DK950935
Clone id TST38A01NGRL0010_A17
Library
Length 683
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_A17. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GTCAACCGCTTCCCCCAACTTAACGACTCAACCTCCTAGGAAAAAGCAACTGAATAGGTG
AATTGAATTTGATAGGAATTGCCGGTATTTGGCGAAAGAAAACTAATTGGAAGCCTATTT
AGGAGAGATTTGGTTTAACTAAGAATTGAATCTCCTGATACTTACCTCATTCAGATGCAG
AAATCTATGATAATACGTAATCCTATTTATGTACGTGAACAAAAAAATCTAGATGTCCGA
CAAGTTGCCCAATCAAACAATAAAGTATAAAAACATAGACATGTTAATAGAAAATCACAT
GTTCCATAACTGGAGAGTAGACATGACAGTCTCGTACAGTATTTATCTAGAAAATTCTCT
TCACTTTGGCGATGCCCTTTTGGCCAAGTTACCCGAAGCTTATGCCATTTTCGATCCAAT
TGTAGACGTAATGCCGGTAATCCCGGTGTTCTTTCTCCTCCTAGCTTTTGTTTGGCAAGC
CGCAGTTAGTTTTCGATAATACCCAAAAGATCGGTTGAATCCAGATTCTGTTGATTCTCA
ACACTTCTCCAATAGCTCTCACAAACGGGGTATAGGTTGGAAAGAAGAAAGTGTGGGGAA
GAGGGGTTTGGATTTCACATAGAAGATTAATGCATATAGAGATGCATGAAAAGAAAGAAA
ATGTAGATTTTGAGCGAGTAAAA
■■Homology search results ■■ -
sp_hit_id Q85FN7
Definition sp|Q85FN7|PSBK_ADICA Photosystem II reaction center protein K OS=Adiantum capillus-veneris
Align length 58
Score (bit) 79.3
E-value 2.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950935|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_A17, 5'
(683 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q85FN7|PSBK_ADICA Photosystem II reaction center protein K OS... 79 2e-14
sp|Q6YXN4|PSBK_PHYPA Photosystem II reaction center protein K OS... 54 8e-07
sp|Q8MA00|PSBK_CHAGL Photosystem II reaction center protein K OS... 51 5e-06
sp|P10348|PSBK_MARPO Photosystem II reaction center protein K OS... 48 4e-05
sp|Q32RP3|PSBK_ZYGCR Photosystem II reaction center protein K OS... 48 6e-05
sp|Q85BB6|PSBK_ANTFO Photosystem II reaction center protein K OS... 47 9e-05
sp|Q32RW6|PSBK_STAPU Photosystem II reaction center protein K OS... 46 2e-04
sp|P56782|PSBK_ARATH Photosystem II reaction center protein K OS... 45 4e-04
sp|Q06FX8|PSBK_PELHO Photosystem II reaction center protein K OS... 45 5e-04
sp|Q9MTL6|PSBK_OENEH Photosystem II reaction center protein K OS... 45 5e-04
sp|Q49L15|PSBK_EUCGG Photosystem II reaction center protein K OS... 44 6e-04
sp|Q09MJ5|PSBK_CITSI Photosystem II reaction center protein K OS... 44 6e-04
sp|Q85X72|PSBK_PINKO Photosystem II reaction center protein K OS... 44 0.001
sp|Q9MUS0|PSBK_MESVI Photosystem II reaction center protein K OS... 44 0.001
sp|Q0ZJ37|PSBK_VITVI Photosystem II reaction center protein K OS... 43 0.001
sp|P10347|PSBK_SINAL Photosystem II reaction center protein K OS... 43 0.001
sp|Q589B1|PSBK_SILLA Photosystem II reaction center protein K OS... 43 0.001
sp|P41598|PSBK_PINTH Photosystem II reaction center protein K OS... 43 0.001
sp|Q68S23|PSBK_PANGI Photosystem II reaction center protein K OS... 43 0.001
sp|Q5SCX1|PSBK_HUPLU Photosystem II reaction center protein K OS... 43 0.001
sp|Q70Y14|PSBK_AMBTC Photosystem II reaction center protein K OS... 43 0.001
sp|Q8WI34|PSBK_PSINU Photosystem II reaction center protein K OS... 43 0.002
sp|Q06GS7|PSBK_PIPCE Photosystem II reaction center protein K OS... 43 0.002
sp|Q3BAQ9|PSBK_PHAAO Photosystem II reaction center protein K OS... 43 0.002
sp|Q06RE8|PSBK_JASNU Photosystem II reaction center protein K OS... 43 0.002
sp|Q06H14|PSBK_DRIGR Photosystem II reaction center protein K OS... 43 0.002
sp|Q7YJY5|PSBK_CALFG Photosystem II reaction center protein K OS... 43 0.002
sp|Q3ZJ18|PSBK_PSEAK Photosystem II reaction center protein K OS... 42 0.002
sp|Q20EY3|PSBK_OLTVI Photosystem II reaction center protein K OS... 42 0.002
sp|Q56P17|PSBK_LACSA Photosystem II reaction center protein K OS... 42 0.002

>sp|Q85FN7|PSBK_ADICA Photosystem II reaction center protein K
OS=Adiantum capillus-veneris GN=psbK PE=2 SV=1
Length = 58

Score = 79.3 bits (194), Expect = 2e-14
Identities = 42/58 (72%), Positives = 42/58 (72%)
Frame = +2

Query: 323 MTVSYSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
MTVSYSIYLENSLHFGDALLAKLPEAYA LLLAFVWQAAVSFR
Sbjct: 1 MTVSYSIYLENSLHFGDALLAKLPEAYAIFDPIVDVMPVIPVFFLLLAFVWQAAVSFR 58


>sp|Q6YXN4|PSBK_PHYPA Photosystem II reaction center protein K
OS=Physcomitrella patens GN=psbK PE=3 SV=1
Length = 58

Score = 53.9 bits (128), Expect = 8e-07
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +2

Query: 323 MTVSYSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
M ++IYL+N+ H +LAKLPEAYA LLAFVWQA+VSFR
Sbjct: 1 MLAIFNIYLDNAFHLNGIILAKLPEAYAIFDPIVDVMPIIPVFFFLLAFVWQASVSFR 58


>sp|Q8MA00|PSBK_CHAGL Photosystem II reaction center protein K
OS=Chaetosphaeridium globosum GN=psbK PE=3 SV=1
Length = 58

Score = 51.2 bits (121), Expect = 5e-06
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = +2

Query: 338 SIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
S + ++S +F +A LAKLPEAYA LLLAFVWQAAVSFR
Sbjct: 6 STFFDSSSNFSEAFLAKLPEAYAIFDPIVDVMPIIPVFFLLLAFVWQAAVSFR 58


>sp|P10348|PSBK_MARPO Photosystem II reaction center protein K
OS=Marchantia polymorpha GN=psbK PE=3 SV=1
Length = 55

Score = 48.1 bits (113), Expect = 4e-05
Identities = 24/54 (44%), Positives = 30/54 (55%)
Frame = +2

Query: 335 YSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
++IYLEN+ + AKLPEAY+ LLAFVWQA+VSFR
Sbjct: 2 FNIYLENAFYLNGITFAKLPEAYSIFDPIVDVMPIIPLFFFLLAFVWQASVSFR 55


>sp|Q32RP3|PSBK_ZYGCR Photosystem II reaction center protein K
OS=Zygnema circumcarinatum GN=psbK PE=3 SV=2
Length = 58

Score = 47.8 bits (112), Expect = 6e-05
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = +2

Query: 335 YSIYLENSLHFGDA---LLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
+ +YL+N L D+ +LAKLPEAYA LLLAFVWQA+VSFR
Sbjct: 2 FDLYLKNLLDLSDSGTVVLAKLPEAYAIFDPIVDVLPVIPVFFLLLAFVWQASVSFR 58


>sp|Q85BB6|PSBK_ANTFO Photosystem II reaction center protein K
OS=Anthoceros formosae GN=psbK PE=2 SV=1
Length = 55

Score = 47.0 bits (110), Expect = 9e-05
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = +2

Query: 335 YSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
+ I+LEN+ +L KLPEAYA LLAFVWQA+VSFR
Sbjct: 2 FYIHLENTFDLSSTILVKLPEAYAIFDPIVDVMPIIPLFFFLLAFVWQASVSFR 55


>sp|Q32RW6|PSBK_STAPU Photosystem II reaction center protein K
OS=Staurastrum punctulatum GN=psbK PE=3 SV=1
Length = 58

Score = 45.8 bits (107), Expect = 2e-04
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2

Query: 335 YSIYLENSLHF---GDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
++ YL+ L G +LAKLPEAYA LLLAFVWQAAVSFR
Sbjct: 2 FNAYLDTVLDLSANGTVILAKLPEAYAIFDPIVDVMPIIPVFFLLLAFVWQAAVSFR 58


>sp|P56782|PSBK_ARATH Photosystem II reaction center protein K
OS=Arabidopsis thaliana GN=psbK PE=3 SV=1
Length = 61

Score = 45.1 bits (105), Expect = 4e-04
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = +2

Query: 341 IYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
I+ ++L L+AKLPEAYA LLLAFVWQAAVSFR
Sbjct: 10 IFFNSTLFSSTFLVAKLPEAYAFLNPIVDVMPVIPLFFLLLAFVWQAAVSFR 61


>sp|Q06FX8|PSBK_PELHO Photosystem II reaction center protein K
OS=Pelargonium hortorum GN=psbK PE=3 SV=1
Length = 61

Score = 44.7 bits (104), Expect = 5e-04
Identities = 24/52 (46%), Positives = 27/52 (51%)
Frame = +2

Query: 341 IYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
IYL ++L+ KLPEAYA LLAFVWQAAVSFR
Sbjct: 10 IYLHSALYSSSFFFGKLPEAYAFLNPIVDVMPVIPLFFFLLAFVWQAAVSFR 61


>sp|Q9MTL6|PSBK_OENEH Photosystem II reaction center protein K
OS=Oenothera elata subsp. hookeri GN=psbK PE=3 SV=1
Length = 59

Score = 44.7 bits (104), Expect = 5e-04
Identities = 26/52 (50%), Positives = 28/52 (53%)
Frame = +2

Query: 341 IYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
I L + L+ LAKLPEAYA LLLAFVWQAAVSFR
Sbjct: 8 ICLNSDLYSSRFFLAKLPEAYAFLNPIVDVMPVIPLFFLLLAFVWQAAVSFR 59


tr_hit_id A2T313
Definition tr|A2T313|A2T313_ANGEV Photosystem II protein K OS=Angiopteris evecta
Align length 58
Score (bit) 55.5
E-value 3.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950935|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_A17, 5'
(683 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2T313|A2T313_ANGEV Photosystem II protein K OS=Angiopteris e... 55 3e-06
tr|B8LIF4|B8LIF4_9MARC Photosystem II protein K OS=Lobatiriccard... 53 2e-05
tr|B8LIF6|B8LIF6_9MARC Photosystem II protein K OS=Lobatiriccard... 52 5e-05
tr|A9QAZ7|A9QAZ7_9SPER Photosystem II protein K (Fragment) OS=Cy... 52 5e-05
tr|A6H5E8|A6H5E8_CYCTA Photosystem II protein K OS=Cycas taitung... 52 5e-05
tr|Q4FFS7|Q4FFS7_RANMC Photosystem II protein K (Fragment) OS=Ra... 50 1e-04
tr|Q4FFS9|Q4FFS9_GINBI Photosystem II protein K (Fragment) OS=Gi... 49 2e-04
tr|B8LIF2|B8LIF2_9MARC Photosystem II protein K OS=Lobatiriccard... 48 5e-04
tr|B5LMN3|B5LMN3_CICAR Photosystem II protein K OS=Cicer arietin... 47 0.001
tr|A6MM19|A6MM19_BUXMI Photosystem II protein K OS=Buxus microph... 46 0.002
tr|B5SPT9|B5SPT9_9APIA PsbK OS=Ptilimnium nuttallii GN=psbK PE=4... 45 0.004
tr|B5SPT1|B5SPT1_9APIA PsbK OS=Ptilimnium costatum GN=psbK PE=4 ... 45 0.004
tr|B0Z5D6|B0Z5D6_OENPA Photosystem II protein K OS=Oenothera par... 45 0.006
tr|B0Z552|B0Z552_OENGL Photosystem II protein K OS=Oenothera gla... 45 0.006
tr|B0Z4W8|B0Z4W8_OENBI Photosystem II protein K OS=Oenothera bie... 45 0.006
tr|B0Z4N4|B0Z4N4_OENAR Photosystem II protein K OS=Oenothera arg... 45 0.006
tr|A7PKD3|A7PKD3_VITVI Chromosome chr15 scaffold_19, whole genom... 45 0.006
tr|A4QLR6|A4QLR6_NASOF PSII K protein OS=Nasturtium officinale G... 45 0.006
tr|A4QL02|A4QL02_DRANE PSII K protein OS=Draba nemorosa GN=psbK ... 45 0.006
tr|B7T3Z7|B7T3Z7_9ROSI Photosystem II protein K OS=Monsonia vand... 44 0.007
tr|B7T3S6|B7T3S6_9ROSI Photosystem II protein K OS=Monsonia spec... 44 0.007
tr|B8LID6|B8LID6_9MARC Photosystem II protein K OS=Aneura sp. Sh... 44 0.010
tr|A9QC37|A9QC37_TRACE Photosystem II protein K (Fragment) OS=Tr... 44 0.010
tr|A6MMA5|A6MMA5_CHLSC Photosystem II protein K OS=Chloranthus s... 44 0.010
tr|B8R493|B8R493_TRISU Photosystem II protein K OS=Trifolium sub... 44 0.013
tr|B7T468|B7T468_9ROSI Photosystem II protein K OS=Pelargonium c... 44 0.013
tr|B5SPK7|B5SPK7_9APIA PsbK OS=Helosciadium nodiflorum GN=psbK P... 44 0.013
tr|B5SPH9|B5SPH9_9APIA PsbK OS=Cryptotaenia canadensis GN=psbK P... 44 0.013
tr|A8SE51|A8SE51_CERDE Photosystem II protein K OS=Ceratophyllum... 44 0.013
tr|A6YGA7|A6YGA7_LEPTE K protein of photosystem II OS=Leptosira ... 44 0.013

>tr|A2T313|A2T313_ANGEV Photosystem II protein K OS=Angiopteris
evecta GN=psbK PE=4 SV=1
Length = 58

Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/58 (51%), Positives = 33/58 (56%)
Frame = +2

Query: 323 MTVSYSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
M V ++IYLEN+ D LAKLPEAYA LLAFVWQAAVSFR
Sbjct: 1 MLVLFNIYLENNSQLTDTFLAKLPEAYAIFDPIVDVMPVIPLFFFLLAFVWQAAVSFR 58


>tr|B8LIF4|B8LIF4_9MARC Photosystem II protein K OS=Lobatiriccardia
lobata GN=psbK PE=4 SV=1
Length = 55

Score = 52.8 bits (125), Expect = 2e-05
Identities = 27/54 (50%), Positives = 32/54 (59%)
Frame = +2

Query: 335 YSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
++I+L+N H G L AKLPEAYA LLLAFVWQA+VSFR
Sbjct: 2 FNIFLDNGFHQGGFLFAKLPEAYAIFDPIVDVMPIIPLFFLLLAFVWQASVSFR 55


>tr|B8LIF6|B8LIF6_9MARC Photosystem II protein K OS=Lobatiriccardia
lobata GN=psbK PE=4 SV=1
Length = 55

Score = 51.6 bits (122), Expect = 5e-05
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = +2

Query: 335 YSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
++I+LEN H L KLPEAYA LLLAFVWQA+VSFR
Sbjct: 2 FNIFLENGFHLNGLFLTKLPEAYAIFDPIVDIMPIIPLFFLLLAFVWQASVSFR 55


>tr|A9QAZ7|A9QAZ7_9SPER Photosystem II protein K (Fragment) OS=Cycas
micronesica GN=psbK PE=4 SV=1
Length = 58

Score = 51.6 bits (122), Expect = 5e-05
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +2

Query: 323 MTVSYSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
M +I L+++LH D LAKLPEAYA LLAFVWQAAVSFR
Sbjct: 1 MPAMSNICLDDALHLNDLFLAKLPEAYAIFDPVVDVMPIIPVFFFLLAFVWQAAVSFR 58


>tr|A6H5E8|A6H5E8_CYCTA Photosystem II protein K OS=Cycas
taitungensis GN=psbK PE=4 SV=1
Length = 58

Score = 51.6 bits (122), Expect = 5e-05
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +2

Query: 323 MTVSYSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
M +I L+++LH D LAKLPEAYA LLAFVWQAAVSFR
Sbjct: 1 MPAMSNICLDDALHLNDLFLAKLPEAYAIFDPVVNVMPIIPVLFFLLAFVWQAAVSFR 58


>tr|Q4FFS7|Q4FFS7_RANMC Photosystem II protein K (Fragment)
OS=Ranunculus macranthus GN=psbK PE=4 SV=1
Length = 61

Score = 50.1 bits (118), Expect = 1e-04
Identities = 28/52 (53%), Positives = 29/52 (55%)
Frame = +2

Query: 341 IYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
IYL + LH L AKLPEAYA LLLAFVWQAAVSFR
Sbjct: 10 IYLNSILHSSHFLFAKLPEAYAFFNPIVDIMPVIPLFFLLLAFVWQAAVSFR 61


>tr|Q4FFS9|Q4FFS9_GINBI Photosystem II protein K (Fragment)
OS=Ginkgo biloba GN=psbK PE=4 SV=1
Length = 55

Score = 49.3 bits (116), Expect = 2e-04
Identities = 26/53 (49%), Positives = 30/53 (56%)
Frame = +2

Query: 338 SIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
+I L+N + D LAKLPEAYA LLLAFVWQAA+SFR
Sbjct: 3 NICLDNVFYLSDPFLAKLPEAYAISDPIVDVMPIIPVFFLLLAFVWQAAISFR 55


>tr|B8LIF2|B8LIF2_9MARC Photosystem II protein K OS=Lobatiriccardia
lobata GN=psbK PE=4 SV=1
Length = 55

Score = 48.1 bits (113), Expect = 5e-04
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = +2

Query: 335 YSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
++IYL+N H + KLPEAYA LLLAFVWQA+VSFR
Sbjct: 2 FNIYLDNGFHRDCFIFIKLPEAYAIFDPIVDVMPIIPLFFLLLAFVWQASVSFR 55


>tr|B5LMN3|B5LMN3_CICAR Photosystem II protein K OS=Cicer arietinum
GN=psbK PE=4 SV=1
Length = 61

Score = 46.6 bits (109), Expect = 0.001
Identities = 26/55 (47%), Positives = 31/55 (56%)
Frame = +2

Query: 332 SYSIYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
S I ++++L+ LLAKLPEAYA LLAFVWQAAVSFR
Sbjct: 7 SVCICIDSALYSSSFLLAKLPEAYAFLNPIVDFMPVIPLLFFLLAFVWQAAVSFR 61


>tr|A6MM19|A6MM19_BUXMI Photosystem II protein K OS=Buxus
microphylla GN=psbK PE=4 SV=1
Length = 61

Score = 46.2 bits (108), Expect = 0.002
Identities = 25/52 (48%), Positives = 27/52 (51%)
Frame = +2

Query: 341 IYLENSLHFGDALLAKLPEAYAXXXXXXXXXXXXXXXXLLLAFVWQAAVSFR 496
IYL +SLH +KLPEAYA LLA VWQAAVSFR
Sbjct: 10 IYLNSSLHSSSFFFSKLPEAYAFLNPIVDVMPVIPVLFFLLALVWQAAVSFR 61