DK950885 |
Clone id |
TST38A01NGRL0009_O09 |
Library |
TST38 |
Length |
604 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_O09. 5' end sequence. |
Accession |
DK950885 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2308Contig1 |
Sequence |
CTATGTTGATGTCCAGGTGAGGTACAAAATATTACCAACATGAGCTGCAATGGATGCAGG GTTTTGAGGAAAGGATGCATTGACACATGCATCCTTAGGTCCTGTTTGCAGTGGATAGAG TCCCCTGAAGCACAGGGACATGCGACAGTCTTCGTCGCAAAATTCTTTGGCCGTGCCGGC ATGCTAAGCTTTATCAATAGTGTAGCAGAGAGCCAGAGGCCAGGTAAATTAACTAGGGGT CCTTTCTTCTAGAAACTTGCATACATAAAAATCCCAAAGCATTGATGCTTTTTTTTTTGG CTAGCTGTTCCCTCTGATCTTGCACATGACCAGAGTTTCTTATGTATATAGAAATTGGTG CTAGATTTTTCTACCTCCCCCTCTGTTTCTCCATTTGTGGCACTGCAAAAAGAGATGATC GTGACATGGATCACAATGTCGATGTTCTGGCGCATTTGCCACATTCTCCCGATTAGGAAG TCTGTTTCTCTTGTGGAATTTAAGGGTTATGTTGTAGATTTTCAGCCATTGTTGAAGCTC TTGCCATGGTGGTTTTTGTGGGTGCAGCCCTTTTTCAGTCTCTACTGTATGAGGCATGTG GAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SZE8 |
Definition |
sp|Q9SZE8|LBD39_ARATH LOB domain-containing protein 39 OS=Arabidopsis thaliana |
Align length |
61 |
Score (bit) |
112.0 |
E-value |
1.0e-24 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PK79 |
Definition |
tr|A9PK79|A9PK79_POPJC Putative uncharacterized protein OS=Populus jackii |
Align length |
61 |
Score (bit) |
115.0 |
E-value |
2.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950885|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_O09, 5' (604 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PK79|A9PK79_POPJC Putative uncharacterized protein OS=Popul... 115 2e-24 tr|Q0PN09|Q0PN09_9FABA Lateral organ boundaries domain protein O... 112 2e-23 tr|B7XG95|B7XG95_ARATH ASYMMETRIC LEAVES2-like 41 protein OS=Ara... 112 2e-23 tr|B7XG94|B7XG94_ARATH ASYMMETRIC LEAVES2-like 40 protein OS=Ara... 112 2e-23 tr|B6UA03|B6UA03_MAIZE Putative uncharacterized protein OS=Zea m... 111 3e-23 tr|A7PLN7|A7PLN7_VITVI Chromosome chr7 scaffold_20, whole genome... 110 5e-23 tr|Q6AV61|Q6AV61_ORYSJ Os03g0445700 protein OS=Oryza sativa subs... 109 1e-22 tr|A9T578|A9T578_PHYPA Predicted protein (Fragment) OS=Physcomit... 109 1e-22 tr|A2XIF2|A2XIF2_ORYSI Putative uncharacterized protein OS=Oryza... 109 1e-22 tr|A9TCE3|A9TCE3_PHYPA Predicted protein (Fragment) OS=Physcomit... 108 2e-22 tr|B7XG93|B7XG93_ARATH ASYMMETRIC LEAVES2-like 39 protein OS=Ara... 108 2e-22 tr|B4FE47|B4FE47_MAIZE Putative uncharacterized protein OS=Zea m... 108 2e-22 tr|A9S1K7|A9S1K7_PHYPA Predicted protein (Fragment) OS=Physcomit... 107 4e-22 tr|A9RNM5|A9RNM5_PHYPA Predicted protein (Fragment) OS=Physcomit... 107 5e-22 tr|A3BLQ2|A3BLQ2_ORYSJ Putative uncharacterized protein OS=Oryza... 107 7e-22 tr|A7NU79|A7NU79_VITVI Chromosome chr18 scaffold_1, whole genome... 106 1e-21 tr|Q7EZ26|Q7EZ26_ORYSJ Os07g0589000 protein OS=Oryza sativa subs... 103 1e-20 tr|B8B806|B8B806_ORYSI Putative uncharacterized protein OS=Oryza... 103 1e-20 tr|A9U301|A9U301_PHYPA Predicted protein (Fragment) OS=Physcomit... 100 5e-20 tr|A7QL54|A7QL54_VITVI Chromosome chr3 scaffold_117, whole genom... 100 1e-19 tr|A5AMP6|A5AMP6_VITVI Putative uncharacterized protein OS=Vitis... 100 1e-19 tr|B6UCF2|B6UCF2_MAIZE Seed specific protein Bn15D17A OS=Zea may... 96 2e-18 tr|A5BBT8|A5BBT8_VITVI Putative uncharacterized protein (Chromos... 96 2e-18 tr|Q7XYW2|Q7XYW2_BRANA Seed specific protein Bn15D17A OS=Brassic... 95 4e-18 tr|B6TG94|B6TG94_MAIZE Seed specific protein Bn15D17A OS=Zea may... 95 4e-18 tr|Q9LG92|Q9LG92_ORYSJ Putative seed specific protein Bn15D17A (... 93 1e-17 tr|A7PGT1|A7PGT1_VITVI Chromosome chr17 scaffold_16, whole genom... 93 1e-17 tr|A2WK94|A2WK94_ORYSI Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|B7XG92|B7XG92_ARATH ASYMMETRIC LEAVES2-like 38 protein OS=Ara... 93 1e-17 tr|A7P383|A7P383_VITVI Chromosome chr1 scaffold_5, whole genome ... 93 1e-17
>tr|A9PK79|A9PK79_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 242
Score = 115 bits (288), Expect = 2e-24 Identities = 52/61 (85%), Positives = 56/61 (91%) Frame = +1
Query: 40 MSCNGCRVLRKGCIDTCILRSCLQWIESPEAQGHATVFVAKFFGRAGMLSFINSVAESQR 219 MSCNGCRVLRKGC + CILR CLQWIESPEAQGHATVFVAKFFGRAG++SFI+SV E QR Sbjct: 1 MSCNGCRVLRKGCSENCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISSVPEDQR 60
Query: 220 P 222 P Sbjct: 61 P 61
>tr|Q0PN09|Q0PN09_9FABA Lateral organ boundaries domain protein OS=Caragana korshinskii PE=2 SV=1 Length = 231
Score = 112 bits (280), Expect = 2e-23 Identities = 48/61 (78%), Positives = 58/61 (95%) Frame = +1
Query: 40 MSCNGCRVLRKGCIDTCILRSCLQWIESPEAQGHATVFVAKFFGRAGMLSFINSVAESQR 219 MSCNGCRVLRKGC ++CILR CLQW+E+PEAQGHATVFVAKFFGRAG++SF+++V E+QR Sbjct: 1 MSCNGCRVLRKGCSESCILRPCLQWLENPEAQGHATVFVAKFFGRAGLMSFLSNVPETQR 60
Query: 220 P 222 P Sbjct: 61 P 61
>tr|B7XG95|B7XG95_ARATH ASYMMETRIC LEAVES2-like 41 protein OS=Arabidopsis thaliana GN=ASL41 PE=2 SV=1 Length = 240
Score = 112 bits (280), Expect = 2e-23 Identities = 51/61 (83%), Positives = 56/61 (91%) Frame = +1
Query: 40 MSCNGCRVLRKGCIDTCILRSCLQWIESPEAQGHATVFVAKFFGRAGMLSFINSVAESQR 219 MSCNGCRVLRKGC +TCILR CLQWIES E+QGHATVFVAKFFGRAG++SFI+SV E QR Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60
Query: 220 P 222 P Sbjct: 61 P 61
>tr|B7XG94|B7XG94_ARATH ASYMMETRIC LEAVES2-like 40 protein OS=Arabidopsis thaliana GN=ASL40 PE=2 SV=1 Length = 247
Score = 112 bits (279), Expect = 2e-23 Identities = 50/61 (81%), Positives = 56/61 (91%) Frame = +1
Query: 40 MSCNGCRVLRKGCIDTCILRSCLQWIESPEAQGHATVFVAKFFGRAGMLSFINSVAESQR 219 MSCNGCRVLRKGC + CILR C+QWIESPEAQGHATVFVAKFFGRAG++SFI++V ESQ Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60
Query: 220 P 222 P Sbjct: 61 P 61
>tr|B6UA03|B6UA03_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 323
Score = 111 bits (278), Expect = 3e-23 Identities = 49/64 (76%), Positives = 58/64 (90%) Frame = +1
Query: 40 MSCNGCRVLRKGCIDTCILRSCLQWIESPEAQGHATVFVAKFFGRAGMLSFINSVAESQR 219 MSCNGCRVLRKGC + C+LR CLQWI++ EAQGHATVFVAKFFGRAG+LSFI++V ++QR Sbjct: 1 MSCNGCRVLRKGCSEACVLRPCLQWIDAAEAQGHATVFVAKFFGRAGLLSFISAVPDAQR 60
Query: 220 PGKL 231 PG L Sbjct: 61 PGLL 64
>tr|A7PLN7|A7PLN7_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019643001 PE=4 SV=1 Length = 228
Score = 110 bits (276), Expect = 5e-23 Identities = 49/61 (80%), Positives = 57/61 (93%) Frame = +1
Query: 40 MSCNGCRVLRKGCIDTCILRSCLQWIESPEAQGHATVFVAKFFGRAGMLSFINSVAESQR 219 MSCNGCRVLRKGC ++CILR CLQWIES E+QGHATVFVAKFFGRAG++SFI++V E+QR Sbjct: 1 MSCNGCRVLRKGCSESCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISAVPENQR 60
Query: 220 P 222 P Sbjct: 61 P 61
>tr|Q6AV61|Q6AV61_ORYSJ Os03g0445700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0035N15.7 PE=2 SV=1 Length = 204
Score = 109 bits (272), Expect = 1e-22 Identities = 48/61 (78%), Positives = 56/61 (91%) Frame = +1
Query: 40 MSCNGCRVLRKGCIDTCILRSCLQWIESPEAQGHATVFVAKFFGRAGMLSFINSVAESQR 219 MSCNGCRVLRKGC D C+LR CLQWI++ +AQGHATVFVAKFFGRAG+LSFI++V E+QR Sbjct: 1 MSCNGCRVLRKGCSDGCVLRPCLQWIDAADAQGHATVFVAKFFGRAGLLSFISAVPEAQR 60
Query: 220 P 222 P Sbjct: 61 P 61
>tr|A9T578|A9T578_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48199 PE=4 SV=1 Length = 107
Score = 109 bits (272), Expect = 1e-22 Identities = 48/61 (78%), Positives = 56/61 (91%) Frame = +1
Query: 40 MSCNGCRVLRKGCIDTCILRSCLQWIESPEAQGHATVFVAKFFGRAGMLSFINSVAESQR 219 MSCNGCRVLRKGC ++CILR CLQWI+S +AQGHATVFVAKFFGRAG++SFI +V E+QR Sbjct: 1 MSCNGCRVLRKGCSESCILRPCLQWIDSADAQGHATVFVAKFFGRAGLMSFITAVPENQR 60
Query: 220 P 222 P Sbjct: 61 P 61
>tr|A2XIF2|A2XIF2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12212 PE=4 SV=1 Length = 204
Score = 109 bits (272), Expect = 1e-22 Identities = 48/61 (78%), Positives = 56/61 (91%) Frame = +1
Query: 40 MSCNGCRVLRKGCIDTCILRSCLQWIESPEAQGHATVFVAKFFGRAGMLSFINSVAESQR 219 MSCNGCRVLRKGC D C+LR CLQWI++ +AQGHATVFVAKFFGRAG+LSFI++V E+QR Sbjct: 1 MSCNGCRVLRKGCSDGCVLRPCLQWIDAADAQGHATVFVAKFFGRAGLLSFISAVPEAQR 60
Query: 220 P 222 P Sbjct: 61 P 61
>tr|A9TCE3|A9TCE3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193700 PE=4 SV=1 Length = 104
Score = 108 bits (271), Expect = 2e-22 Identities = 48/61 (78%), Positives = 56/61 (91%) Frame = +1
Query: 40 MSCNGCRVLRKGCIDTCILRSCLQWIESPEAQGHATVFVAKFFGRAGMLSFINSVAESQR 219 MSC+GCRVLRKGC DTCILR CLQWIES +AQGHATVFVAKFFGRAG++ FI++V E++R Sbjct: 1 MSCDGCRVLRKGCSDTCILRHCLQWIESADAQGHATVFVAKFFGRAGLMGFISAVHETER 60
Query: 220 P 222 P Sbjct: 61 P 61
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