFPVQSENHFYLRVQVKDT 516

Query: 135 GLGIPKDKQPILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGS 314
G GI P LF F+Q + GTGLGL I + M+G +W+ES+G+ GS
Sbjct: 517 GSGINPQDFPKLFCKFAQNQEPATKNSAGTGLGLAICKRFVNLMEGHIWIESEGV-GKGS 575

Query: 315 TFWFTAKFRLVPSSNTERFP----LP------VFKDVRGLVVDDNETNRRILVNLLKSWG 464
T F K + N + P LP F+ ++ LV+DDN +R + +LL G
Sbjct: 576 TAIFIVKLGIPGRLNESKLPFTAGLPANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLG 635

Query: 465 MKVQAEGSVEAALSVLQHAANLGQKFNVLLLDLRLKGTDASELISALHQ------EPALL 626
V GS + L +L ++ VL++D + G + ++ ++H+ E L+
Sbjct: 636 CDVTTIGSGDECLRILT------REHKVLIMDASITGMNCYDVAVSVHEKFGKRLERPLI 689

Query: 627 ENRASETSWRNKENVLQ 677
T KEN L+
Sbjct: 690 VALTGNTDQVTKENCLR 706


>sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinase
barA OS=Escherichia coli (strain K12) GN=barA PE=1 SV=1
Length = 918

Score = 93.2 bits (230), Expect = 1e-18
Identities = 57/157 (36%), Positives = 80/157 (50%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182
L QI NL+GN IKFT+ G ++ V++ ++DTG+GIP+ Q LFQAF
Sbjct: 409 LQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAF 468

Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362
Q D+S R +GGTGLGLVI+ KL M G + S + GSTFWF L P+
Sbjct: 469 RQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQ--PNRGSTFWFHINLDLNPNIII 526

Query: 363 ERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKV 473
E R V+ N + +++L ++V
Sbjct: 527 EGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEV 563


tr_hit_id A9TN92
Definition tr|A9TN92|A9TN92_PHYPA Sensory histidine protein kinase OS=Physcomitrella patens subsp. patens
Align length 209
Score (bit) 225.0
E-value 2.0e-57
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950826|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_L19, 5'
(677 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TN92|A9TN92_PHYPA Sensory histidine protein kinase OS=Physc... 225 2e-57
tr|A9SKR6|A9SKR6_PHYPA Sensory histidine protein kinase (Fragmen... 168 3e-40
tr|B4CU67|B4CU67_9BACT Multi-sensor hybrid histidine kinase OS=C... 157 8e-37
tr|Q1Q3E7|Q1Q3E7_9BACT Sensor protein OS=Candidatus Kuenenia stu... 156 1e-36
tr|B0C7P6|B0C7P6_ACAM1 Sensor protein OS=Acaryochloris marina (s... 154 4e-36
tr|B4VIH4|B4VIH4_9CYAN PAS fold family OS=Microcoleus chthonopla... 152 1e-35
tr|A4BV91|A4BV91_9GAMM Sensor protein OS=Nitrococcus mobilis Nb-... 150 7e-35
tr|B0TG16|B0TG16_HELMI Sensor protein OS=Heliobacterium modestic... 150 9e-35
tr|Q4C3N3|Q4C3N3_CROWT Sensor protein OS=Crocosphaera watsonii G... 149 2e-34
tr|A3ISV2|A3ISV2_9CHRO Sensor protein (Fragment) OS=Cyanothece s... 146 1e-33
tr|B1WQ85|B1WQ85_CYAA5 Two-component hybrid sensor and regulator... 145 2e-33
tr|B7S1F5|B7S1F5_9GAMM Response regulator receiver domain protei... 145 2e-33
tr|A6C2E4|A6C2E4_9PLAN Sensor protein OS=Planctomyces maris DSM ... 145 2e-33
tr|B3EFL9|B3EFL9_CHLL2 Multi-sensor hybrid histidine kinase OS=C... 144 5e-33
tr|Q1NUH2|Q1NUH2_9DELT Sensor protein OS=delta proteobacterium M... 143 9e-33
tr|B4CUD1|B4CUD1_9BACT Integral membrane sensor hybrid histidine... 143 9e-33
tr|A6CBA6|A6CBA6_9PLAN Sensor protein OS=Planctomyces maris DSM ... 143 9e-33
tr|B4AX79|B4AX79_9CHRO Multi-sensor hybrid histidine kinase OS=C... 142 2e-32
tr|A4TYW8|A4TYW8_9PROT Sensor protein OS=Magnetospirillum gryphi... 142 2e-32
tr|B1ZZC2|B1ZZC2_OPITP Response regulator receiver sensor hybrid... 142 3e-32
tr|B1ZPP6|B1ZPP6_OPITP PAS/PAC sensor hybrid histidine kinase OS... 141 3e-32
tr|B7JUI6|B7JUI6_SYNP8 Hpt sensor hybrid histidine kinase OS=Syn... 141 3e-32
tr|Q2W680|Q2W680_MAGMM Sensor protein OS=Magnetospirillum magnet... 140 6e-32
tr|B4BZV3|B4BZV3_9CHRO Multi-sensor hybrid histidine kinase OS=C... 140 6e-32
tr|Q609M8|Q609M8_METCA Sensor protein OS=Methylococcus capsulatu... 140 7e-32
tr|Q7WZ30|Q7WZ30_METCA Sensor protein OS=Methylococcus capsulatu... 140 7e-32
tr|B4VZF4|B4VZF4_9CYAN PAS fold family OS=Microcoleus chthonopla... 140 1e-31
tr|Q1IJ91|Q1IJ91_ACIBL Sensor protein OS=Acidobacteria bacterium... 139 1e-31
tr|B4VND7|B4VND7_9CYAN PAS fold family OS=Microcoleus chthonopla... 139 1e-31
tr|B4VM91|B4VM91_9CYAN PAS fold family OS=Microcoleus chthonopla... 139 1e-31

>tr|A9TN92|A9TN92_PHYPA Sensory histidine protein kinase
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_196664 PE=4 SV=1
Length = 582

Score = 225 bits (573), Expect = 2e-57
Identities = 123/209 (58%), Positives = 147/209 (70%), Gaps = 1/209 (0%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182
L Q+FVNLIGN IKFT EGE KSR ED +ELLF+V+DTG+GIPK KQ +LFQAF
Sbjct: 49 LFQVFVNLIGNSIKFTAEGEVIVSAKVKSRNEDNIELLFSVRDTGIGIPKQKQSLLFQAF 108

Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSN- 359
SQVDSST RLYGGTGLGLVIS+KLA AM G MWVES+G GSTF FTA F + P+ +
Sbjct: 109 SQVDSSTTRLYGGTGLGLVISSKLAAAMGGTMWVESEG---KGSTFSFTANFHIPPACDL 165

Query: 360 TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANLGQK 539
+ K++ LVVDDN NR ILV++LK WGM + +E A LQ AA+ Q+
Sbjct: 166 PSSLNVESLKNMHVLVVDDNNVNRNILVDMLKVWGMISEGVDGIEPAKVALQKAADADQQ 225

Query: 540 FNVLLLDLRLKGTDASELISALHQEPALL 626
F VLLLD+ L G DASEL++ LH+ P LL
Sbjct: 226 FRVLLLDMWLHGKDASELVNFLHERPNLL 254


>tr|A9SKR6|A9SKR6_PHYPA Sensory histidine protein kinase (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_51178 PE=4 SV=1
Length = 330

Score = 168 bits (425), Expect = 3e-40
Identities = 92/147 (62%), Positives = 105/147 (71%), Gaps = 1/147 (0%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182
L Q+FVNLIGN IKFT EGE KSR D +ELLF+V+DTG+GIPK KQ +LFQAF
Sbjct: 122 LFQVFVNLIGNSIKFTAEGEVIVSAMVKSRNGDNIELLFSVRDTGIGIPKQKQSLLFQAF 181

Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSN- 359
SQVDSST RLYGGTGLGLVIS+KLA AM G MWVES+G GSTF FTA F + P+ +
Sbjct: 182 SQVDSSTTRLYGGTGLGLVISSKLAAAMGGTMWVESEG---KGSTFSFTANFHIPPACDL 238

Query: 360 TERFPLPVFKDVRGLVVDDNETNRRIL 440
+ KD+ LVVDDN NR IL
Sbjct: 239 PSSLNVESLKDMHVLVVDDNSVNRAIL 265


>tr|B4CU67|B4CU67_9BACT Multi-sensor hybrid histidine kinase
OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_0230
PE=4 SV=1
Length = 1248

Score = 157 bits (396), Expect = 8e-37
Identities = 88/211 (41%), Positives = 118/211 (55%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182
L Q+ NLIGN +KFT +GE + E + F+V DTG+GI + Q LFQ F
Sbjct: 716 LRQVLTNLIGNAVKFTDKGEVVVRANCQENAETHTTIRFSVTDTGIGISSEAQERLFQPF 775

Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362
Q D ST R +GGTGLGL I +L M G + V S+ GSTFWFTA+F
Sbjct: 776 VQADGSTTRRFGGTGLGLAICKQLVARMGGEIGVTSEA--GKGSTFWFTARFEKQAGGGM 833

Query: 363 ERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANLGQKF 542
KDVR + VDDN+TNR IL +LL +WGM+ Q S + ALS+LQ A G+ F
Sbjct: 834 AAPRPAKLKDVRVITVDDNDTNRAILHHLLSNWGMREQQAASGKQALSILQAEAGRGRMF 893

Query: 543 NVLLLDLRLKGTDASELISALHQEPALLENR 635
++ +LD+++ D EL A+ ++P R
Sbjct: 894 DLAILDMQMPEMDGLELARAMKKDPRFASAR 924


>tr|Q1Q3E7|Q1Q3E7_9BACT Sensor protein OS=Candidatus Kuenenia
stuttgartiensis GN=gacS PE=3 SV=1
Length = 967

Score = 156 bits (394), Expect = 1e-36
Identities = 92/209 (44%), Positives = 122/209 (58%), Gaps = 2/209 (0%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182
L QI NLIGN IKFT+ GE LLF V DTG+G+P++KQ I+F F
Sbjct: 443 LHQILTNLIGNAIKFTRTGEILLTGKRNKLPGKKGMLLFLVSDTGIGLPEEKQSIIFNIF 502

Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362
SQVDSST R YGGTGLGL I +L M G +WVES GSTF+FT F + P
Sbjct: 503 SQVDSSTTRQYGGTGLGLAICKRLVELMDGEIWVES--TPGKGSTFYFTVTFDVHPKPQE 560

Query: 363 ER-FPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKV-QAEGSVEAALSVLQHAANLGQ 536
++ PL + L++DDN TNR IL ++L W + V +AEG E ++ L+ A N G
Sbjct: 561 QKEIPLSGAEKPYVLIIDDNATNRMILRDMLHGWDIPVAEAEGG-ENGINELKRARNAGT 619

Query: 537 KFNVLLLDLRLKGTDASELISALHQEPAL 623
+N+LLLD R+ G D ++ ++ +P L
Sbjct: 620 PYNLLLLDCRMPGMDGFQIARSVKNDPEL 648


>tr|B0C7P6|B0C7P6_ACAM1 Sensor protein OS=Acaryochloris marina (strain
MBIC 11017) GN=AM1_0220 PE=4 SV=1
Length = 755

Score = 154 bits (390), Expect = 4e-36
Identities = 96/241 (39%), Positives = 135/241 (56%), Gaps = 21/241 (8%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLED--IVELLFAVKDTGLGIPKDKQPILFQ 176
L QI VNL+GN IKFT+ GE + D + EL FAV+DTG+GIP ++Q LF+
Sbjct: 352 LRQILVNLLGNAIKFTQSGEVVVNVSAEPFAADTPLYELSFAVRDTGMGIPAERQNRLFK 411

Query: 177 AFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSS 356
+FSQVDSST R +GGTGLGLVI +L+ M G +WVES+ E GSTF FT + +
Sbjct: 412 SFSQVDSSTTRKFGGTGLGLVICKRLSELMGGRIWVESE--EGQGSTFAFTIQAEETEDT 469

Query: 357 N--TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANL 530
+ P KD R L+VDDN+TN+R+L +SW MK Q S AL +L+HA
Sbjct: 470 TVLAQSLPAVTLKDKRVLLVDDNDTNQRVLTLQTESWKMKPQVAASGYEALGLLEHAG-- 527

Query: 531 GQKFNVLLLDLRLKGTDASEL-----------------ISALHQEPALLENRASETSWRN 659
F++ +LD+++ D L ++++ Q P L ++ ++W N
Sbjct: 528 --PFDIAILDMQMPEMDGLTLAQKIRSHPRGVNFPMVMLTSIGQAPDLAHHKGLFSAWLN 585

Query: 660 K 662
K
Sbjct: 586 K 586


>tr|B4VIH4|B4VIH4_9CYAN PAS fold family OS=Microcoleus chthonoplastes
PCC 7420 GN=MC7420_7722 PE=4 SV=1
Length = 1946

Score = 152 bits (385), Expect = 1e-35
Identities = 96/220 (43%), Positives = 124/220 (56%), Gaps = 15/220 (6%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXK-------------SRLEDIVELLFAVKDTGLG 143
L QI VNL+ N +KFT +GE K + E E+LFAVKDTG+G
Sbjct: 1372 LRQILVNLLSNALKFTHQGEVTVSVSSKRVSPQSLEQLSHRTNKEQQYEILFAVKDTGIG 1431

Query: 144 IPKDKQPILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFW 323
IP D+ LF+AFSQVDSST R YGGTGLGLVIS +L+ M G +WVES+ GS F+
Sbjct: 1432 IPPDRLDRLFKAFSQVDSSTSRHYGGTGLGLVISKRLSEMMGGRIWVESE--VGKGSIFY 1489

Query: 324 FTAKFRLVPSSNTERFPL--PVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEA 497
FT + N L P + R L+VDDN TNRRIL +SWG+ +A S E
Sbjct: 1490 FTIVAPVCHIDNLSNLDLRQPQLEGKRMLIVDDNATNRRILTLQGQSWGVLTRAAESGEQ 1549

Query: 498 ALSVLQHAANLGQKFNVLLLDLRLKGTDASELISALHQEP 617
AL LQ G+ F++ +LD+ + G D L S + ++P
Sbjct: 1550 ALDWLQQ----GETFDLAILDMHMPGMDGVNLASQIRRQP 1585


>tr|A4BV91|A4BV91_9GAMM Sensor protein OS=Nitrococcus mobilis Nb-231
GN=NB231_06785 PE=4 SV=1
Length = 715

Score = 150 bits (379), Expect = 7e-35
Identities = 89/209 (42%), Positives = 117/209 (55%), Gaps = 2/209 (0%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXKSRLEDIVELLFAVKDTGLGIPKDKQPILFQAF 182
L QI VNL+GN IKFT +GE +S + L F V DTG+GIP DK +F +F
Sbjct: 180 LRQIVVNLVGNAIKFTTQGEVVLDVAYESPTNNAANLHFTVTDTGIGIPTDKLESIFDSF 239

Query: 183 SQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSNT 362
Q D ST R +GGTGLGL IS++L M G +W ES+ GS F FT KF L
Sbjct: 240 EQADMSTTRQFGGTGLGLAISSRLVKLMGGRIWAESE--LGCGSDFHFTMKFSLAAERPA 297

Query: 363 ERFPL-PVFKD-VRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQHAANLGQ 536
E PL VF D VR L+VDDN TNR IL +L +WGM+ + +V L+ L+ A +
Sbjct: 298 EAQPLEAVFPDNVRALIVDDNATNRLILNEMLGNWGMQATSVAAVAEGLAALRTAYAARR 357

Query: 537 KFNVLLLDLRLKGTDASELISALHQEPAL 623
F +++ D + G D +L + Q+ L
Sbjct: 358 PFRLVITDCHMPGEDGFDLAEKIKQDGQL 386


>tr|B0TG16|B0TG16_HELMI Sensor protein OS=Heliobacterium modesticaldum
(strain ATCC 51547 / Ice1) GN=Helmi_02110 PE=3 SV=1
Length = 909

Score = 150 bits (378), Expect = 9e-35
Identities = 88/227 (38%), Positives = 127/227 (55%), Gaps = 2/227 (0%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXK-SRLEDIVELLFAVKDTGLGIPKDKQPILFQA 179
L QI +NL+GN +KFT+ GE + + + FAV DTG+GI DK+ ++F+
Sbjct: 505 LQQILINLMGNAVKFTERGEIVLQVERDPDQPGEAGAIRFAVSDTGIGIAADKKEVIFER 564

Query: 180 FSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRLVPSSN 359
FSQ DSST R YGGTGLGL IS L MKG +WVES+ GSTF+FTA+F
Sbjct: 565 FSQADSSTTRRYGGTGLGLTISRYLVEMMKGRIWVESE--LGKGSTFYFTARFGQADPIE 622

Query: 360 TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWG-MKVQAEGSVEAALSVLQHAANLGQ 536
P+ + +R L++DDNETNR IL +KSWG + V+A G E ++ ++ A G
Sbjct: 623 EMSLPVEALRGIRVLIIDDNETNRIILRETVKSWGVVPVEASGGAE-GIAEMKRAKAQGL 681

Query: 537 KFNVLLLDLRLKGTDASELISALHQEPALLENRASETSWRNKENVLQ 677
+ ++LLD R+ D ++ + E E + N+ + +Q
Sbjct: 682 PYQLVLLDCRMPEMDGFQVAERIQAEVEFCEATVLMVTSDNRNDDIQ 728


>tr|Q4C3N3|Q4C3N3_CROWT Sensor protein OS=Crocosphaera watsonii
GN=CwatDRAFT_3854 PE=4 SV=1
Length = 731

Score = 149 bits (376), Expect = 2e-34
Identities = 94/213 (44%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXX------KSRLEDIVELLFAVKDTGLGIPKDKQP 164
L QI NLIGN +KFT EGE + + EL FAVKDTG+GIPK++
Sbjct: 195 LKQILANLIGNAVKFTPEGEVVIYVSSTVIEGGEGEVNPNYELRFAVKDTGIGIPKERCH 254

Query: 165 ILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFRL 344
LFQ FSQVD+ST R YGGTGLGLVIS +L+ M G MWV S+ E GSTF FT + +
Sbjct: 255 RLFQPFSQVDASTTRQYGGTGLGLVISKRLSELMGGKMWVHSE--EGKGSTFNFTLRAKA 312

Query: 345 VPSSN--TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQH 518
SS+ T + R L++DDN T+++IL+N +SWGM A S E AL L+
Sbjct: 313 ATSSSPVTSQEGESELMGKRVLIIDDNLTSQKILINQAQSWGMFTCAVDSGEKALEWLKR 372

Query: 519 AANLGQKFNVLLLDLRLKGTDASELISALHQEP 617
G F+V +LD+ L + EL+ + ++P
Sbjct: 373 ----GITFDVAILDMNLPDMNGLELVREIRKQP 401


>tr|A3ISV2|A3ISV2_9CHRO Sensor protein (Fragment) OS=Cyanothece sp.
CCY 0110 GN=CY0110_28659 PE=3 SV=1
Length = 881

Score = 146 bits (369), Expect = 1e-33
Identities = 96/214 (44%), Positives = 118/214 (55%), Gaps = 9/214 (4%)
Frame = +3

Query: 3 LLQIFVNLIGNGIKFTKEGEXXXXXXXK-------SRLEDIVELLFAVKDTGLGIPKDKQ 161
L QI NLIGN +KFTK+GE S+ EL FAVKDTG+GIP D+
Sbjct: 354 LKQILANLIGNAVKFTKKGEVVIYVNATPIKSRQDSKQNSRYELRFAVKDTGIGIPSDRC 413

Query: 162 PILFQAFSQVDSSTQRLYGGTGLGLVISAKLATAMKGAMWVESDGIEDHGSTFWFTAKFR 341
LFQ FSQVD+ST R YGGTGLGL IS L+ M G MWV S E GSTF FT +
Sbjct: 414 NRLFQPFSQVDASTTRKYGGTGLGLAISKGLSELMGGNMWVHS--TEGKGSTFNFTIQTL 471

Query: 342 LVPSSN--TERFPLPVFKDVRGLVVDDNETNRRILVNLLKSWGMKVQAEGSVEAALSVLQ 515
PSS+ T + R L++DDN TN++IL N +SWGM A S E AL L+
Sbjct: 472 AAPSSSPATSQEGERELMGKRMLIIDDNLTNQKILTNQAQSWGMFTCAVDSGEKALEWLR 531

Query: 516 HAANLGQKFNVLLLDLRLKGTDASELISALHQEP 617
G F+V +LD+ + D L + Q+P
Sbjct: 532 R----GITFDVAILDMNMPNMDGVNLARQIRQQP 561