DK950857 |
Clone id |
TST38A01NGRL0009_N02 |
Library |
TST38 |
Length |
666 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_N02. 5' end sequence. |
Accession |
DK950857 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL980Contig1 |
Sequence |
GGCGCCATTCTGGCTCTCGTCTTCTATATATGGTCTTTGATCAAAGCTAACATCGCATGC TTACAGAATTCACAGAAAGACTGTTTCTTATTTTGGTGCCAAATAGGGCATGAGGTTCAT TGGAATGATTAAGAGATGGAGAAGAGTGCATTGGACTGTCCCTACCCGGGATGCTTCTTT TGTGTCATGAAAGAGGCAAACCCCACGAAGCGCCGTGCCAGTGTATCGAAATTTTTTAAG GAGTTTCCCAGCCAAGATGAGGAAGGGCAGGTCCTTGCTGTCAGCGGGCTTTGGAATACC GCAATGGCGCACCCCAATGATCCTGAGTTCATTGAGCTGGGAGTATTTGAGTGCATGGAA GCCCTTATTTGGAAAGGGATCAAGAACAGGCAATGGCTAGCAAAGGATCAGAACATCTAC ATTCCTTATTATGCTGCCCATATTATTGGCTCTTACACTATGAATATTGAGGAGTTCGCA GAAAGGGCAGTCAGGGCAGGTGTTATTCAGCCATTGGTAGAGCTACTTCGAGGGAGGCTG ACCTGGGTGGAGCAGAGGGTGGCTGTACGAGCACTAGGCCACCTGGCAACCTATGATTCC ACTTTTCCATTTGTTGCATCACAGCCTCAAATCCTGGAGCTAGCTATTCAACTTGCTGTC AATGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O60179 |
Definition |
sp|O60179|UTP10_SCHPO U3 small nucleolar RNA-associated protein 10 OS=Schizosaccharomyces pombe |
Align length |
138 |
Score (bit) |
40.8 |
E-value |
0.007 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6L4Y6 |
Definition |
tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subsp. japonica |
Align length |
174 |
Score (bit) |
311.0 |
E-value |
3.0e-83 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950857|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_N02, 5' (666 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subs... 311 3e-83 tr|B8AYC8|B8AYC8_ORYSI Putative uncharacterized protein OS=Oryza... 311 3e-83 tr|A3B457|A3B457_ORYSJ Putative uncharacterized protein OS=Oryza... 311 3e-83 tr|A7R002|A7R002_VITVI Chromosome chr7 scaffold_294, whole genom... 306 1e-81 tr|A5C8E6|A5C8E6_VITVI Putative uncharacterized protein OS=Vitis... 306 1e-81 tr|A9SVL4|A9SVL4_PHYPA Predicted protein OS=Physcomitrella paten... 305 2e-81 tr|Q9LX10|Q9LX10_ARATH Putative uncharacterized protein T31P16_1... 302 1e-80 tr|Q0WMT6|Q0WMT6_ARATH Putative uncharacterized protein At5g1020... 302 1e-80 tr|B7U9S2|B7U9S2_CARAS AT5G10200-like protein OS=Cardaminopsis a... 301 2e-80 tr|Q4ABQ0|Q4ABQ0_BRARP 80A08_17 OS=Brassica rapa subsp. pekinens... 298 2e-79 tr|A9THA5|A9THA5_PHYPA Predicted protein OS=Physcomitrella paten... 270 6e-71 tr|A7NU61|A7NU61_VITVI Chromosome chr18 scaffold_1, whole genome... 211 4e-53 tr|A5B9D4|A5B9D4_VITVI Putative uncharacterized protein OS=Vitis... 211 4e-53 tr|A7PLL7|A7PLL7_VITVI Chromosome chr7 scaffold_20, whole genome... 210 7e-53 tr|Q9SN15|Q9SN15_ARATH Putative uncharacterized protein F3A4.110... 195 2e-48 tr|Q9FMH1|Q9FMH1_ARATH Similarity to unknown protein OS=Arabidop... 166 2e-39 tr|Q8H061|Q8H061_ORYSJ Putative uncharacterized protein OSJNBa00... 152 2e-35 tr|B8AQG6|B8AQG6_ORYSI Putative uncharacterized protein OS=Oryza... 152 2e-35 tr|A3AFB3|A3AFB3_ORYSJ Putative uncharacterized protein OS=Oryza... 146 1e-33 tr|Q70JP1|Q70JP1_WHEAT Putative uncharacterized protein (Fragmen... 66 2e-09 tr|A9TWA5|A9TWA5_PHYPA Predicted protein OS=Physcomitrella paten... 35 3.2 tr|A4S8D9|A4S8D9_OSTLU Predicted protein OS=Ostreococcus lucimar... 35 3.2 tr|B6A9W1|B6A9W1_9CRYT RNA-metabolising metallo-beta-lactamase f... 35 4.2 tr|A9SHX6|A9SHX6_PHYPA Predicted protein OS=Physcomitrella paten... 34 7.2 tr|B4P546|B4P546_DROYA GE13968 OS=Drosophila yakuba GN=GE13968 P... 34 9.3 tr|B3NMM6|B3NMM6_DROER GG21025 OS=Drosophila erecta GN=GG21025 P... 34 9.3 tr|B7ZWY5|B7ZWY5_MAIZE Putative uncharacterized protein OS=Zea m... 34 9.4 tr|A9SKE0|A9SKE0_PHYPA Predicted protein OS=Physcomitrella paten... 34 9.4 tr|A7PU99|A7PU99_VITVI Chromosome chr7 scaffold_31, whole genome... 34 9.4
>tr|Q6L4Y6|Q6L4Y6_ORYSJ Os05g0421300 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0092E21.8 PE=2 SV=1 Length = 601
Score = 311 bits (796), Expect = 3e-83 Identities = 147/174 (84%), Positives = 159/174 (91%) Frame = +1
Query: 136 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 315 MEK DCPYPGCFFCVMKEANP+KRRASV KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MEKIQSDCPYPGCFFCVMKEANPSKRRASVLKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 316 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 495 NDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAVR Sbjct: 61 NDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVR 120
Query: 496 AGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQPQILELAIQLA 657 AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA ++LELAIQLA Sbjct: 121 AGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHGEVLELAIQLA 174
>tr|B8AYC8|B8AYC8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20013 PE=4 SV=1 Length = 601
Score = 311 bits (796), Expect = 3e-83 Identities = 147/174 (84%), Positives = 159/174 (91%) Frame = +1
Query: 136 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 315 MEK DCPYPGCFFCVMKEANP+KRRASV KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MEKIQSDCPYPGCFFCVMKEANPSKRRASVLKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 316 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 495 NDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAVR Sbjct: 61 NDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVR 120
Query: 496 AGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQPQILELAIQLA 657 AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA ++LELAIQLA Sbjct: 121 AGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHGEVLELAIQLA 174
>tr|A3B457|A3B457_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017829 PE=4 SV=1 Length = 540
Score = 311 bits (796), Expect = 3e-83 Identities = 147/174 (84%), Positives = 159/174 (91%) Frame = +1
Query: 136 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 315 MEK DCPYPGCFFCVMKEANP+KRRASV KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MEKIQSDCPYPGCFFCVMKEANPSKRRASVLKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 316 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 495 NDPEFI LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAVR Sbjct: 61 NDPEFINLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVR 120
Query: 496 AGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQPQILELAIQLA 657 AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA ++LELAIQLA Sbjct: 121 AGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHGEVLELAIQLA 174
>tr|A7R002|A7R002_VITVI Chromosome chr7 scaffold_294, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010915001 PE=4 SV=1 Length = 627
Score = 306 bits (783), Expect = 1e-81 Identities = 143/177 (80%), Positives = 162/177 (91%) Frame = +1
Query: 136 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 315 M+K + DCPYPGCFFCVMKE NP+KRRAS+ KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MDKVSPDCPYPGCFFCVMKEGNPSKRRASILKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 316 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 495 NDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAE AV Sbjct: 61 NDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVH 120
Query: 496 AGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQPQILELAIQLAVNA 666 AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP +AS +ILEL+IQLA+++ Sbjct: 121 AGVIPPLVELLRGRLTWVEQRVAVRALGHLATYASTFPALASHGEILELSIQLAMSS 177
>tr|A5C8E6|A5C8E6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023407 PE=4 SV=1 Length = 635
Score = 306 bits (783), Expect = 1e-81 Identities = 143/177 (80%), Positives = 162/177 (91%) Frame = +1
Query: 136 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 315 M+K + DCPYPGCFFCVMKE NP+KRRAS+ KFF+E PSQD++GQVL +SGLWNTAMAHP Sbjct: 1 MDKVSPDCPYPGCFFCVMKEGNPSKRRASILKFFRELPSQDDDGQVLPISGLWNTAMAHP 60
Query: 316 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 495 NDPEFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAE AV Sbjct: 61 NDPEFIELGIFECMAALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAESAVH 120
Query: 496 AGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQPQILELAIQLAVNA 666 AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STFP +AS +ILEL+IQLA+++ Sbjct: 121 AGVIPPLVELLRGRLTWVEQRVAVRALGHLATYASTFPALASHGEILELSIQLAMSS 177
>tr|A9SVL4|A9SVL4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_188847 PE=4 SV=1 Length = 643
Score = 305 bits (780), Expect = 2e-81 Identities = 144/177 (81%), Positives = 162/177 (91%) Frame = +1
Query: 136 MEKSALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHP 315 MEK + DCPYPGCFFCVMKE N +KRR++V+KFFKE PSQ+E+GQVLA+SGLWNTAMAHP Sbjct: 1 MEKHSSDCPYPGCFFCVMKETNLSKRRSNVAKFFKELPSQNEDGQVLAISGLWNTAMAHP 60
Query: 316 NDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVR 495 NDPEFIELG+FECM LIWKGI++R WLA+DQNIYIPYYAAHIIGSYTMN+EEFAE+AVR Sbjct: 61 NDPEFIELGIFECMARLIWKGIEDRNWLAQDQNIYIPYYAAHIIGSYTMNVEEFAEQAVR 120
Query: 496 AGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQPQILELAIQLAVNA 666 AGVI LVELLR RLTWVEQRVAVRALGHLATYDSTFP VA+ ILEL+IQLA++A Sbjct: 121 AGVIPALVELLRDRLTWVEQRVAVRALGHLATYDSTFPAVAAHTDILELSIQLAIDA 177
>tr|Q9LX10|Q9LX10_ARATH Putative uncharacterized protein T31P16_190 OS=Arabidopsis thaliana GN=T31P16_190 PE=4 SV=1 Length = 621
Score = 302 bits (773), Expect = 1e-80 Identities = 140/174 (80%), Positives = 159/174 (91%) Frame = +1
Query: 145 SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHPNDP 324 S+ +CPYPGCFFCVMKE NP+KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAHPNDP Sbjct: 5 SSQECPYPGCFFCVMKEGNPSKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAHPNDP 64
Query: 325 EFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVRAGV 504 EFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAV AGV Sbjct: 65 EFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVEAGV 124
Query: 505 IQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQPQILELAIQLAVNA 666 I PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA +ILELAIQLA+++ Sbjct: 125 IPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHGEILELAIQLAMSS 178
>tr|Q0WMT6|Q0WMT6_ARATH Putative uncharacterized protein At5g10200 OS=Arabidopsis thaliana GN=At5g10200 PE=2 SV=1 Length = 631
Score = 302 bits (773), Expect = 1e-80 Identities = 140/174 (80%), Positives = 159/174 (91%) Frame = +1
Query: 145 SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHPNDP 324 S+ +CPYPGCFFCVMKE NP+KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAHPNDP Sbjct: 5 SSQECPYPGCFFCVMKEGNPSKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAHPNDP 64
Query: 325 EFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVRAGV 504 EFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAV AGV Sbjct: 65 EFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVEAGV 124
Query: 505 IQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQPQILELAIQLAVNA 666 I PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA +ILELAIQLA+++ Sbjct: 125 IPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHGEILELAIQLAMSS 178
>tr|B7U9S2|B7U9S2_CARAS AT5G10200-like protein OS=Cardaminopsis arenosa PE=4 SV=1 Length = 630
Score = 301 bits (772), Expect = 2e-80 Identities = 139/174 (79%), Positives = 159/174 (91%) Frame = +1
Query: 145 SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAHPNDP 324 S+ +CPYPGCFFCVMKE NP+KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAHPNDP Sbjct: 5 SSQECPYPGCFFCVMKEGNPSKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAHPNDP 64
Query: 325 EFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAVRAGV 504 EFIELG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAV AGV Sbjct: 65 EFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAVEAGV 124
Query: 505 IQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQPQILELAIQLAVNA 666 + PLVELLRGRLTWVEQRVAVRALGHLATY STFP VA +ILELAIQLA+++ Sbjct: 125 VAPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHGEILELAIQLAMSS 178
>tr|Q4ABQ0|Q4ABQ0_BRARP 80A08_17 OS=Brassica rapa subsp. pekinensis GN=80A08_17 PE=4 SV=1 Length = 631
Score = 298 bits (764), Expect = 2e-79 Identities = 141/178 (79%), Positives = 160/178 (89%), Gaps = 1/178 (0%) Frame = +1
Query: 136 MEK-SALDCPYPGCFFCVMKEANPTKRRASVSKFFKEFPSQDEEGQVLAVSGLWNTAMAH 312 MEK S+ +CPYPGCFFCVMKE NP KRR+ + KFF++ PSQD++GQVL +SGLWNTAMAH Sbjct: 1 MEKASSQECPYPGCFFCVMKEGNPNKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAH 60
Query: 313 PNDPEFIELGVFECMEALIWKGIKNRQWLAKDQNIYIPYYAAHIIGSYTMNIEEFAERAV 492 PNDPEFI+LG+FECM ALIWKG+KNR+WL+ DQNIYIPYYAAHIIGSYTMN+EEFAERAV Sbjct: 61 PNDPEFIDLGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAV 120
Query: 493 RAGVIQPLVELLRGRLTWVEQRVAVRALGHLATYDSTFPFVASQPQILELAIQLAVNA 666 AGVI PLVELLRGRLTWVEQRVAVRALGHLATY STF VAS +ILELAIQL +++ Sbjct: 121 EAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFSSVASHGEILELAIQLGMSS 178
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