DK950860 |
Clone id |
TST38A01NGRL0009_N05 |
Library |
TST38 |
Length |
642 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_N05. 5' end sequence. |
Accession |
DK950860 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GGCAAAATCAGGAAAAGTGAGTTTTTCAAACGATGCTGGATCCCTGGAAGGGGGTAACCT GGAGGGAGGAAATGCTTATGATCTTCAAAACCAAGTTGAAGGTTTGAGGTCTCCAAGAAG ACTTGGACCTGTGAAGGTTGAACTTAGTGAAATTGACAGCAGTGTGAACTCGGCGAGGGC AACTGATGGAGCTTCACATAGTCTACATGGTACAGAAAGTGTTTCTGCTACAGGTGGGAT AATGGCGTGTGAGAGAGAATTAAATGATGATTTGAAGTCTACTTTTGATATTCCATGCTT TGACACAGCTCCCAGCATGTGGGAAGATCAGCTTGCCTGGCAGCACCAATTCTCAGAGTT ACAGGATATGGGCACCCCCCCCGACTCAGAGTCCCTCTCTGTCTTGAAAAAAAAAGAGGG AATTTGATGGCCACAATCTTCAGGACTATGTATATCCTTCTTTTGACGAACCAGAAATTC TTGGAGAGATGTGGTCTCTTGTCAACAATGACAATTATTGTGGCCTTGGCAGCAAGGAAA TGGCGGCTCCGCAGCTCACAAGCAAGTTTGATGGTGACTATATTGAGCTTAACGACATAG AGGCTCCCCCCAGTGGGTTTGCAGTGAGATCACCACTGGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8RXE7 |
Definition |
sp|Q8RXE7|AGD14_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana |
Align length |
100 |
Score (bit) |
32.7 |
E-value |
1.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7YZT6 |
Definition |
tr|Q7YZT6|Q7YZT6_CAEEL Trehalose-6-phosphate synthase (Trehalose 6-phosphate synthase protein 1, isoform a) OS=Caenorhabditis elegans |
Align length |
29 |
Score (bit) |
35.8 |
E-value |
2.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950860|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_N05, 5' (642 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7YZT6|Q7YZT6_CAEEL Trehalose-6-phosphate synthase (Trehalose... 36 2.3 tr|Q2L6W2|Q2L6W2_CAEEL Trehalose 6-phosphate synthase protein 1,... 36 2.3 tr|Q8PEU0|Q8PEU0_XANAC Beta-galactosidase OS=Xanthomonas axonopo... 35 3.9 tr|Q3BMC6|Q3BMC6_XANC5 Beta-galactosidase OS=Xanthomonas campest... 35 3.9 tr|B0ELZ1|B0ELZ1_ENTDI Tyrosine protein kinase, putative OS=Enta... 35 5.1 tr|Q7S8N1|Q7S8N1_NEUCR Putative uncharacterized protein OS=Neuro... 35 5.1 tr|B2ZZ15|B2ZZ15_DANRE Microtubule-associated protein 1b (Fragme... 34 6.6 tr|B2ZZ14|B2ZZ14_DANRE Hypothetical microtubule-associated prote... 34 6.6 tr|A5PLA7|A5PLA7_DANRE LOC559032 protein (Fragment) OS=Danio rer... 34 6.6 tr|O45868|O45868_CAEEL Protein T27F6.4, confirmed by transcript ... 34 6.6
>tr|Q7YZT6|Q7YZT6_CAEEL Trehalose-6-phosphate synthase (Trehalose 6-phosphate synthase protein 1, isoform a) OS=Caenorhabditis elegans GN=tps-1 PE=2 SV=1 Length = 1331
Score = 35.8 bits (81), Expect = 2.3 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3
Query: 432 HNLQDYVYPSFDEPEILGEMWSLVNNDNY 518 HNL Y+ P FD+PE+L E W NY Sbjct: 472 HNLPQYISPCFDDPELLREQWCAYVRVNY 500
>tr|Q2L6W2|Q2L6W2_CAEEL Trehalose 6-phosphate synthase protein 1, isoform b OS=Caenorhabditis elegans GN=tps-1 PE=2 SV=1 Length = 1294
Score = 35.8 bits (81), Expect = 2.3 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3
Query: 432 HNLQDYVYPSFDEPEILGEMWSLVNNDNY 518 HNL Y+ P FD+PE+L E W NY Sbjct: 435 HNLPQYISPCFDDPELLREQWCAYVRVNY 463
>tr|Q8PEU0|Q8PEU0_XANAC Beta-galactosidase OS=Xanthomonas axonopodis pv. citri GN=XAC4250 PE=4 SV=1 Length = 851
Score = 35.0 bits (79), Expect = 3.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3
Query: 309 LPACGKISLPGSTNSQSYRIWAPPPTQSP 395 +PA G + GST + R+W PPPTQ P Sbjct: 269 VPAGGTAHVQGSTRIDAPRLWGPPPTQQP 297
>tr|Q3BMC6|Q3BMC6_XANC5 Beta-galactosidase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=bga2 PE=4 SV=1 Length = 923
Score = 35.0 bits (79), Expect = 3.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3
Query: 309 LPACGKISLPGSTNSQSYRIWAPPPTQSP 395 +PA G + GST + R+W PPPTQ P Sbjct: 341 VPAGGTAQVQGSTRIDAPRLWGPPPTQHP 369
>tr|B0ELZ1|B0ELZ1_ENTDI Tyrosine protein kinase, putative OS=Entamoeba dispar SAW760 GN=EDI_160010 PE=4 SV=1 Length = 495
Score = 34.7 bits (78), Expect = 5.1 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +3
Query: 462 FDEPEILGEMWSLVNNDNYCGLGSKEMAAPQLTSKFDGDYI 584 F++P+I+ EM +V+ + GL K++A +L+ K DG Y+ Sbjct: 373 FNDPKIIDEMRDIVSASYFSGLIDKKVAEGKLSGKVDGTYL 413
>tr|Q7S8N1|Q7S8N1_NEUCR Putative uncharacterized protein OS=Neurospora crassa GN=NCU06583 PE=4 SV=2 Length = 1250
Score = 34.7 bits (78), Expect = 5.1 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +2
Query: 239 IMACERELNDDLKSTFDIPCFDTAPSMWEDQLAWQH--QFSELQDMGTPPDSES 394 I A ER L+ DLKS+ + FD + S+ L WQ + + L + PPD+ + Sbjct: 1042 IAALERRLHRDLKSSGEFGVFDDSRSLLPRSLLWQRGAEVTSLNKISFPPDTHT 1095
>tr|B2ZZ15|B2ZZ15_DANRE Microtubule-associated protein 1b (Fragment) OS=Danio rerio GN=map1b PE=2 SV=1 Length = 364
Score = 34.3 bits (77), Expect = 6.6 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = +3
Query: 411 KKREFDGHNLQDYVYPSFDEPEILGEMWSLVNNDNYCGLGSKEMAAP--QLTSKFDGDYI 584 K D HNLQD++Y + P IL EM L Y S E+++P L G ++ Sbjct: 198 KNSNLDKHNLQDFIYMKLNSPTILPEMEGLSEFTEYLS-ESVEISSPFDMLEPPTSGGFL 256
Query: 585 ELN 593 +L+ Sbjct: 257 KLS 259
>tr|B2ZZ14|B2ZZ14_DANRE Hypothetical microtubule-associated protein 1b OS=Danio rerio GN=map1b PE=2 SV=1 Length = 2033
Score = 34.3 bits (77), Expect = 6.6 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = +3
Query: 411 KKREFDGHNLQDYVYPSFDEPEILGEMWSLVNNDNYCGLGSKEMAAP--QLTSKFDGDYI 584 K D HNLQD++Y + P IL EM L Y S E+++P L G ++ Sbjct: 198 KNSNLDKHNLQDFIYMKLNSPTILPEMEGLSEFTEYLS-ESVEISSPFDMLEPPTSGGFL 256
Query: 585 ELN 593 +L+ Sbjct: 257 KLS 259
>tr|A5PLA7|A5PLA7_DANRE LOC559032 protein (Fragment) OS=Danio rerio GN=LOC559032 PE=2 SV=1 Length = 589
Score = 34.3 bits (77), Expect = 6.6 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = +3
Query: 411 KKREFDGHNLQDYVYPSFDEPEILGEMWSLVNNDNYCGLGSKEMAAP--QLTSKFDGDYI 584 K D HNLQD++Y + P IL EM L Y S E+++P L G ++ Sbjct: 198 KNSNLDKHNLQDFIYMKLNSPTILPEMEGLSEFTEYLS-ESVEISSPFDMLEPPTSGGFL 256
Query: 585 ELN 593 +L+ Sbjct: 257 KLS 259
>tr|O45868|O45868_CAEEL Protein T27F6.4, confirmed by transcript evidence OS=Caenorhabditis elegans GN=T27F6.4 PE=2 SV=1 Length = 206
Score = 34.3 bits (77), Expect = 6.6 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 5/117 (4%) Frame = -2
Query: 407 SRQRGTLSRGGCPYPVTLRIGAARQADLPTCWELCQSMEYQK*TSNHHLILSHTPLSHL* 228 S Q +S GG P PVTL + + +++Y+K T+NHHL H+ H Sbjct: 63 SSQSSVIS-GGVPVPVTLLELKKKDRSEKN---VVTNLKYRKPTANHHLDSVHSSSEH-- 116
Query: 227 QKHFLYHVDYVKLHQLP-SPSSHCCQF-H*VQPSQVQVFLETSNLQLGFE---DHKH 72 H +H+ L + P SPSS + V VF N L ++ DH H Sbjct: 117 --HHHHHLSLSSLTRRPGSPSSSGYETDSLVDQENCDVFSSLFNSSLSYQSALDHHH 171
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