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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950903
Clone id TST38A01NGRL0009_P06
Library
Length 579
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_P06. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CAAGAGTTAATGATGTCATCTGCGACTGCTGTGACGGGAGCGATGAATACAATGGAAAAA
TGCAGTGCAAACCTGTTTGCAATGAGGAGGGTGGTGATGCATCGAAACAAGTATTGCCCA
CAAAGGCAGCAAGAGAAGTCATTGTGACGGATAGCAGAAAGTCCTTCCTTTCGGAGCACG
AGAGTGAGCCATTGGATGCCAGTTCTAAGTCTTATTTTCTTGGGATATTGGAAGTGCTGG
AGCTACTTCTCGTCATGCTGGCTTTGTGGCAGTTTTATAGTTGGACTTTTCGTGGTGGTT
TCGCTTTGAGGAGGAGATTGCCTCGCTAGCCTCAATTAATGACCCTTGGTAATTATCAAA
TGGAGGTATATGATACGAAAATGCCAAAATGGCATTCATGTATGATGCAGGAGGGGAGGA
GGTGAAAGATGACTTTCGGGGATTTCCCAAGCCATAGCTAGCTTGCTCCATAGAAAAGAG
TCGGCTCTCAATGTTGTGAGTTTGGCCTTGTAAGCATCTCTAATTGTTTGAATGCAATTT
TGCAGTGAGTGTGGCTCAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P14314
Definition sp|P14314|GLU2B_HUMAN Glucosidase 2 subunit beta OS=Homo sapiens
Align length 30
Score (bit) 49.3
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950903|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_P06, 5'
         (557 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P14314|GLU2B_HUMAN Glucosidase 2 subunit beta OS=Homo sapiens...    49   1e-05
sp|O08795|GLU2B_MOUSE Glucosidase 2 subunit beta OS=Mus musculus...    49   2e-05
sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus G...    48   4e-05
sp|Q9USH8|GLU2B_SCHPO Glucosidase 2 subunit beta OS=Schizosaccha...    36   0.11 
sp|Q04924|GLU2B_YEAST Glucosidase 2 subunit beta OS=Saccharomyce...    33   1.2  

>sp|P14314|GLU2B_HUMAN Glucosidase 2 subunit beta OS=Homo sapiens
           GN=PRKCSH PE=1 SV=2
          Length = 528

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEG 92
           RVND +CDCCDG+DEYN  + C+  C E+G
Sbjct: 91  RVNDGVCDCCDGTDEYNSGVICENTCKEKG 120


>sp|O08795|GLU2B_MOUSE Glucosidase 2 subunit beta OS=Mus musculus
           GN=Prkcsh PE=1 SV=1
          Length = 521

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEG 92
           RVND +CDCCDG+DEYN    C+  C E+G
Sbjct: 91  RVNDGVCDCCDGTDEYNSGTVCENTCREKG 120


>sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus
           GN=PRKCSH PE=2 SV=1
          Length = 533

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +3

Query: 6   VNDVICDCCDGSDEYNGKMQCKPVCNEEG 92
           VND +CDCCDG+DEYN  + C+  C E+G
Sbjct: 91  VNDGVCDCCDGTDEYNSGIVCENTCKEKG 119


>sp|Q9USH8|GLU2B_SCHPO Glucosidase 2 subunit beta
           OS=Schizosaccharomyces pombe GN=gtb1 PE=2 SV=1
          Length = 506

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEE 89
           RV+D +CDCCDGSDE    ++C   C ++
Sbjct: 100 RVDDTVCDCCDGSDE--SLIKCPNTCAQK 126



 Score = 33.1 bits (74), Expect = 0.94
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 6/29 (20%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDE------YNGKMQCK 71
           +VND  CDC DGSDE      +NGK  CK
Sbjct: 59  QVNDDYCDCPDGSDEPGTSACHNGKFFCK 87


>sp|Q04924|GLU2B_YEAST Glucosidase 2 subunit beta OS=Saccharomyces
           cerevisiae GN=GTB1 PE=1 SV=1
          Length = 702

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
 Frame = +3

Query: 6   VNDVICDCCDGSDE-------YNGKMQCKPVCNEEGGDASKQVLPTKAAREVIVTDSRK 161
           V D ICDCCD SDE       ++    C  + NE    ASK++   +  +E +    RK
Sbjct: 119 VADGICDCCDCSDELLSGYELFDAGSNCSQLKNEFDIMASKELSSYREGKEALEELERK 177
tr_hit_id A8WP81
Definition tr|A8WP81|A8WP81_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae
Align length 60
Score (bit) 54.3
E-value 4.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950903|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_P06, 5'
         (557 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8WP81|A8WP81_CAEBR Putative uncharacterized protein OS=Caeno...    54   4e-06
tr|B3S3S3|B3S3S3_TRIAD Putative uncharacterized protein OS=Trich...    53   1e-05
tr|Q8LDD0|Q8LDD0_ARATH Putative uncharacterized protein OS=Arabi...    52   2e-05
tr|B8A034|B8A034_MAIZE Putative uncharacterized protein OS=Zea m...    52   2e-05
tr|A7P0C1|A7P0C1_VITVI Chromosome chr6 scaffold_3, whole genome ...    52   2e-05
tr|A8Q3R5|A8Q3R5_BRUMA Protein kinase C substrate 80K-H, putativ...    52   2e-05
tr|A7SJQ2|A7SJQ2_NEMVE Predicted protein OS=Nematostella vectens...    52   2e-05
tr|Q5NBP9|Q5NBP9_ORYSJ cDNA clone:J033114E08, full insert sequen...    52   3e-05
tr|A9SLW4|A9SLW4_PHYPA Predicted protein OS=Physcomitrella paten...    52   3e-05
tr|A9NKT5|A9NKT5_PICSI Putative uncharacterized protein OS=Picea...    52   3e-05
tr|A2ZRS6|A2ZRS6_ORYSJ Putative uncharacterized protein OS=Oryza...    52   3e-05
tr|A2WNF5|A2WNF5_ORYSI Putative uncharacterized protein OS=Oryza...    52   3e-05
tr|Q9FM96|Q9FM96_ARATH Genomic DNA, chromosome 5, P1 clone: MCD7...    51   4e-05
tr|Q57VU0|Q57VU0_9TRYP Protein kinase C substrate protein, heavy...    51   5e-05
tr|B7ZYL8|B7ZYL8_MAIZE Putative uncharacterized protein OS=Zea m...    50   6e-05
tr|Q76C53|Q76C53_9TRYP Putative type-II membrane or secretory pr...    50   1e-04
tr|Q23440|Q23440_CAEEL Protein ZK1307.8, confirmed by transcript...    50   1e-04
tr|A9URN6|A9URN6_MONBE Predicted protein OS=Monosiga brevicollis...    49   1e-04
tr|B4DJQ5|B4DJQ5_HUMAN cDNA FLJ59211, highly similar to Glucosid...    49   1e-04
tr|A8K318|A8K318_HUMAN cDNA FLJ78273, highly similar to Homo sap...    49   1e-04
tr|Q3U518|Q3U518_MOUSE Putative uncharacterized protein OS=Mus m...    49   2e-04
tr|Q3TWG2|Q3TWG2_MOUSE Putative uncharacterized protein OS=Mus m...    49   2e-04
tr|B1WC34|B1WC34_RAT Protein kinase C substrate 80K-H (Protein k...    49   2e-04
tr|B6N7E1|B6N7E1_BRAFL Putative uncharacterized protein OS=Branc...    49   2e-04
tr|Q6GLZ2|Q6GLZ2_XENLA MGC84105 protein OS=Xenopus laevis GN=MGC...    49   2e-04
tr|Q6P373|Q6P373_XENTR Protein kinase C substrate 80K-H OS=Xenop...    47   5e-04
tr|A8WGX5|A8WGX5_XENTR Protein kinase C substrate 80K-H OS=Xenop...    47   5e-04
tr|Q4DXF6|Q4DXF6_TRYCR Protein kinase C substrate protein, heavy...    47   5e-04
tr|Q4CS72|Q4CS72_TRYCR Protein kinase C substrate protein, heavy...    47   7e-04
tr|B6K4H4|B6K4H4_SCHJP Glucosidase 2 subunit beta OS=Schizosacch...    47   7e-04

>tr|A8WP81|A8WP81_CAEBR Putative uncharacterized protein
           OS=Caenorhabditis briggsae GN=CBG00964 PE=4 SV=1
          Length = 506

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 26/60 (43%), Positives = 35/60 (58%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEGGDASKQVLPTKAAREVIVTDSRKSFLSEHE 182
           RVND +CDCCDGSDEY+  ++C  +C+E G  A       +  RE I + +RK F    E
Sbjct: 99  RVNDKLCDCCDGSDEYDSGVECPNICDELGRAA-------RIEREKIASVARKGFQKRQE 151


>tr|B3S3S3|B3S3S3_TRIAD Putative uncharacterized protein
           OS=Trichoplax adhaerens GN=TRIADDRAFT_64136 PE=4 SV=1
          Length = 514

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEG 92
           RVND ICDCCDG+DEY+GK+ C+  C+E G
Sbjct: 102 RVNDGICDCCDGTDEYDGKISCQNTCDEVG 131


>tr|Q8LDD0|Q8LDD0_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 647

 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEGGDASKQVLPTK 125
           RVND ICDCCDGSDEY+G++ C+  C  E G A+++ L  K
Sbjct: 108 RVNDGICDCCDGSDEYDGQVSCQXTC-WEAGKAARENLKKK 147


>tr|B8A034|B8A034_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 613

 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 24/43 (55%), Positives = 29/43 (67%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEGGDASKQVLPTKAA 131
           RVND ICDCCDGSDEY+  + CK  C  E G A+++ L  K A
Sbjct: 95  RVNDGICDCCDGSDEYDSNITCKNTC-WEAGKAAREKLKKKVA 136


>tr|A7P0C1|A7P0C1_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024849001
           PE=4 SV=1
          Length = 574

 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEG 92
           RVND ICDCCDGSDEY+GK++C   C E G
Sbjct: 108 RVNDGICDCCDGSDEYDGKVKCPNTCWEAG 137


>tr|A8Q3R5|A8Q3R5_BRUMA Protein kinase C substrate 80K-H, putative
           OS=Brugia malayi GN=Bm1_42055 PE=4 SV=1
          Length = 329

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEGGDASKQV 113
           RVND ICDCCDGSDE++  ++C  +CNE G    +++
Sbjct: 114 RVNDQICDCCDGSDEWDSAVECPDICNELGAKYREEI 150


>tr|A7SJQ2|A7SJQ2_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g245724 PE=4 SV=1
          Length = 532

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNE 86
           RVND ICDCCDGSDEY+GK+ C   C E
Sbjct: 100 RVNDGICDCCDGSDEYDGKVNCPDTCKE 127


>tr|Q5NBP9|Q5NBP9_ORYSJ cDNA clone:J033114E08, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0038F12.26 PE=2 SV=1
          Length = 614

 Score = 51.6 bits (122), Expect = 3e-05
 Identities = 24/43 (55%), Positives = 28/43 (65%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEGGDASKQVLPTKAA 131
           RVND ICDCCDGSDEY+  + CK  C  E G A++  L  K A
Sbjct: 97  RVNDGICDCCDGSDEYDSNVTCKNTC-WEAGKAARDKLKKKVA 138


>tr|A9SLW4|A9SLW4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_62870 PE=4 SV=1
          Length = 555

 Score = 51.6 bits (122), Expect = 3e-05
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEGGDASKQVL 116
           RVND ICDCCDGSDEYNG ++C   C  + G AS++ L
Sbjct: 105 RVNDGICDCCDGSDEYNGFVECPNTC-WDAGKASREKL 141


>tr|A9NKT5|A9NKT5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 227

 Score = 51.6 bits (122), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 27/38 (71%)
 Frame = +3

Query: 3   RVNDVICDCCDGSDEYNGKMQCKPVCNEEGGDASKQVL 116
           RVND ICDCCDGSDEY GK++C   C + G   + ++L
Sbjct: 103 RVNDGICDCCDGSDEYYGKIRCPNTCRKAGKAVTGKLL 140