DK950832
Clone id TST38A01NGRL0009_M01
Library
Length 625
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_M01. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
GAATTGCGCGAGTTGCGAGGTCGCTCTTGCGCTAAGCGCGCAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGCTCCACATTTCCAGGGTTATTGATAGATACATAGACA
TTGACACATTGTCGTACCGCAGAGTCTTACAGAGTCTGCTGCTCTCTTATCTGCCTAGTG
GGCCTCTCGTTCAAGGAGCGAGGTACTCATTCGCGAATCAAGAAGTGCCCATTGCATATA
AAACACAGAGAAGCTGCACTGGGGTAGCTGATGGTGAGAACCCATATGGCATTTGTTGAT
TTAAAGTGGCAGGCATATGCATGCAGCTGTCCGTATAGAATATGCTGATGACATGTGAAG
CACATTGTTGACAGCCCCGCGCATACCCTCCGTCCTACCCCCCTTAAAAACGGGGGAGCC
ACTTCTCATGCGGGCGCCTCCATGGCAAGGCACTGTTTCCTGTATAGCATTTTTGATGAT
TCTAAACACAACTGAATGATTCTCAACACAGCTGCATGCTAAAGGTTTTCTGTTCAACAT
CTTCCTTTGGTTCCTCATTATGGCGGCTGCTGTATTTGCAACATCATTCCCCTGTTTCTT
CTCTAGCCCTCGTATTTACGAAAGC
■■Homology search results ■■ -
sp_hit_id Q13761
Definition sp|Q13761|RUNX3_HUMAN Runt-related transcription factor 3 OS=Homo sapiens
Align length 48
Score (bit) 35.0
E-value 0.31
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950832|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_M01, 5'
(625 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q13761|RUNX3_HUMAN Runt-related transcription factor 3 OS=Hom... 35 0.31
sp|Q64131|RUNX3_MOUSE Runt-related transcription factor 3 OS=Mus... 32 2.7
sp|Q6FXQ5|GPI14_CANGA GPI mannosyltransferase 1 OS=Candida glabr... 31 5.9
sp|Q8TER0|SNED1_HUMAN Sushi, nidogen and EGF-like domain-contain... 30 7.7
sp|O16025|AOSL_PLEHO Allene oxide synthase-lipoxygenase protein ... 30 7.7

>sp|Q13761|RUNX3_HUMAN Runt-related transcription factor 3 OS=Homo
sapiens GN=RUNX3 PE=1 SV=2
Length = 415

Score = 35.0 bits (79), Expect = 0.31
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1

Query: 337 YTDSCMHMPATLNQQMPYGFSPSATPVQLLCVLYAMGTS*FANEYLAP 194
+ D MH P ++ PY +PS T + L V TS F + YL P
Sbjct: 263 FPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPP 310


>sp|Q64131|RUNX3_MOUSE Runt-related transcription factor 3 OS=Mus
musculus GN=Runx3 PE=2 SV=2
Length = 409

Score = 32.0 bits (71), Expect = 2.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1

Query: 337 YTDSCMHMPATLNQQMPYGFSPSATPVQLLCVLYAMGTS*FANEYLAP 194
+ D MH P ++ PY +PS T + L V +S F + YL P
Sbjct: 261 FPDPRMHYPGAMSAAFPYSATPSGTSLGSLSVAGMPASSRFHHTYLPP 308


>sp|Q6FXQ5|GPI14_CANGA GPI mannosyltransferase 1 OS=Candida glabrata
GN=GPI14 PE=3 SV=1
Length = 431

Score = 30.8 bits (68), Expect = 5.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3

Query: 362 CFTCHQHILYGQLHAYACHFKSTNAIWVLTISYPSAAS 249
CF C Q++L G L + HFK I+ L I+ AA+
Sbjct: 153 CFLCEQYLLGGLLFGLSIHFKIYPIIYALPIAIYVAAA 190


>sp|Q8TER0|SNED1_HUMAN Sushi, nidogen and EGF-like domain-containing
protein 1 OS=Homo sapiens GN=SNED1 PE=1 SV=2
Length = 1413

Score = 30.4 bits (67), Expect = 7.7
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1

Query: 313 AYACSCPYRIC**HVKHIVDSPAHTLRPTPLKNGGATSHAGASMARHC 456
+Y C CP H KH + H P +NGG AG HC
Sbjct: 562 SYTCECPRGF---HGKHCEKARPHLCSSGPCRNGGTCKEAGGEY--HC 604


>sp|O16025|AOSL_PLEHO Allene oxide synthase-lipoxygenase protein
OS=Plexaura homomalla PE=1 SV=1
Length = 1066

Score = 30.4 bits (67), Expect = 7.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1

Query: 370 QQCASHVISIFYTDSCMHMPATLNQQMPYGFSPSATPV 257
+Q + S+ +T SC H +Q+ YGF+P+A V
Sbjct: 926 EQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAV 963


tr_hit_id B4DVE5
Definition tr|B4DVE5|B4DVE5_HUMAN cDNA FLJ56502, highly similar to Runt-related transcription factor 3 OS=Homo sapiens
Align length 48
Score (bit) 35.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950832|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_M01, 5'
(625 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4DVE5|B4DVE5_HUMAN cDNA FLJ56502, highly similar to Runt-rel... 35 3.7
tr|B1AJV5|B1AJV5_HUMAN Runt-related transcription factor 3 OS=Ho... 35 3.7
tr|B4M236|B4M236_DROVI GJ18731 OS=Drosophila virilis GN=GJ18731 ... 35 4.8
tr|B4JIR2|B4JIR2_DROGR GH11820 OS=Drosophila grimshawi GN=GH1182... 35 4.8
tr|B4N1P6|B4N1P6_DROWI GK16256 OS=Drosophila willistoni GN=GK162... 34 6.2
tr|B4DT53|B4DT53_HUMAN cDNA FLJ52905, highly similar to Runt-rel... 34 8.1

>tr|B4DVE5|B4DVE5_HUMAN cDNA FLJ56502, highly similar to
Runt-related transcription factor 3 OS=Homo sapiens PE=2
SV=1
Length = 362

Score = 35.0 bits (79), Expect = 3.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1

Query: 337 YTDSCMHMPATLNQQMPYGFSPSATPVQLLCVLYAMGTS*FANEYLAP 194
+ D MH P ++ PY +PS T + L V TS F + YL P
Sbjct: 210 FPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPP 257


>tr|B1AJV5|B1AJV5_HUMAN Runt-related transcription factor 3 OS=Homo
sapiens GN=RUNX3 PE=2 SV=1
Length = 429

Score = 35.0 bits (79), Expect = 3.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1

Query: 337 YTDSCMHMPATLNQQMPYGFSPSATPVQLLCVLYAMGTS*FANEYLAP 194
+ D MH P ++ PY +PS T + L V TS F + YL P
Sbjct: 277 FPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPP 324


>tr|B4M236|B4M236_DROVI GJ18731 OS=Drosophila virilis GN=GJ18731
PE=4 SV=1
Length = 1967

Score = 34.7 bits (78), Expect = 4.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2

Query: 594 QGNDVANTAAAIMRNQRKMLNRKPLACS 511
QGN AN A A ++N +KML ++P +CS
Sbjct: 460 QGNQQANAAVAALQNYQKMLRQRPASCS 487


>tr|B4JIR2|B4JIR2_DROGR GH11820 OS=Drosophila grimshawi GN=GH11820
PE=4 SV=1
Length = 2070

Score = 34.7 bits (78), Expect = 4.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2

Query: 594 QGNDVANTAAAIMRNQRKMLNRKPLACS 511
QGN AN A A ++N +KML ++P +CS
Sbjct: 459 QGNQQANAAVAALQNYQKMLRQRPASCS 486


>tr|B4N1P6|B4N1P6_DROWI GK16256 OS=Drosophila willistoni GN=GK16256
PE=4 SV=1
Length = 1931

Score = 34.3 bits (77), Expect = 6.2
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2

Query: 594 QGNDVANTAAAIMRNQRKMLNRKPLACS 511
QGN AN A A ++N +KML +P +CS
Sbjct: 459 QGNQQANAAVAALQNYQKMLRERPASCS 486


>tr|B4DT53|B4DT53_HUMAN cDNA FLJ52905, highly similar to
Runt-related transcription factor 3 OS=Homo sapiens PE=2
SV=1
Length = 322

Score = 33.9 bits (76), Expect = 8.1
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1

Query: 337 YTDSCMHMPATLNQQMPYGFSPSATPVQLLCVLYAMGTS*FANEYLAP 194
+ D MH P ++ PY +PS T L V TS F + YL P
Sbjct: 170 FPDPRMHYPGAMSAAFPYSATPSGTSTSSLSVAGMPATSRFHHTYLPP 217