DK950855
Clone id TST38A01NGRL0009_M24
Library
Length 665
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_M24. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
TTAGTGCTTATTTGCTTCTTGAGAGGAAAACCCTCTGGACTCTGGAGTGTGCGTTTTGTG
GGCGATGGAAAACTGTCCCAGAACTCGAAGTGATAGGGAGAGTCGTCTGCCAATGAGAGT
ATGAGAGCGGGGGTCTTGAAAAAGAAAGCAGATTTGTAGCGTGTGTGTGCGTGAGAGAGA
GAGAGATAGATAGAGAGAGAGAGAGAGAGAGCGAGTCGAGAGGTACTCGGGTGTGTGTGT
ACCACCTCCCTCCATAACGGCTGTTGCTTTCTTTCTTTTCCACAACAAGCAGGATGCCCG
GAGAAGGAACAGATTGATGTGCTATCTGCTTTGAGCACCTCGCTTCTTGATGGCATGCTT
TTATGGCTCCTGCTCATATCTGCCATACAAGTGGGCGCTCTGATACTTATCCACTTTAAA
GATTTATAGCGAGATTACTCTTTCTCTCTTTCTCTCTGTCTGTCATCTTGAGGGCTTTTC
TTGATTACACGCAGAATGCTTATTTGCTAACTTGTATTTGAAAGAGGATATGGCAGTTTG
CTGGTTTTTCCCCGCACCGAGGCTGACTGCCCGTCCATGAGATTCTCTCAGTCTCCTGTA
CATTTTGCTGGATAGCAATCTTCCATTGGAACACTGTGGGAAGCAGTGCCTTTTGAGCAC
TCCAC
■■Homology search results ■■ -
sp_hit_id O70514
Definition sp|O70514|FGFP1_MOUSE Fibroblast growth factor-binding protein 1 OS=Mus musculus
Align length 61
Score (bit) 35.0
E-value 0.36
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950855|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_M24, 5'
(665 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O70514|FGFP1_MOUSE Fibroblast growth factor-binding protein 1... 35 0.36
sp|Q9QY10|FGFP1_RAT Fibroblast growth factor-binding protein 1 O... 34 0.79
sp|P06447|L_SENDZ Large structural protein OS=Sendai virus (stra... 31 6.7
sp|O55528|L_SENDO Large structural protein OS=Sendai virus (stra... 31 6.7
sp|Q06996|L_SENDF Large structural protein OS=Sendai virus (stra... 31 6.7
sp|P06829|L_SENDE Large structural protein OS=Sendai virus (stra... 31 6.7
sp|Q9DUD8|L_SENDA Large structural protein OS=Sendai virus (stra... 31 6.7
sp|Q9MZ06|FGFP1_BOVIN Fibroblast growth factor-binding protein 1... 31 6.7
sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens GN... 30 8.8

>sp|O70514|FGFP1_MOUSE Fibroblast growth factor-binding protein 1
OS=Mus musculus GN=Fgfbp1 PE=1 SV=1
Length = 251

Score = 35.0 bits (79), Expect = 0.36
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -1

Query: 416 KWISIRAPTCMADMSRSHKSMPSRSEVLKADSTSICSFSGHPACCGKERKQQPLWREVVH 237
K+++ TC ++ + + + + +AD C F+G P C K K Q W++V
Sbjct: 65 KFVTKDQATCRWAVTEEEQGISLKVQCTQADQEFSCVFAGDPTDCLKHDKDQIYWKQVAR 124

Query: 236 T 234
T
Sbjct: 125 T 125


>sp|Q9QY10|FGFP1_RAT Fibroblast growth factor-binding protein 1
OS=Rattus norvegicus GN=Fgfbp1 PE=1 SV=1
Length = 238

Score = 33.9 bits (76), Expect = 0.79
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = -1

Query: 461 RQREREKE*SRYKSLKWISIRAPTCMADMSRSHKSMPSRSEVLKADSTSICSFSGHPACC 282
R ++R + ++++ TC ++ + + + +AD C F+G P C
Sbjct: 47 RNKQRSRTSKSMTHGRFVTKDQATCRWAVTEEELGINLKVQCTRADQEFSCVFAGDPTGC 106

Query: 281 GKERKQQPLWREVVHT 234
K K Q W++V T
Sbjct: 107 LKYDKDQTYWKQVART 122


>sp|P06447|L_SENDZ Large structural protein OS=Sendai virus (strain Z)
GN=L PE=1 SV=1
Length = 2228

Score = 30.8 bits (68), Expect = 6.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1

Query: 250 LHNGCCFLSFPQQAGCPEKEQIDV 321
L+NGCC + PQ+A P + +D+
Sbjct: 1367 LNNGCCIMESPQEANIPPRSTLDL 1390


>sp|O55528|L_SENDO Large structural protein OS=Sendai virus (strain
Ohita) GN=L PE=3 SV=1
Length = 2228

Score = 30.8 bits (68), Expect = 6.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1

Query: 250 LHNGCCFLSFPQQAGCPEKEQIDV 321
L+NGCC + PQ+A P + +D+
Sbjct: 1367 LNNGCCIMESPQEANIPPRSTLDL 1390


>sp|Q06996|L_SENDF Large structural protein OS=Sendai virus (strain
Fushimi) GN=L PE=3 SV=1
Length = 2228

Score = 30.8 bits (68), Expect = 6.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1

Query: 250 LHNGCCFLSFPQQAGCPEKEQIDV 321
L+NGCC + PQ+A P + +D+
Sbjct: 1367 LNNGCCIMESPQEANIPPRSTLDL 1390


>sp|P06829|L_SENDE Large structural protein OS=Sendai virus (strain
Enders) GN=L PE=3 SV=2
Length = 2228

Score = 30.8 bits (68), Expect = 6.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1

Query: 250 LHNGCCFLSFPQQAGCPEKEQIDV 321
L+NGCC + PQ+A P + +D+
Sbjct: 1367 LNNGCCIMESPQEANIPPRSTLDL 1390


>sp|Q9DUD8|L_SENDA Large structural protein OS=Sendai virus (strain
Hamamatsu) GN=L PE=3 SV=1
Length = 2228

Score = 30.8 bits (68), Expect = 6.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1

Query: 250 LHNGCCFLSFPQQAGCPEKEQIDV 321
L+NGCC + PQ+A P + +D+
Sbjct: 1367 LNNGCCIMESPQEANIPPRSTLDL 1390


>sp|Q9MZ06|FGFP1_BOVIN Fibroblast growth factor-binding protein 1
OS=Bos taurus GN=FGFBP1 PE=1 SV=1
Length = 234

Score = 30.8 bits (68), Expect = 6.7
Identities = 12/58 (20%), Positives = 29/58 (50%)
Frame = -1

Query: 416 KWISIRAPTCMADMSRSHKSMPSRSEVLKADSTSICSFSGHPACCGKERKQQPLWREV 243
K+++ C +++ + + + E + D+T C F+G+P C + K W+++
Sbjct: 62 KFVTPDHADCRWAVTKQEEGIVLKVECTQRDNTFSCFFTGNPTSCLELHKNNAYWKQI 119


>sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens
GN=ZNF831 PE=2 SV=4
Length = 1677

Score = 30.4 bits (67), Expect = 8.8
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = -1

Query: 434 SRYKSLKWISIRA--PTCMADMSRSHKSMPSRSEV--LKADSTSICSFSGHPACCGKERK 267
SR ++ W+ R+ P + + + SE+ L C+ S P CCGKE K
Sbjct: 1307 SRLRTPTWVRRRSRHPPALEGLKPCRTPGQTSSEIAGLNLQEEPSCATSESPPCCGKEEK 1366

Query: 266 QQPLWREVVHT 234
++ R+ + T
Sbjct: 1367 KEGDCRQTLGT 1377


tr_hit_id A7P4E2
Definition tr|A7P4E2|A7P4E2_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera
Align length 79
Score (bit) 37.4
E-value 0.84
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950855|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_M24, 5'
(665 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P4E2|A7P4E2_VITVI Chromosome chr4 scaffold_6, whole genome ... 37 0.84
tr|A7P4E1|A7P4E1_VITVI Chromosome chr4 scaffold_6, whole genome ... 37 0.84

>tr|A7P4E2|A7P4E2_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032118001
PE=4 SV=1
Length = 261

Score = 37.4 bits (85), Expect = 0.84
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2

Query: 484 SRKALKMTDREKERKSNLAINL*SG*VSERPLVWQI*AGAIKA-CHQEARCSKQIAHQSV 308
SRK +K +K+R S++ ++ V + P QI GA K CH CS I H+ V
Sbjct: 18 SRKPIKWLHGKKQRTSSMTSSV-HNFVLDWPTRLQIAIGAAKGLCHMHENCSAPIIHRDV 76

Query: 307 PSPGILLVVEKKESNSRYG 251
S ILL E + +G
Sbjct: 77 KSSNILLDAEFNAKIADFG 95


>tr|A7P4E1|A7P4E1_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032117001
PE=4 SV=1
Length = 155

Score = 37.4 bits (85), Expect = 0.84
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2

Query: 484 SRKALKMTDREKERKSNLAINL*SG*VSERPLVWQI*AGAIKA-CHQEARCSKQIAHQSV 308
SRK +K +K+R S++ ++ V + P QI GA K CH CS I H+ V
Sbjct: 18 SRKPIKWLHGKKQRTSSMTSSV-HNFVLDWPTRLQIAIGAAKGLCHMHENCSAPIIHRDV 76

Query: 307 PSPGILLVVEKKESNSRYG 251
S ILL E + +G
Sbjct: 77 KSSNILLDAEFNAKIADFG 95