DK950923 |
Clone id |
TST38A01NGRL0010_A05 |
Library |
TST38 |
Length |
694 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_A05. 5' end sequence. |
Accession |
DK950923 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3539Contig1 |
Sequence |
CATGCCTACTTGGAAAGGGAGATAGAGCTTGCGCTTTTCGAGCTACTTGCGTGAATTAGA GTACTGTACGCGAGAACGCGAGAGAGAGAGAGAGAGAGATGGGCGATAGCGAGGAGCCCG TGCCTGTGTATTCGTCTGTTGAGGCAGTTTATGGGGACGGAGCTCAGGCAGAAGAGGCCC TCTTCCGATACAATCAGCTCAAGTCCAGGTTCGCCCAATTGTATGGTCGTGATCCTGTGC TGTTTGCACGCGCTCCTGGTCGGGTCAATTTGATTGGAGAACACATTGATTATGAGGGCT ATTCCGTTTTGCCCATGGCAATTCGCCAAGACACCATAGTAGCAATTTGCAAGCGTGAAC CTTCAGAAGGTCCTGGAGAGATACGCATAGCAAACCTGCATCCTGATAAATACGAGCCCT TCTCTTTCACAACAGACGTTCAACAGGACATCGATGTGGAGAGACTTGTGTGGGCACACT ATTTCATTTGTGGGTACATTGGAGTGTTTGAGTATTTTGCAAGCAAGGGGATCAACATTG GGCCTCCTTATGGATTGAATGTCTTGATTGATGGCACTGTTCTGCCAGGTTCTGGATTGT CTAGCTCAGCAGCACTGGTATGCTCTTCTGCAATTGCAATTTTTTCCGTGTTGGGCTTTT ATTTCCCCAAGAAGGAAGTAGCTGAGTTTGCCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SEE5 |
Definition |
sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana |
Align length |
192 |
Score (bit) |
181.0 |
E-value |
4.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950923|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_A05, 5' (694 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=G... 181 4e-45 sp|Q68FH4|GALK2_MOUSE N-acetylgalactosamine kinase OS=Mus muscul... 102 2e-21 sp|Q5XIG6|GALK2_RAT N-acetylgalactosamine kinase OS=Rattus norve... 101 3e-21 sp|Q01415|GALK2_HUMAN N-acetylgalactosamine kinase OS=Homo sapie... 101 4e-21 sp|Q5R6J8|GALK2_PONAB N-acetylgalactosamine kinase OS=Pongo abel... 99 2e-20 sp|Q54DN6|GALK_DICDI Galactokinase OS=Dictyostelium discoideum G... 87 1e-16 sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GA... 80 8e-15 sp|Q9HDU2|GAL1_SCHPO Galactokinase OS=Schizosaccharomyces pombe ... 79 3e-14 sp|P09608|GAL1_KLULA Galactokinase OS=Kluyveromyces lactis GN=GA... 77 7e-14 sp|P56599|GAL1_CANMA Galactokinase (Fragment) OS=Candida maltosa... 69 3e-11 sp|P56091|GAL1_CANAL Galactokinase OS=Candida albicans GN=GAL1 P... 68 5e-11 sp|Q9KRP1|GAL1_VIBCH Galactokinase OS=Vibrio cholerae GN=galK PE... 63 1e-09 sp|P04385|GAL1_YEAST Galactokinase OS=Saccharomyces cerevisiae G... 63 2e-09 sp|P13045|GAL3_YEAST Protein GAL3 OS=Saccharomyces cerevisiae GN... 61 5e-09 sp|A7MV01|GAL1_VIBHB Galactokinase OS=Vibrio harveyi (strain ATC... 61 6e-09 sp|Q896X8|GAL1_CLOTE Galactokinase OS=Clostridium tetani GN=galK... 60 1e-08 sp|A0KQH8|GAL1_AERHH Galactokinase OS=Aeromonas hydrophila subsp... 59 2e-08 sp|Q8DBN9|GAL1_VIBVU Galactokinase OS=Vibrio vulnificus GN=galK ... 59 2e-08 sp|Q87M60|GAL1_VIBPA Galactokinase OS=Vibrio parahaemolyticus GN... 59 3e-08 sp|Q7MI80|GAL1_VIBVY Galactokinase OS=Vibrio vulnificus (strain ... 58 4e-08 sp|A8GBA5|GAL1_SERP5 Galactokinase OS=Serratia proteamaculans (s... 58 4e-08 sp|Q0TQU5|GAL1_CLOP1 Galactokinase OS=Clostridium perfringens (s... 57 9e-08 sp|A6M1P8|GAL1_CLOB8 Galactokinase OS=Clostridium beijerinckii (... 57 9e-08 sp|Q9K3S8|GAL1_STRCO Galactokinase OS=Streptomyces coelicolor GN... 57 1e-07 sp|O84902|GAL1_LACCA Galactokinase OS=Lactobacillus casei GN=gal... 56 2e-07 sp|P39574|GAL1_BACSU Galactokinase OS=Bacillus subtilis GN=galK ... 56 2e-07 sp|Q9RGS1|GAL1_STACA Galactokinase OS=Staphylococcus carnosus GN... 56 2e-07 sp|Q0ST92|GAL1_CLOPS Galactokinase OS=Clostridium perfringens (s... 55 5e-07 sp|Q8XKP9|GAL1_CLOPE Galactokinase OS=Clostridium perfringens GN... 55 5e-07 sp|Q836P0|GAL1_ENTFA Galactokinase OS=Enterococcus faecalis GN=g... 54 6e-07
>sp|Q9SEE5|GALK1_ARATH Galactokinase OS=Arabidopsis thaliana GN=GAL1 PE=2 SV=2 Length = 496
Score = 181 bits (458), Expect = 4e-45 Identities = 94/192 (48%), Positives = 125/192 (65%) Frame = +3
Query: 111 EEPVPVYSSVEAVYGDGAQAEEALFRYNQLKSRFAQLYGRDPVLFARAPGRVNLIGEHID 290 E VP+++S+E VYG+G+ +EA R++ LK+ F ++G P LFAR+PGRVNLIGEHID Sbjct: 6 EVSVPIFTSLEPVYGEGSLLQEATQRFDVLKANFNDVFGASPQLFARSPGRVNLIGEHID 65
Query: 291 YEGYSVLPMAIRQDTIVAICKREPSEGPGEIRIANLHPDKYEPFSFTTDVQQDIDVERLV 470 YEGYSVLPMAIRQDTI+AI K E + ++RIAN++ DKY ++ D Q+ID++ Sbjct: 66 YEGYSVLPMAIRQDTIIAIRKCEDQK---QLRIANVN-DKYTMCTYPADPDQEIDLKNHK 121
Query: 471 WAHYFICGYIGVFEYFASKGINIGPPYGLNVLIDGTVLPXXXXXXXXXXXXXXXXXXFSV 650 W HYFIC Y G EY SKG+N+G P GL+VL+DG V +V Sbjct: 122 WGHYFICAYKGFHEYAKSKGVNLGSPVGLDVLVDGIVPTGSGLSSSAAFVCSATIAIMAV 181
Query: 651 LGFYFPKKEVAE 686 G F KKE+A+ Sbjct: 182 FGHNFEKKELAQ 193
>sp|Q68FH4|GALK2_MOUSE N-acetylgalactosamine kinase OS=Mus musculus GN=Galk2 PE=2 SV=1 Length = 458
Score = 102 bits (254), Expect = 2e-21 Identities = 65/167 (38%), Positives = 92/167 (55%) Frame = +3
Query: 186 RYNQLKSRFAQLYGRDPVLFARAPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAICKREPS 365 R +LK F +G P + RAPGRVN+IGEHIDY GYSV+PMA+ QD ++A+ EP Sbjct: 18 RLLKLKEMFNSKFGSTPKFYVRAPGRVNIIGEHIDYCGYSVIPMAVEQDMLIAV---EPV 74
Query: 366 EGPGEIRIANLHPDKYEPFSFTTDVQQDIDVERLVWAHYFICGYIGVFEYFASKGINIGP 545 + +++AN P Y FS TT ID + +W +YF+CG+ G+ E+F G++ P Sbjct: 75 K-THTLQLANTDP-LYPDFS-TTANNICIDKTKPLWHNYFLCGFKGIQEHF---GLSKLP 128
Query: 546 PYGLNVLIDGTVLPXXXXXXXXXXXXXXXXXXFSVLGFYFPKKEVAE 686 G+N L+DG + P +VLG K E+AE Sbjct: 129 --GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGLRLSKVELAE 173
>sp|Q5XIG6|GALK2_RAT N-acetylgalactosamine kinase OS=Rattus norvegicus GN=Galk2 PE=2 SV=1 Length = 458
Score = 101 bits (252), Expect = 3e-21 Identities = 66/170 (38%), Positives = 91/170 (53%), Gaps = 3/170 (1%) Frame = +3
Query: 186 RYNQLKSRFAQLYGRDPVLFARAPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAICKREPS 365 R +LK F +G P + RAPGRVN+IGEHIDY GYSVLPMA+ QD ++A+ Sbjct: 18 RLLKLKEMFNSKFGSTPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDMLIAV------ 71
Query: 366 EGPGE---IRIANLHPDKYEPFSFTTDVQQDIDVERLVWAHYFICGYIGVFEYFASKGIN 536 GP + +++AN P Y FS TT ID + +W +YF+CG+ G+ E+F G+ Sbjct: 72 -GPVKTQTLQLANTDP-LYPDFS-TTANNICIDKTQPLWHNYFLCGFKGIQEHF---GLT 125
Query: 537 IGPPYGLNVLIDGTVLPXXXXXXXXXXXXXXXXXXFSVLGFYFPKKEVAE 686 P G+N L+DG + P +VLG K E+AE Sbjct: 126 QLP--GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGMRLSKVELAE 173
>sp|Q01415|GALK2_HUMAN N-acetylgalactosamine kinase OS=Homo sapiens GN=GALK2 PE=1 SV=1 Length = 458
Score = 101 bits (251), Expect = 4e-21 Identities = 63/167 (37%), Positives = 90/167 (53%) Frame = +3
Query: 186 RYNQLKSRFAQLYGRDPVLFARAPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAICKREPS 365 R +LK F +G P + RAPGRVN+IGEHIDY GYSVLPMA+ QD ++A+ EP Sbjct: 18 RLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAV---EPV 74
Query: 366 EGPGEIRIANLHPDKYEPFSFTTDVQQDIDVERLVWAHYFICGYIGVFEYFASKGINIGP 545 + +++AN +P Y FS + + Q ID + +W +YF+CG G+ E+F + Sbjct: 75 K-TYALQLANTNP-LYPDFSTSANNIQ-IDKTKPLWHNYFLCGLKGIQEHFGLSNLT--- 128
Query: 546 PYGLNVLIDGTVLPXXXXXXXXXXXXXXXXXXFSVLGFYFPKKEVAE 686 G+N L+DG + P +VLG K E+AE Sbjct: 129 --GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAE 173
>sp|Q5R6J8|GALK2_PONAB N-acetylgalactosamine kinase OS=Pongo abelii GN=GALK2 PE=2 SV=1 Length = 458
Score = 99.4 bits (246), Expect = 2e-20 Identities = 60/167 (35%), Positives = 89/167 (53%) Frame = +3
Query: 186 RYNQLKSRFAQLYGRDPVLFARAPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAICKREPS 365 R +LK F +G P + RAPGRVN+IGEHIDY GYSVLPMA+ QD ++A+ EP Sbjct: 18 RLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAV---EPV 74
Query: 366 EGPGEIRIANLHPDKYEPFSFTTDVQQDIDVERLVWAHYFICGYIGVFEYFASKGINIGP 545 + +++AN +P + + ++Q ID + +W +YF+CG G+ E+F + Sbjct: 75 K-TYTLQLANTNPLYPDLSTSANNIQ--IDKTKPLWHNYFLCGLKGIQEHFGVSNLT--- 128
Query: 546 PYGLNVLIDGTVLPXXXXXXXXXXXXXXXXXXFSVLGFYFPKKEVAE 686 G+N L+DG + P +VLG K E+AE Sbjct: 129 --GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAE 173
>sp|Q54DN6|GALK_DICDI Galactokinase OS=Dictyostelium discoideum GN=galK PE=3 SV=1 Length = 501
Score = 86.7 bits (213), Expect = 1e-16 Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 5/137 (3%) Frame = +3
Query: 186 RYNQLKSRFAQLYGRD-PVLFARAPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAICKREP 362 RY +L F+++Y D P+ + RAPGRVNLIGEH+DY GY VLP A+ QDTIVA+ + Sbjct: 28 RYEELNETFSKIYNGDKPIFYFRAPGRVNLIGEHVDYSGYCVLPFALEQDTIVAVSFNKL 87
Query: 363 SEGPGEIRIANLH--PDKYEPFSFTTDVQQD--IDVERLVWAHYFICGYIGVFEYFASKG 530 + I N+H +KY P S D ID++R W +Y + + GV + KG Sbjct: 88 NND-----IINIHNCNEKYTPKSIDVSGGGDIEIDMKRHHWTNYVLAAWKGVSQAM-EKG 141
Query: 531 INIGPPYGLNVLIDGTV 581 G +N+L G V Sbjct: 142 ---GKLKSVNLLYSGNV 155
>sp|O42821|GAL1_CANPA Galactokinase OS=Candida parapsilosis GN=GAL1 PE=3 SV=1 Length = 504
Score = 80.5 bits (197), Expect = 8e-15 Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 1/133 (0%) Frame = +3
Query: 186 RYNQLKSRFAQLYGRDPV-LFARAPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAICKREP 362 RY L F Y D + FAR+PGRVNLIG+HIDY + VLPMAI D + A+ Sbjct: 21 RYANLVKTFKSKYPNDEIEFFARSPGRVNLIGDHIDYNYFPVLPMAIEVDVVAAV----S 76
Query: 363 SEGPGEIRIANLHPDKYEPFSFTTDVQQDIDVERLVWAHYFICGYIGVFEYFASKGINIG 542 + I IAN K+ + + + ID E WA+YF CG I ++ K + Sbjct: 77 TNNNDMIVIANTDSAKFPKETVSLAEEFTIDREHHTWANYFKCGLIVASKFLQEKAMT-- 134
Query: 543 PPYGLNVLIDGTV 581 G+N+ GTV Sbjct: 135 KLKGMNITFSGTV 147
>sp|Q9HDU2|GAL1_SCHPO Galactokinase OS=Schizosaccharomyces pombe GN=gal1 PE=2 SV=1 Length = 519
Score = 78.6 bits (192), Expect = 3e-14 Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 7/139 (5%) Frame = +3
Query: 186 RYNQLKSRFAQLYGRDPVLFARAPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAICKREPS 365 RY +L + F Q Y P F+R+PGRVN+IGEHIDY +SVLPMAI D IV++ + + Sbjct: 22 RYAKLLNSFEQKYHCKPDFFSRSPGRVNIIGEHIDYNYFSVLPMAIDVDVIVSVTTSDDA 81
Query: 366 EGPGEIRIANLHPD-KYEPFSFTTD-VQQDIDVERLVWAHYFICGYIGVFEYFASKGINI 539 ++ + N +P+ K E +D +I+ W +YF C I +Y K + Sbjct: 82 ----KVELNNTNPEFKEEILELPSDGAVIEINKTHHTWGNYFRCSMIVAHKYILEKYPEL 137
Query: 540 -----GPPYGLNVLIDGTV 581 P GL ++ DG V Sbjct: 138 VSGGKKPLKGLKLIFDGNV 156
>sp|P09608|GAL1_KLULA Galactokinase OS=Kluyveromyces lactis GN=GAL1 PE=2 SV=2 Length = 503
Score = 77.4 bits (189), Expect = 7e-14 Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 6/138 (4%) Frame = +3
Query: 186 RYNQLKSRFAQLYGRDP---VLFARAPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAICKR 356 + QLK+ F + Y D R+PGRVNLIGEHIDY +SVLPMAI D ++A Sbjct: 15 KLEQLKNEFVECYDTDDSRKFFITRSPGRVNLIGEHIDYCQFSVLPMAIENDLMLACRLT 74
Query: 357 EPSEGPGEIRIANLHPDKYEPFSFTTDVQQ---DIDVERLVWAHYFICGYIGVFEYFASK 527 SE P I + N H + F + +ID W++YF CG + ++ K Sbjct: 75 SESENP-SITLTN-HDSNFAQRKFDLPLDGSLIEIDPSVSDWSNYFKCGLLVAQQFLQEK 132
Query: 528 GINIGPPYGLNVLIDGTV 581 GP +G+ + + G + Sbjct: 133 YNFKGPVHGMEIYVKGDI 150
>sp|P56599|GAL1_CANMA Galactokinase (Fragment) OS=Candida maltosa GN=GAL1 PE=3 SV=1 Length = 214
Score = 68.6 bits (166), Expect = 3e-11 Identities = 43/107 (40%), Positives = 53/107 (49%), Gaps = 4/107 (3%) Frame = +3
Query: 225 GRDPVLFARAPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAICKREPSEGPGEIRIANLHP 404 G D FAR+PGRVNLIG+HIDY + VLPMAI D I A+ EI I N Sbjct: 35 GDDITFFARSPGRVNLIGDHIDYNFFPVLPMAIANDVIAAV----NVNSTNEIIITNT-- 88
Query: 405 DKYEPFSFTTDV----QQDIDVERLVWAHYFICGYIGVFEYFASKGI 533 + F +V ID E WA+YF C I +Y +G+ Sbjct: 89 ---DSKDFLKEVIALRNSQIDQEHHSWANYFKCALIVAKQYLEERGV 132
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6V3B9 |
Definition |
tr|B6V3B9|B6V3B9_CUCME Galactokinase OS=Cucumis melo |
Align length |
190 |
Score (bit) |
199.0 |
E-value |
1.0e-49 |
Report |
|