DK950911
Clone id TST38A01NGRL0009_P14
Library
Length 603
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_P14. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
ATGGCTCTGGCTGAAGTGGTGGCCGCGGCGCCTGACTCGGCTCACCATACAGGTGATCCG
GTTCGGACTATGGGTGGTGGTTTCAAAGGGGACCTACCTCAGGAACATGTTTCCGACGAC
AAGAATGGGGATGCTACTCAGTTTAAAAGATTAGATGGAGCAGCTGAAGCGGCCAATGCT
GGCTATAGTATACCTGTCTTGGCAAGCTATGATGGAGGTGTGGGATGTGATACAAGACAC
GTATTCTCTGGCATGCTTGCTGAGAATGGGCAGTCTATGTACTATGCCCCTGGTTATGAG
TTTCCACAGCAATCTCCTTATTGCTCACAGCCTCAAGGGGCTTACATGTCAAATATGGGA
TCTGGAACAACGGGGTACTGTGGACCGCAGTATGGGCCTTATTATCAGCAGGTGCCACCT
GGGCTTATGCAGTATTACCCTGCAGAGCAAGAAGTGACGAAGGCTGGAGCCAAGAAGCTG
AATGTAAAGGATTGTACCCAAAATGCTAAGGCCAAACCTGGAGTGCCAGGAAAGCCAGGC
TATCAGGCTGGACACAAAAGCATACTGCCTGATGCTTCTAATCATTGGNGGACTTTACCC
AGC
■■Homology search results ■■ -
sp_hit_id Q9W4E2
Definition sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster
Align length 115
Score (bit) 33.9
E-value 0.65
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950911|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_P14, 5'
(603 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=... 34 0.65
sp|Q7XWS7|FH12_ORYSJ Formin-like protein 12 OS=Oryza sativa subs... 31 4.2
sp|Q6UXD1|HRCT1_HUMAN Histidine-rich carboxyl terminus protein 1... 31 5.5
sp|P40411|FEUC_BACSU Iron-uptake system permease protein feuC OS... 30 7.2
sp|P21409|FBPB_SERMA Fe(3+)-transport system permease protein sf... 30 7.2
sp|P06175|FLIC_SALRU Flagellin OS=Salmonella rubislaw GN=fliC PE... 30 7.3
sp|P18292|THRB_RAT Prothrombin OS=Rattus norvegicus GN=F2 PE=1 SV=1 30 9.4
sp|Q8RFK2|MUTS_FUSNN DNA mismatch repair protein mutS OS=Fusobac... 30 9.5
sp|Q26614|FGFR_STRPU Fibroblast growth factor receptor OS=Strong... 30 9.5

>sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg
PE=1 SV=2
Length = 3584

Score = 33.9 bits (76), Expect = 0.65
Identities = 34/115 (29%), Positives = 45/115 (39%)
Frame = -3

Query: 388 AVHSTPLFQIPYLTCKPLEAVSNKEIAVETHNQGHST*TAHSQQACQRIRVLYHIPHLHH 209
A HST T +P + S +A ++ Q H H QQ Q+ + PH H
Sbjct: 2071 ATHSTSSSASSTATSQPASSSSLSSLASQSQQQSHR--QLHKQQQQQQQQQQQQQPHYH- 2127

Query: 208 SLPRQVYYSQHWPLQLLHLIF*TE*HPHSCRRKHVPEVGPL*NHHP*SEPDHLYG 44
P Q +Y LI + HP KH E G +HP S P H +G
Sbjct: 2128 --PHQPHYG---------LINGHQQHP-QLNGKHYAENGSTAGYHPHSHP-HPHG 2169


>sp|Q7XWS7|FH12_ORYSJ Formin-like protein 12 OS=Oryza sativa subsp.
japonica GN=FH12 PE=3 SV=3
Length = 1669

Score = 31.2 bits (69), Expect = 4.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3

Query: 79 HHP*SEPDHLYGEPSQAPRPPLQPEP 2
HHP P +L GE AP PP P P
Sbjct: 1043 HHPPERPHYLPGEVGGAPSPPSPPPP 1068


>sp|Q6UXD1|HRCT1_HUMAN Histidine-rich carboxyl terminus protein 1
OS=Homo sapiens GN=HRCT1 PE=2 SV=1
Length = 115

Score = 30.8 bits (68), Expect = 5.5
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3

Query: 196 QVYYSQHWPLQLLHLIF*TE*HPHSCRRKHVPEVGPL*NHHP*SEPDHLY 47
+V +Q WP + + H H HVP VG +HHP P HL+
Sbjct: 52 RVRRAQPWPFRRRGHLGIFHHHRHPGHVSHVPNVGLHHHHHPRHTPHHLH 101


>sp|P40411|FEUC_BACSU Iron-uptake system permease protein feuC
OS=Bacillus subtilis GN=feuC PE=1 SV=2
Length = 394

Score = 30.4 bits (67), Expect = 7.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3

Query: 360 IWNNGVLWTAVWALLSAGATWAYAVLP 440
+W NG +W+A W ++A W +P
Sbjct: 182 VWKNGSIWSANWTYITAVLPWMLLFIP 208


>sp|P21409|FBPB_SERMA Fe(3+)-transport system permease protein sfuB
OS=Serratia marcescens GN=fbpB PE=3 SV=2
Length = 527

Score = 30.4 bits (67), Expect = 7.2
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3

Query: 306 TAISL---LLTASRGLHVK-YGIWNNGVLWTAVWALLSAGATWAYAVLPC 443
TA++L +T +R L + + +W N LW A+W LS A A + C
Sbjct: 295 TALALGVPFITLARWLWLGGFEVWRNAELWPALWQTLSLSAAGALLITLC 344


>sp|P06175|FLIC_SALRU Flagellin OS=Salmonella rubislaw GN=fliC PE=3
SV=2
Length = 493

Score = 30.4 bits (67), Expect = 7.3
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = +1

Query: 13 EVVAAAPDSAHHTGDPVRTMGGGFKGDLPQE-HVSDDKNGDATQFKRLDGAAEAANAGYS 189
EV AA TG P + GF ++ + +N D T+ K AA A AG+
Sbjct: 244 EVTVAADGKVTLTGTPTGPITAGFPSTATKDVKQTQQENADLTEAKAALTAAGVAAAGHR 303

Query: 190 IPVLASYDGGVGCDTRHVFSGMLAENGQSMYYA 288
V SY G + + G+ + G Y A
Sbjct: 304 SVVKMSYTDNNG---KTIDGGLAVKVGDDYYSA 333


>sp|P18292|THRB_RAT Prothrombin OS=Rattus norvegicus GN=F2 PE=1 SV=1
Length = 617

Score = 30.0 bits (66), Expect = 9.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2

Query: 278 CTMPLVMSFHSNLLIAHSLKGLTCQIW 358
C M L +++H N+ + H+ G+ CQ+W
Sbjct: 109 CAMDLGLNYHGNVSVTHT--GIECQLW 133


>sp|Q8RFK2|MUTS_FUSNN DNA mismatch repair protein mutS
OS=Fusobacterium nucleatum subsp. nucleatum GN=mutS PE=3
SV=1
Length = 896

Score = 30.0 bits (66), Expect = 9.5
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -1

Query: 321 IRRLLWKLITRGIVHRLPILSKHAREYVSCITSHTSIIACQDRYTIASIGRFS 163
++R + ++IT G + + L K+ Y++CI +T+ YT + G FS
Sbjct: 119 VKREVTRVITPGTIIDVDFLDKNNNNYIACIKINTTENIVAIAYTDITTGEFS 171


>sp|Q26614|FGFR_STRPU Fibroblast growth factor receptor
OS=Strongylocentrotus purpuratus GN=FGFR PE=2 SV=1
Length = 972

Score = 30.0 bits (66), Expect = 9.5
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +1

Query: 85 KGDLPQEHVSDDKNGDA---TQFKRLDGAAEAANAGYSIPVLASYDGGVGCDTRHVFSGM 255
K D PQ+ + +A T K L G + GY + + G GC+ + + G
Sbjct: 54 KPDAPQDLTAIPVKAEAIVLTWKKPLKGQTD----GYIVVYCLKRNKGNGCERQKIEGGN 109

Query: 256 LAENGQSMYYAPG-YEFPQQSPYCSQPQGA 342
+ E + YA Y+F QS Y P+GA
Sbjct: 110 VTEVEVTNLYANHTYQFQVQSWYSDHPKGA 139


tr_hit_id B4N2C7
Definition tr|B4N2C7|B4N2C7_DROWI GK16142 OS=Drosophila willistoni
Align length 115
Score (bit) 38.5
E-value 0.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950911|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_P14, 5'
(603 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4N2C7|B4N2C7_DROWI GK16142 OS=Drosophila willistoni GN=GK161... 39 0.30
tr|A9GRK7|A9GRK7_SORC5 Putative uncharacterized protein OS=Soran... 36 1.5
tr|B4LKR2|B4LKR2_DROVI GJ20116 OS=Drosophila virilis GN=GJ20116 ... 36 2.0
tr|B4KYB6|B4KYB6_DROMO GI12500 OS=Drosophila mojavensis GN=GI125... 36 2.0
tr|A1CP48|A1CP48_ASPCL Putative uncharacterized protein OS=Asper... 35 2.6
tr|A6N3K6|A6N3K6_9PLAN Polysulfide reductase subunit C (Fragment... 35 3.4
tr|B4J7V6|B4J7V6_DROGR GH20604 OS=Drosophila grimshawi GN=GH2060... 35 3.4
tr|B7FSP6|B7FSP6_PHATR Predicted protein OS=Phaeodactylum tricor... 35 4.4
tr|B4KQW7|B4KQW7_DROMO GI20446 OS=Drosophila mojavensis GN=GI204... 35 4.4
tr|A8JCM8|A8JCM8_CHLRE SM/Sec1-family protein OS=Chlamydomonas r... 35 4.4
tr|B4N5E4|B4N5E4_DROWI GK20557 OS=Drosophila willistoni GN=GK205... 34 5.7
tr|Q7Q6Z2|Q7Q6Z2_ANOGA AGAP005595-PA OS=Anopheles gambiae GN=AGA... 34 5.8
tr|B3EQ74|B3EQ74_CHLPB PGAP1 family protein OS=Chlorobium phaeob... 34 7.5
tr|B7S0S4|B7S0S4_9GAMM Putative exonuclease, RdgC superfamily OS... 34 7.5
tr|Q0KHV9|Q0KHV9_DROME Rugose, isoform C OS=Drosophila melanogas... 34 7.5
tr|B7Z0X3|B7Z0X3_DROME Rugose, isoform D OS=Drosophila melanogas... 34 7.5
tr|B7Z0W8|B7Z0W8_DROME Rugose, isoform F OS=Drosophila melanogas... 34 7.5
tr|Q4N672|Q4N672_THEPA Putative uncharacterized protein OS=Theil... 34 7.6
tr|Q17LV8|Q17LV8_AEDAE Myelin transcription factor 1, myt1 OS=Ae... 33 9.9
tr|A7S4H3|A7S4H3_NEMVE Predicted protein OS=Nematostella vectens... 33 9.9

>tr|B4N2C7|B4N2C7_DROWI GK16142 OS=Drosophila willistoni GN=GK16142
PE=4 SV=1
Length = 809

Score = 38.5 bits (88), Expect = 0.30
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Frame = -3

Query: 325 SNKEIAVETHNQGHST*TAHSQQACQRIRVLYHIPHLHHS-----LPRQVYYSQHWPLQL 161
+N + V+ H Q H+T H A +H+ H HH+ P ++ H +
Sbjct: 170 TNSAVNVKPHTQFHNTLAHHMTVAHHAAAAAHHV-HAHHAPHPHPHPHHSHHHHHHHAAM 228

Query: 160 LHLIF*T--E*HPHSCRRKHVPEVGPL*NHHP*SEPDHLYGEPSQAPRPPLQPEP 2
H + HPH+ HVP VG + + P P P P L P+P
Sbjct: 229 AHHLLANGFHPHPHALALAHVPVVGGQQSTAAVAPP-----APPTLPPPTLMPQP 278


>tr|A9GRK7|A9GRK7_SORC5 Putative uncharacterized protein
OS=Sorangium cellulosum (strain So ce56) GN=sce3477 PE=4
SV=1
Length = 486

Score = 36.2 bits (82), Expect = 1.5
Identities = 36/127 (28%), Positives = 42/127 (33%), Gaps = 8/127 (6%)
Frame = +1

Query: 10 AEVVAAAPDSAHHTGDPVRTMGGGFKG--DLP------QEHVSDDKNGDATQFKRLDGAA 165
+ VV P H DP R G D P EHV D G GA
Sbjct: 27 SSVVFPEPSPQHAPVDPPRDEEAADVGSPDRPVARSGTAEHVVDVPAGGGADVPNSGGAD 86

Query: 166 EAANAGYSIPVLASYDGGVGCDTRHVFSGMLAENGQSMYYAPGYEFPQQSPYCSQPQGAY 345
A G +P GGVG F G +G Y PG +P +S G Y
Sbjct: 87 VPAGGGADVP----NGGGVGDRCAGPFPGEEPRDGSGYYLKPGLLYPAES------SGVY 136

Query: 346 MSNMGSG 366
M + G
Sbjct: 137 MGQLSLG 143


>tr|B4LKR2|B4LKR2_DROVI GJ20116 OS=Drosophila virilis GN=GJ20116
PE=4 SV=1
Length = 793

Score = 35.8 bits (81), Expect = 2.0
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Frame = -3

Query: 217 LHHSLPRQVYYSQHWPLQLLHLIF*TE*HPHSCRRKHVPEVGPL*NHHP*SEPDHLYGEP 38
L H P Y ++ P H + E P H P P+ HP + P HL+G P
Sbjct: 210 LDHRRPPIDPYDRYGPPIHPHAVHPREYRPMHHEYPHPPRGPPMHRGHPHAHPHHLHGHP 269

Query: 37 ---SQAPRPPLQPEP 2
AP P+ P P
Sbjct: 270 PPHQYAPMRPMAPRP 284


>tr|B4KYB6|B4KYB6_DROMO GI12500 OS=Drosophila mojavensis GN=GI12500
PE=4 SV=1
Length = 788

Score = 35.8 bits (81), Expect = 2.0
Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Frame = -3

Query: 469 LQPSSLLALQGNTA*AQVAPADNKAHT------------AVHSTPL--FQIPYLTCKPLE 332
+ P + L L G+ A DN A T A+ T L F P L+ P+E
Sbjct: 251 IDPENALMLSGS---AVANGGDNAAATQQQQLLPQVKMEAIDETLLETFSTPMLS--PME 305

Query: 331 AVSNKEIAVETHNQGHST*TAHSQQACQRIRVLYHIPHLHHSLPRQVYYSQHWPLQLLHL 152
+ K+ + H H QQ Q + YH H Q +Y QH+ Q HL
Sbjct: 306 IKTEKQQRQQQQQHQHQQQQQHQQQQQQHQQQQYHQQQQHQQQQHQQHYQQHYQQQQQHL 365


>tr|A1CP48|A1CP48_ASPCL Putative uncharacterized protein
OS=Aspergillus clavatus GN=ACLA_021280 PE=4 SV=1
Length = 122

Score = 35.4 bits (80), Expect = 2.6
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1

Query: 268 GQSMYYAPGYEFPQQSPYCSQPQ-GAYMSNMGSGTT 372
GQ MYY P +PQQ PY Q Q G Y G G++
Sbjct: 65 GQPMYYPPPQGYPQQQPYPPQQQPGYYADERGGGSS 100


>tr|A6N3K6|A6N3K6_9PLAN Polysulfide reductase subunit C (Fragment)
OS=planctomycete Zi62 GN=psrC PE=4 SV=1
Length = 308

Score = 35.0 bits (79), Expect = 3.4
Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 4/106 (3%)
Frame = +2

Query: 5 LWLKWWPRRLTRLTIQVIRFGLWVVVSKGTYLRNMFPTTRMGMLLSLKD*MEQLKRPMLA 184
L L WP+ + L LW V + TY GM+ L ++ K P+L
Sbjct: 72 LQLSMWPQFRSPL--------LWDVFAVSTYATVSVIFWYTGMIPDLATLRDRTKNPILR 123

Query: 185 IVY----LSWQAMMEVWDVIQDTYSLACLLRMGSLCTMPLVMSFHS 310
IVY L W W + Y+L L PLV+S H+
Sbjct: 124 IVYSVLSLGWTGSARKWSRYEKAYTLFAAL------AAPLVLSVHT 163


>tr|B4J7V6|B4J7V6_DROGR GH20604 OS=Drosophila grimshawi GN=GH20604
PE=4 SV=1
Length = 793

Score = 35.0 bits (79), Expect = 3.4
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Frame = -3

Query: 217 LHHSLPRQVYYSQHWPLQLLHLIF*TE*HPHSCRRKHVPEVGPL*NHHP*SEPDHLYGEP 38
L H P Y ++ P H E P H P P+ HP + P HL+G P
Sbjct: 210 LDHRRPPVDPYDRYGPPLHPHAAHPREYRPMHHEYPHPPRGPPMHRGHPHTHPHHLHGHP 269

Query: 37 ---SQAPRPPLQPEP 2
AP P+ P P
Sbjct: 270 PPHQYAPMRPMAPRP 284


>tr|B7FSP6|B7FSP6_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATRDRAFT_43574 PE=4 SV=1
Length = 499

Score = 34.7 bits (78), Expect = 4.4
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2

Query: 197 SWQAMMEVWDVIQDTYSLACLLRM-GSLCTMPLVMSFHSNLLIAHSLKGLTCQIWDLEQR 373
SW ++VWD+ + CLL + GS L S+HS+ ++A T ++WD+
Sbjct: 347 SWDHSLKVWDMERQD----CLLTLNGSRVVSCLDTSYHSSGIVATGHPDCTVRLWDVRID 402

Query: 374 GTVDRSMGL 400
T + S+ L
Sbjct: 403 ATNESSLAL 411


>tr|B4KQW7|B4KQW7_DROMO GI20446 OS=Drosophila mojavensis GN=GI20446
PE=4 SV=1
Length = 791

Score = 34.7 bits (78), Expect = 4.4
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Frame = -3

Query: 217 LHHSLPRQVYYSQHWPLQLLHLIF*TE*HPHSCRRKHVPEVGPL*NHHP*SEPDHLYGEP 38
L H P Y ++ P H + E P H P P+ HP + P H++G P
Sbjct: 210 LDHRRPPIDPYDRYGPPIHPHSVHPREYRPMHHEYPHPPRGPPIHRGHPHAHPHHMHGHP 269

Query: 37 ---SQAPRPPLQPEP 2
AP P+ P P
Sbjct: 270 PPHQYAPMRPMAPRP 284


>tr|A8JCM8|A8JCM8_CHLRE SM/Sec1-family protein OS=Chlamydomonas
reinhardtii GN=VPS45 PE=4 SV=1
Length = 620

Score = 34.7 bits (78), Expect = 4.4
Identities = 36/113 (31%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Frame = +1

Query: 49 TGDPVRTMGGGFKGDLPQEHVSDDKNGDATQFKRL-----DGAAEAANAGYSIPVLASYD 213
TGD V T+ K P+E + G + + D A AANAG +P AS
Sbjct: 505 TGDEVATLTANAKRAPPREVIVFVLGGTTYEEAKAVAEMNDRANAAANAGPGVPAGASPS 564

Query: 214 GGVGCDTRHVFSGMLAENGQSMYYA--PGYEFPQQSPYCSQPQGAYMSNMGSG 366
GG R V G N Q A G PQ + QGA +++ GSG
Sbjct: 565 GGQLPTPRVVLGGTGILNSQMFLSALTSGLNIPQSA------QGAGVTSSGSG 611