BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950841|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_M10, 5'
         (581 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5SPP5|EFR3B_DANRE Protein EFR3 homolog B OS=Danio rerio GN=e...    33   0.79 
sp|P57458|IF2_BUCAI Translation initiation factor IF-2 OS=Buchne...    32   1.8  

>sp|Q5SPP5|EFR3B_DANRE Protein EFR3 homolog B OS=Danio rerio
           GN=efr3b PE=3 SV=2
          Length = 816

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +3

Query: 342 SMRRFVESIIESSRMLINMSPSHMH*LVASLFVKGCRAGESTPREHSFREAACSHYFERC 521
           S+  FVES ++  R L+     ++  L  + FVK     E TP  H   +   S + E C
Sbjct: 91  SINLFVESFLKMVRKLLEADKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMC 150

Query: 522 *SG 530
            SG
Sbjct: 151 HSG 153


>sp|P57458|IF2_BUCAI Translation initiation factor IF-2 OS=Buchnera
           aphidicola subsp. Acyrthosiphon pisum GN=infB PE=3 SV=1
          Length = 864

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 24/73 (32%), Positives = 35/73 (47%)
 Frame = -2

Query: 475 SLGVLSPALQPLTKRDATS*CM*LGDMLINILELSMMLSTNLLILTFNLAVDLLCN*ISH 296
           SL  +S AL  L+  +     + LG   I   + S+ L++N +IL FN+  D     I +
Sbjct: 675 SLEAISGALLKLSTEEVKIKIIGLGIGGITETDASLALASNAIILGFNVRADTSAKKIIN 734

Query: 295 HPHLDRVYLFNIY 257
             HLD  Y   IY
Sbjct: 735 SEHLDLRYYSVIY 747

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950841|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_M10, 5'
         (581 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4RD19|Q4RD19_TETNG Chromosome undetermined SCAF17588, whole ...    39   0.27 
tr|Q5SPF3|Q5SPF3_DANRE Novel protein (Fragment) OS=Danio rerio G...    33   8.8  
tr|B0S672|B0S672_DANRE Novel protein (Fragment) OS=Danio rerio G...    33   8.8  
tr|A8FVG5|A8FVG5_SHESH GGDEF domain protein OS=Shewanella sedimi...    33   8.8  

>tr|Q4RD19|Q4RD19_TETNG Chromosome undetermined SCAF17588, whole
           genome shotgun sequence. (Fragment) OS=Tetraodon
           nigroviridis GN=GSTENG00037163001 PE=4 SV=1
          Length = 166

 Score = 38.5 bits (88), Expect = 0.27
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = +3

Query: 342 SMRRFVESIIESSRMLINMSPSHMH*LVASLFVKGCRAGESTPREHSFREAACSHYFERC 521
           S+   VES + + R+L+     H+H L  S FVK     E TP  H   +   S + E C
Sbjct: 64  SINLLVESFLSTLRLLLEADKPHLHILATSSFVKFANIEEDTPSYHRSYDFFVSRFSEMC 123


>tr|Q5SPF3|Q5SPF3_DANRE Novel protein (Fragment) OS=Danio rerio
           GN=si:ch211-203k16.1 PE=4 SV=1
          Length = 636

 Score = 33.5 bits (75), Expect = 8.8
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +3

Query: 342 SMRRFVESIIESSRMLINMSPSHMH*LVASLFVKGCRAGESTPREHSFREAACSHYFERC 521
           S+  FVES ++  R L+     ++  L  + FVK     E TP  H   +   S + E C
Sbjct: 88  SINLFVESFLKMVRKLLEADKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMC 147

Query: 522 *SG 530
            SG
Sbjct: 148 HSG 150


>tr|B0S672|B0S672_DANRE Novel protein (Fragment) OS=Danio rerio
           GN=DKEYP-70E6.6-001 PE=4 SV=1
          Length = 813

 Score = 33.5 bits (75), Expect = 8.8
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +3

Query: 342 SMRRFVESIIESSRMLINMSPSHMH*LVASLFVKGCRAGESTPREHSFREAACSHYFERC 521
           S+  FVES ++  R L+     ++  L  + FVK     E TP  H   +   S + E C
Sbjct: 88  SINLFVESFLKMVRKLLEADKPNLQILGTNSFVKFANIEEDTPSYHRSYDFFVSRFSEMC 147

Query: 522 *SG 530
            SG
Sbjct: 148 HSG 150


>tr|A8FVG5|A8FVG5_SHESH GGDEF domain protein OS=Shewanella sediminis
           (strain HAW-EB3) GN=Ssed_2229 PE=3 SV=1
          Length = 467

 Score = 33.5 bits (75), Expect = 8.8
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +3

Query: 102 LVVREASVLQGEPEACVEFSSFGNTQVCIH*SLHLSMVLN*RYPSNECASYLYILNR 272
           L V++A+ L  + +ACV  + F   QVC H S+ L  V    Y +     + Y++N+
Sbjct: 394 LTVKQANTLSKKVQACVSAAQFEKDQVCHHVSVSLGSV----YCTTAMVDHQYLINQ 446