DK950854 |
Clone id |
TST38A01NGRL0009_M23 |
Library |
TST38 |
Length |
593 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_M23. 5' end sequence. |
Accession |
DK950854 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
AGTTTTTTGCCTGCTCGTCGAAGCGTGAGCGAACATGTCGTGGACGAGCAAACTGAAGCC TGCTGTAAGGGAGCTTCTTTTTCACTTCTGTCAAACATCCTCTTCCAGTGCTCCCGCCCG GCAGTTTGTACAACGAATCTACAAGGACTTGAAGACTGCAAATCCTGAACTTCCGATTCT CATACGAGAATGTAGTGGTATGCAACCTCGGATGTGGGCACGCTATGAGTTTGGTGAGGA GAAGAGTGTGCCTTTAGATGGATTGACAGAGAAGCAGATTGATGGCAAGCTGCAGGAATT GGTTGGACTACAGCTGAAGTGATGCTAGCTCCAACCCTAAGTAAGCCCTCCTGTGCTGAA TCTTTTTTTTTTTCCCCCCCCCCTACCTTAGAGTCTGGTCAGAAATAAAAAAGGGGGGGG GAAATGGGAGAGAGGGTGGCTTTGTCAATTTTGCCTTGGCTGAATTTGAATATCCTTGTA CTCCATTCATCAGAGCTCAAAACACCCATGAATGTACTCATCGTGCATCCGTTTACAAAT CATTGGAGTTCAAAAGGGTTCTTTTTTTTTCTAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5R5Z4 |
Definition |
sp|Q5R5Z4|NDUA2_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii |
Align length |
83 |
Score (bit) |
92.0 |
E-value |
2.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q01KV8 |
Definition |
tr|Q01KV8|Q01KV8_ORYSA H0211A12.16 protein OS=Oryza sativa |
Align length |
89 |
Score (bit) |
117.0 |
E-value |
5.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950854|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_M23, 5' (572 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q01KV8|Q01KV8_ORYSA H0211A12.16 protein OS=Oryza sativa GN=H0... 117 5e-25 tr|B8AS84|B8AS84_ORYSI Putative uncharacterized protein OS=Oryza... 117 5e-25 tr|B7E914|B7E914_ORYSJ cDNA clone:001-121-D06, full insert seque... 117 5e-25 tr|B6TDN0|B6TDN0_MAIZE NADH-ubiquinone oxidoreductase 10.5 kDa s... 114 5e-24 tr|A9NSY8|A9NSY8_PICSI Putative uncharacterized protein OS=Picea... 112 1e-23 tr|B6TLX0|B6TLX0_MAIZE NADH-ubiquinone oxidoreductase 10.5 kDa s... 109 9e-23 tr|Q9FIJ2|Q9FIJ2_ARATH NADH dehydrogenase 10.5K chain-like prote... 109 1e-22 tr|A9PE63|A9PE63_POPTR Putative uncharacterized protein OS=Popul... 108 2e-22 tr|A9PIT1|A9PIT1_POPJC Putative uncharacterized protein OS=Popul... 107 5e-22 tr|A9P8N8|A9P8N8_POPTR Putative uncharacterized protein OS=Popul... 107 5e-22 tr|B5FZL8|B5FZL8_TAEGU Putative NADH dehydrogenase 1 alpha subco... 99 2e-19 tr|Q4T469|Q4T469_TETNG Chromosome undetermined SCAF9792, whole g... 97 6e-19 tr|A4IH72|A4IH72_XENTR LOC100124807 protein OS=Xenopus tropicali... 97 8e-19 tr|B5XD35|B5XD35_SALSA NADH dehydrogenase 1 alpha subcomplex sub... 96 1e-18 tr|B5FZM2|B5FZM2_TAEGU Putative NADH dehydrogenase 1 alpha subco... 96 2e-18 tr|B8NG14|B8NG14_ASPFL NADH-ubiquinone oxidoreductase 105 kDa su... 96 2e-18 tr|Q7QKY1|Q7QKY1_ANOGA AGAP012823-PA (Fragment) OS=Anopheles gam... 94 4e-18 tr|Q7Q997|Q7Q997_ANOGA AGAP003367-PA OS=Anopheles gambiae GN=AGA... 94 4e-18 tr|Q2F672|Q2F672_BOMMO NADH-ubiquinone oxidoreductase B8 subunit... 93 9e-18 tr|B5X9B6|B5X9B6_SALSA NADH dehydrogenase 1 alpha subcomplex sub... 93 1e-17 tr|Q4R962|Q4R962_MACFA Testis cDNA clone: QtsA-10650, similar to... 91 3e-17 tr|Q17GH9|Q17GH9_AEDAE NADH dehydrogenase, putative OS=Aedes aeg... 91 3e-17 tr|B0WUY1|B0WUY1_CULQU NADH-ubiquinone oxidoreductase B8 subunit... 91 3e-17 tr|Q4VBI5|Q4VBI5_DANRE Zgc:112340 OS=Danio rerio GN=zgc:112340 P... 91 5e-17 tr|Q0MQ93|Q0MQ93_PONPY Mitochondrial complex I subunit NDUFA2 OS... 91 5e-17 tr|B6LEM3|B6LEM3_BRAFL Putative uncharacterized protein OS=Branc... 91 5e-17 tr|A7RVP0|A7RVP0_NEMVE Predicted protein OS=Nematostella vectens... 91 5e-17 tr|B8M4M0|B8M4M0_9EURO NADH-ubiquinone oxidoreductase 105 kDa su... 91 6e-17 tr|Q4PM50|Q4PM50_IXOSC NADH dehydrogenase, putative OS=Ixodes sc... 90 8e-17 tr|Q7XNR1|Q7XNR1_ORYSJ OSJNBa0033H08.7 protein (Putative unchara... 89 1e-16
>tr|Q01KV8|Q01KV8_ORYSA H0211A12.16 protein OS=Oryza sativa GN=H0211A12.16 PE=4 SV=1 Length = 99
Score = 117 bits (293), Expect = 5e-25 Identities = 52/89 (58%), Positives = 70/89 (78%) Frame = +2
Query: 35 MSWTSKLKPAVRELLFHFCQTSSSSAPARQFVQRIYKDLKTANPELPILIRECSGMQPRM 214 M+W + L V+E+ F FCQ+S +SAPAR+FV++ Y D+K NP LP+LIRECSG++P++ Sbjct: 1 MAWRANLSRGVKEIRFLFCQSSPASAPAREFVKKNYGDIKARNPSLPVLIRECSGVEPQL 60
Query: 215 WARYEFGEEKSVPLDGLTEKQIDGKLQEL 301 WARY+ G E+ V LDGLTE QID KL+EL Sbjct: 61 WARYDMGVERCVRLDGLTEAQIDSKLEEL 89
>tr|B8AS84|B8AS84_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_15333 PE=4 SV=1 Length = 99
Score = 117 bits (293), Expect = 5e-25 Identities = 52/89 (58%), Positives = 70/89 (78%) Frame = +2
Query: 35 MSWTSKLKPAVRELLFHFCQTSSSSAPARQFVQRIYKDLKTANPELPILIRECSGMQPRM 214 M+W + L V+E+ F FCQ+S +SAPAR+FV++ Y D+K NP LP+LIRECSG++P++ Sbjct: 1 MAWRANLSRGVKEIRFLFCQSSPASAPAREFVKKNYGDIKARNPSLPVLIRECSGVEPQL 60
Query: 215 WARYEFGEEKSVPLDGLTEKQIDGKLQEL 301 WARY+ G E+ V LDGLTE QID KL+EL Sbjct: 61 WARYDMGVERCVRLDGLTEAQIDSKLEEL 89
>tr|B7E914|B7E914_ORYSJ cDNA clone:001-121-D06, full insert sequence OS=Oryza sativa subsp. japonica PE=4 SV=1 Length = 99
Score = 117 bits (293), Expect = 5e-25 Identities = 52/89 (58%), Positives = 70/89 (78%) Frame = +2
Query: 35 MSWTSKLKPAVRELLFHFCQTSSSSAPARQFVQRIYKDLKTANPELPILIRECSGMQPRM 214 M+W + L V+E+ F FCQ+S +SAPAR+FV++ Y D+K NP LP+LIRECSG++P++ Sbjct: 1 MAWRANLSRGVKEIRFLFCQSSPASAPAREFVKKNYGDIKARNPSLPVLIRECSGVEPQL 60
Query: 215 WARYEFGEEKSVPLDGLTEKQIDGKLQEL 301 WARY+ G E+ V LDGLTE QID KL+EL Sbjct: 61 WARYDMGVERCVRLDGLTEAQIDSKLEEL 89
>tr|B6TDN0|B6TDN0_MAIZE NADH-ubiquinone oxidoreductase 10.5 kDa subunit OS=Zea mays PE=4 SV=1 Length = 99
Score = 114 bits (284), Expect = 5e-24 Identities = 51/89 (57%), Positives = 69/89 (77%) Frame = +2
Query: 35 MSWTSKLKPAVRELLFHFCQTSSSSAPARQFVQRIYKDLKTANPELPILIRECSGMQPRM 214 M+W + L +V+E+ FCQ+S +SAPAR+FV++ Y D+K NP LP L+RECSG+QP++ Sbjct: 1 MAWRASLSRSVKEIRVLFCQSSPASAPAREFVKKNYGDIKARNPSLPFLVRECSGVQPQL 60
Query: 215 WARYEFGEEKSVPLDGLTEKQIDGKLQEL 301 WARY+ G E+ V LDGLTE QID KL+EL Sbjct: 61 WARYDMGVERCVNLDGLTEAQIDKKLEEL 89
>tr|A9NSY8|A9NSY8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 102
Score = 112 bits (281), Expect = 1e-23 Identities = 53/90 (58%), Positives = 66/90 (73%) Frame = +2
Query: 35 MSWTSKLKPAVRELLFHFCQTSSSSAPARQFVQRIYKDLKTANPELPILIRECSGMQPRM 214 M+W ++L ++EL H CQTS SSA R F+ Y DLKT NP PILIRECSG++PR+ Sbjct: 1 MAWRAQLSRYLKELRIHLCQTSPSSASTRDFILSNYTDLKTLNPSFPILIRECSGIEPRI 60
Query: 215 WARYEFGEEKSVPLDGLTEKQIDGKLQELV 304 WARY++G EKSV LDGLT QI K++ELV Sbjct: 61 WARYQYGVEKSVALDGLTADQITEKVKELV 90
>tr|B6TLX0|B6TLX0_MAIZE NADH-ubiquinone oxidoreductase 10.5 kDa subunit OS=Zea mays PE=4 SV=1 Length = 99
Score = 109 bits (273), Expect = 9e-23 Identities = 49/89 (55%), Positives = 68/89 (76%) Frame = +2
Query: 35 MSWTSKLKPAVRELLFHFCQTSSSSAPARQFVQRIYKDLKTANPELPILIRECSGMQPRM 214 M+W + L +++E+ FCQ+S +SA AR+FV++ Y D+K NP LP L+RECSG+QP++ Sbjct: 1 MAWRASLSRSLKEIRVLFCQSSPASAAAREFVKKNYGDIKARNPSLPFLVRECSGVQPQL 60
Query: 215 WARYEFGEEKSVPLDGLTEKQIDGKLQEL 301 WARY+ G E+ V LDGLTE QID KL+EL Sbjct: 61 WARYDMGVERCVNLDGLTEAQIDKKLEEL 89
>tr|Q9FIJ2|Q9FIJ2_ARATH NADH dehydrogenase 10.5K chain-like protein OS=Arabidopsis thaliana GN=At5g47890 PE=2 SV=1 Length = 97
Score = 109 bits (272), Expect = 1e-22 Identities = 51/90 (56%), Positives = 67/90 (74%) Frame = +2
Query: 35 MSWTSKLKPAVRELLFHFCQTSSSSAPARQFVQRIYKDLKTANPELPILIRECSGMQPRM 214 M+W + +++EL CQ+S +SAP R FV++ YKDLK+ NP+LPILIRECSG+QP+M Sbjct: 1 MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60
Query: 215 WARYEFGEEKSVPLDGLTEKQIDGKLQELV 304 WARY+ G E+ V LDGLTE QI L+ LV Sbjct: 61 WARYDMGVERCVNLDGLTEPQILKALENLV 90
>tr|A9PE63|A9PE63_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 98
Score = 108 bits (271), Expect = 2e-22 Identities = 52/97 (53%), Positives = 71/97 (73%), Gaps = 2/97 (2%) Frame = +2
Query: 35 MSWTSKLKPAVRELLFHFCQTSSSSAPARQFVQRIYKDLKTANPELPILIRECSGMQPRM 214 M+W +L ++EL CQ+S SS+ R F++R YKDLKT NP+LPILIREC+G++P++ Sbjct: 1 MAWRGQLSKNLKELRILLCQSSPSSSTTRTFIERSYKDLKTLNPKLPILIRECNGIEPQL 60
Query: 215 WARYEFGEEKSVPLDGLTEKQIDGKLQEL--VGLQLK 319 WARY+FG E+ V L+GL+E QI L+EL VG LK Sbjct: 61 WARYDFGVERGVRLEGLSEAQISKALEELGKVGASLK 97
>tr|A9PIT1|A9PIT1_POPJC Putative uncharacterized protein OS=Populus jackii PE=4 SV=1 Length = 98
Score = 107 bits (267), Expect = 5e-22 Identities = 51/97 (52%), Positives = 71/97 (73%), Gaps = 2/97 (2%) Frame = +2
Query: 35 MSWTSKLKPAVRELLFHFCQTSSSSAPARQFVQRIYKDLKTANPELPILIRECSGMQPRM 214 M+W +L ++EL CQ+S SS+ R F+++ YKDLKT NP+LPILIREC+G++P++ Sbjct: 1 MAWRGQLSKNLKELRILLCQSSPSSSSTRTFIEKNYKDLKTLNPKLPILIRECNGIEPQL 60
Query: 215 WARYEFGEEKSVPLDGLTEKQIDGKLQEL--VGLQLK 319 WARY+FG E+ V L+GL+E QI L+EL VG LK Sbjct: 61 WARYDFGVERGVRLEGLSEAQISKALEELGKVGASLK 97
>tr|A9P8N8|A9P8N8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 98
Score = 107 bits (267), Expect = 5e-22 Identities = 51/97 (52%), Positives = 71/97 (73%), Gaps = 2/97 (2%) Frame = +2
Query: 35 MSWTSKLKPAVRELLFHFCQTSSSSAPARQFVQRIYKDLKTANPELPILIRECSGMQPRM 214 M+W +L ++EL CQ+S SS+ R F+++ YKDLKT NP+LPILIREC+G++P++ Sbjct: 1 MAWRGQLSKNLKELRILLCQSSPSSSSTRTFIEKNYKDLKTLNPKLPILIRECNGIEPQL 60
Query: 215 WARYEFGEEKSVPLDGLTEKQIDGKLQEL--VGLQLK 319 WARY+FG E+ V L+GL+E QI L+EL VG LK Sbjct: 61 WARYDFGVERGVRLEGLSEAQISKALEELGKVGASLK 97
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