DK950897
Clone id TST38A01NGRL0009_O23
Library
Length 400
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_O23. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
TGCCTACTTTGTACAAAATAGTTGGTAGAAAGAAAAAGAATGAAAACCCCCAGGTGGTAA
GCTTTAGGTTATGAGCTCGGAGGAGCAATGGTGAGCAAGGCGCTACCTCTGGACGACGAG
GATTCAGATGGCGAGAAAGAAAAGAAAGTCCCCCGCTTGAACATTAATCAGGTATATGCG
GACCGATTTGCCCATAACATGCGGCGCGAAGCTCTTCACCGGCTGCTAGAGTTGAATAAG
CGCGGTTTTGTGGATTCTTCTGATGATGATGAAGATGACGAGTCCTCTGATGATGGGTTC
CTCCCCCCTGACACAAATGCTCGCATTTTCCATACCCTTTCCAAAATCATGCGCATAGAC
CCTGTCCGGGGGGGGGGGATAATTTTTTTTTTTTTTTTTT
■■Homology search results ■■ -
sp_hit_id Q61645
Definition sp|Q61645|HAIR_MOUSE Protein hairless OS=Mus musculus
Align length 38
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950897|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_O23, 5'
(375 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q61645|HAIR_MOUSE Protein hairless OS=Mus musculus GN=Hr PE=2... 31 2.2
sp|P97609|HAIR_RAT Protein hairless OS=Rattus norvegicus GN=Hr P... 30 4.9
sp|Q09799|KRI1_SCHPO Protein kri1 OS=Schizosaccharomyces pombe G... 29 6.3
sp|Q8T115|HCYC_SCUCO Hemocyanin subunit C OS=Scutigera coleoptra... 29 8.3

>sp|Q61645|HAIR_MOUSE Protein hairless OS=Mus musculus GN=Hr PE=2
SV=2
Length = 1182

Score = 30.8 bits (68), Expect = 2.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2

Query: 62 NGEQGAT--SGRRGFRWRERKESPPLEH*SGICGPICP 169
NGE+ + G+ G RW+E + PL CGP CP
Sbjct: 83 NGERKGSWLGGKEGLRWKEAMLAHPL----AFCGPACP 116


>sp|P97609|HAIR_RAT Protein hairless OS=Rattus norvegicus GN=Hr PE=2
SV=2
Length = 1181

Score = 29.6 bits (65), Expect = 4.9
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2

Query: 62 NGEQGAT--SGRRGFRWRERKESPPLEH*SGICGPICP 169
NGE+ A + G RW+E + PL CGP CP
Sbjct: 83 NGERKANWLGSKEGLRWKEAMLAHPL----AFCGPACP 116


>sp|Q09799|KRI1_SCHPO Protein kri1 OS=Schizosaccharomyces pombe
GN=kri1 PE=1 SV=1
Length = 598

Score = 29.3 bits (64), Expect = 6.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3

Query: 138 INQVYADRFAHNMRREALHRL 200
IN+ YA RF HN +RE L +L
Sbjct: 61 INEEYAKRFEHNKKREELQKL 81


>sp|Q8T115|HCYC_SCUCO Hemocyanin subunit C OS=Scutigera coleoptrata
GN=HCC PE=1 SV=1
Length = 673

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3

Query: 123 VPRLNINQVYADRFAHNMRREALHRLLELNKRG 221
VPR I+ ++ D+F ++ + +HRLLEL+ RG
Sbjct: 142 VPR--IHDIFPDKF---LKEDVIHRLLELSNRG 169


tr_hit_id A9SJA6
Definition tr|A9SJA6|A9SJA6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 69
Score (bit) 53.5
E-value 5.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950897|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_O23, 5'
(375 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SJA6|A9SJA6_PHYPA Predicted protein OS=Physcomitrella paten... 54 5e-06
tr|B2AXE9|B2AXE9_PODAN Predicted CDS Pa_7_10320 OS=Podospora ans... 45 0.002
tr|Q6AVM2|Q6AVM2_ORYSJ Os05g0490000 protein OS=Oryza sativa subs... 41 0.026
tr|Q2H6P3|Q2H6P3_CHAGB Putative uncharacterized protein OS=Chaet... 37 0.49
tr|Q7RWE9|Q7RWE9_NEUCR Predicted protein OS=Neurospora crassa GN... 35 1.4
tr|B6JX38|B6JX38_SCHJP Kri1 OS=Schizosaccharomyces japonicus yFS... 34 4.1
tr|A1D488|A1D488_NEOFI Ribosome biogenesis protein Kri1 OS=Neosa... 33 9.2

>tr|A9SJA6|A9SJA6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_165236 PE=4 SV=1
Length = 642

Score = 53.5 bits (127), Expect = 5e-06
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +3

Query: 138 INQVYADRFAHNMRREALHRLLELNKRGFV-XXXXXXXXXXXXXXGFLPPDTNARIFHTL 314
+N+ +A RF HN +RE LHRL EL K+G+ G LP T+ +IF TL
Sbjct: 29 VNENFAKRFTHNKQREDLHRLQELKKKGWAGSDSDDSESEDEDEDGLLPQKTDIQIFETL 88

Query: 315 SKIMRIDPV 341
+KI + DP+
Sbjct: 89 AKIKKKDPI 97


>tr|B2AXE9|B2AXE9_PODAN Predicted CDS Pa_7_10320 OS=Podospora
anserina PE=4 SV=1
Length = 699

Score = 44.7 bits (104), Expect = 0.002
Identities = 27/71 (38%), Positives = 32/71 (45%)
Frame = +3

Query: 126 PRLNINQVYADRFAHNMRREALHRLLELNKRGFVXXXXXXXXXXXXXXGFLPPDTNARIF 305
P LNIN+ YA RF HN +RE LHRL E G + D +A I
Sbjct: 46 PGLNINEEYARRFEHNKKREELHRLQEKYGAGEESESSSDDESEDDEAALITEDLDAEIS 105

Query: 306 HTLSKIMRIDP 338
TL+ I DP
Sbjct: 106 ATLAAIKNKDP 116


>tr|Q6AVM2|Q6AVM2_ORYSJ Os05g0490000 protein OS=Oryza sativa subsp.
japonica GN=OJ1119_H02.21 PE=4 SV=1
Length = 656

Score = 41.2 bits (95), Expect = 0.026
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3

Query: 129 RLNINQVYADRFAHNMRREALHRLLELNKRGFV 227
++ IN+ YA RF HN RREAL RL E K+G V
Sbjct: 33 KIQINEEYARRFEHNKRREALQRLEERKKKGLV 65


>tr|Q2H6P3|Q2H6P3_CHAGB Putative uncharacterized protein
OS=Chaetomium globosum GN=CHGG_05672 PE=4 SV=1
Length = 702

Score = 37.0 bits (84), Expect = 0.49
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +3

Query: 132 LNINQVYADRFAHNMRREALHRLLELNKRG 221
L IN+ YA RF HN +RE +HRL E K G
Sbjct: 49 LKINEEYARRFEHNKKREEMHRLQEKYKPG 78


>tr|Q7RWE9|Q7RWE9_NEUCR Predicted protein OS=Neurospora crassa
GN=NCU06409 PE=4 SV=1
Length = 723

Score = 35.4 bits (80), Expect = 1.4
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +3

Query: 132 LNINQVYADRFAHNMRREALHRLLE 206
L IN+ YA RF HN +RE LHRL E
Sbjct: 50 LKINEEYARRFEHNKKREELHRLEE 74


>tr|B6JX38|B6JX38_SCHJP Kri1 OS=Schizosaccharomyces japonicus yFS275
GN=SJAG_00965 PE=4 SV=1
Length = 578

Score = 33.9 bits (76), Expect = 4.1
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3

Query: 132 LNINQVYADRFAHNMRREALHRLLELNKRGFVXXXXXXXXXXXXXXG-FLPPDTNARIFH 308
L IN+ +A RF HN +RE L RL E G + P+ +A I
Sbjct: 48 LKINKEFARRFEHNKKREELQRLQEKYGNAADEDEDDSDSVVEDSDGELVTPEVDAAILK 107

Query: 309 TLSKIMRIDP 338
T+ KI DP
Sbjct: 108 TIIKIRNKDP 117


>tr|A1D488|A1D488_NEOFI Ribosome biogenesis protein Kri1
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181) GN=NFIA_019350 PE=4 SV=1
Length = 617

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3

Query: 126 PRLNINQVYADRFAHNMRREALHRL 200
P L IN+ YA RF HN +RE L +L
Sbjct: 35 PALKINEEYARRFEHNKKREELQKL 59