DK950944 |
Clone id |
TST38A01NGRL0010_B02 |
Library |
TST38 |
Length |
671 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_B02. 5' end sequence. |
Accession |
DK950944 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL233Contig1 |
Sequence |
CTGCGTGGGCGGAGCTTCGAGCAACTGAACGAAGGGCTTTGCTTAAGCGGAATTTCCCTC TTAGGGCTACCGGTCAAAAGCTTCAGGCAGCTCAGACGCTCCTTGAGAAGGAGATGCTGC AGATTCTGTTGTAGGTGTGTTCTCTTCACTCCGGTGAAGTGAAGACCGGTGATATGTACA AAGATAGGGGTGATGGGCGTGGTGGAAGCCGTGAATCTATCGATGCTAAGAAGCGCATTG AGGAGACTCTAGAGAGGACATCTCCTTCGACATCCAAGGGAAATGCAAGGGAAAAAGATC GTGTTTCTATGGTGCCTGCATCAACTGGTAGACGCCTAGGCTCTGTTGACTTAAGGCCTA CATTTGACAAGACCAAGTATGCAGACGATGGCGAAGAATCAGAGACTGACAGCGAAGAAT CGGATGTTAGTGGATCAGATGGTGACGACACTTCTTGGGTTTCTTGGTTTTGCGGTTTGA GAGGGAATGAGTTCTTTTGTGAGGTGGACGACGAGTACATTCAGGATGATTTCAATTTAA GTGGACTAAGCAGCCAGGTCCCTTATTATGAGTATGCACTGGATTTGATTCTGGATGCAG AGTCTCCGAATGTTGACATGTTAACTGATGAGCAGAATGAGATGGTGGAATCGGCTGCAG AAATGCTGTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P40228 |
Definition |
sp|P40228|CSK2B_ARATH Casein kinase II subunit beta OS=Arabidopsis thaliana |
Align length |
163 |
Score (bit) |
124.0 |
E-value |
4.0e-28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T768 |
Definition |
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
156 |
Score (bit) |
166.0 |
E-value |
2.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950944|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_B02, 5' (671 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella paten... 166 2e-39 tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella paten... 149 2e-34 tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea... 139 2e-31 tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella paten... 135 2e-30 tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genom... 134 7e-30 tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Popul... 131 4e-29 tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2... 129 1e-28 tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 129 2e-28 tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS... 127 6e-28 tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative... 127 6e-28 tr|Q0KKA4|Q0KKA4_HORVU Casein kinase II beta OS=Hordeum vulgare ... 127 6e-28 tr|B8BIA2|B8BIA2_ORYSI Putative uncharacterized protein OS=Oryza... 127 6e-28 tr|A9S7H2|A9S7H2_PHYPA Predicted protein OS=Physcomitrella paten... 127 8e-28 tr|Q7XC26|Q7XC26_ORYSJ Casein kinase II beta-4 subunit, putative... 126 1e-27 tr|Q336R6|Q336R6_ORYSJ Os10g0564900 protein OS=Oryza sativa subs... 126 1e-27 tr|Q2V308|Q2V308_ARATH Uncharacterized protein At5g47080.3 OS=Ar... 125 2e-27 tr|Q8LPD2|Q8LPD2_TOBAC Protein kinase Ck2 regulatory subunit 2 O... 125 3e-27 tr|Q3E8F5|Q3E8F5_ARATH Uncharacterized protein At5g47080.2 OS=Ar... 124 5e-27 tr|Q9FQF7|Q9FQF7_MAIZE Protein kinase CK2 regulatory subunit CK2... 122 2e-26 tr|B6SQ06|B6SQ06_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 122 2e-26 tr|B4FN07|B4FN07_MAIZE Putative uncharacterized protein OS=Zea m... 122 2e-26 tr|A5BGR6|A5BGR6_VITVI Putative uncharacterized protein OS=Vitis... 121 3e-26 tr|Q9FQF6|Q9FQF6_MAIZE Protein kinase CK2 regulatory subunit CK2... 120 6e-26 tr|Q84VF5|Q84VF5_ORYSJ Possible protein kinase CK2 regulatory su... 120 6e-26 tr|Q84RS4|Q84RS4_ORYSJ Os07g0495100 protein OS=Oryza sativa subs... 120 6e-26 tr|B8B6D0|B8B6D0_ORYSI Putative uncharacterized protein OS=Oryza... 120 6e-26 tr|B6TNU8|B6TNU8_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 120 6e-26 tr|B6TIH0|B6TIH0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 120 6e-26 tr|B6TGH2|B6TGH2_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 120 6e-26 tr|B4G0Y3|B4G0Y3_MAIZE Putative uncharacterized protein OS=Zea m... 120 6e-26
>tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_59578 PE=4 SV=1 Length = 298
Score = 166 bits (419), Expect = 2e-39 Identities = 88/156 (56%), Positives = 105/156 (67%), Gaps = 2/156 (1%) Frame = +3
Query: 210 RESIDAKKRIEETLERTSPSTSKGN-AREKDRVSMVPAST-GRRLGSVDLRPTFDKTKYA 383 R+ D KKR+E+ ++++SPSTS+G REKDR++ A+T RR + RPT +K KY Sbjct: 26 RDVTDNKKRLEDGIDKSSPSTSRGGIGREKDRIAAPAATTQSRRNAGHETRPTMEKAKYP 85
Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 563 FC LRGNEFFCEVDDEYIQDDFNLSGLSSQVP Sbjct: 86 EDAEDSESESEDSDVSASDGEDTSWISWFCSLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 145
Query: 564 YYEYALDLILDAESPNVDMLTDEQNEMVESAAEMLY 671 YY+YALDLILD ESP+ DMLT+EQNE+VESAAEMLY Sbjct: 146 YYDYALDLILDVESPSDDMLTEEQNELVESAAEMLY 181
>tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219176 PE=4 SV=1 Length = 299
Score = 149 bits (376), Expect = 2e-34 Identities = 87/159 (54%), Positives = 100/159 (62%), Gaps = 5/159 (3%) Frame = +3
Query: 210 RESIDAKKRIEETLERTSP-STSKGN-AREKDRVSMVPASTGR-RLGSVDLRPTFDKTKY 380 R+ D KKR E + P STSKG REKDR++ + T R +++ RPT +K KY Sbjct: 24 RDVTDNKKRFEGGIPLLQPPSTSKGLIGREKDRIAAAASKTQTSRNAALEARPTLEKAKY 83
Query: 381 AXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FCGLRGNEFFCEVDDEYIQDDFNLSGLSS 554 FCGLRGNEFFCEVDDEYIQDDFNLSGLSS Sbjct: 84 PEDVAAEDSESESEDSDVSASDGEDTSWISWFCGLRGNEFFCEVDDEYIQDDFNLSGLSS 143
Query: 555 QVPYYEYALDLILDAESPNVDMLTDEQNEMVESAAEMLY 671 QVPYY+YALDLILD ESP+ DMLT+EQNE+VESAAEMLY Sbjct: 144 QVPYYDYALDLILDVESPSDDMLTEEQNELVESAAEMLY 182
>tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 297
Score = 139 bits (350), Expect = 2e-31 Identities = 82/155 (52%), Positives = 92/155 (59%), Gaps = 7/155 (4%) Frame = +3
Query: 228 KKRIEETL------ERTSPSTSKGNAREKDRVSMVPASTGRRL-GSVDLRPTFDKTKYAX 386 +KRI + L E++ PSTSKG R+S+ S GRR G DKT YA Sbjct: 29 RKRINDALDKHLHLEKSPPSTSKGL---NGRLSIPSTSAGRRAPGDSRNASALDKTNYAE 85
Query: 387 XXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPY 566 FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPY Sbjct: 86 DVEDSDTDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPY 145
Query: 567 YEYALDLILDAESPNVDMLTDEQNEMVESAAEMLY 671 Y+YALDLILD ES N D+LT+EQNE+VESAAEMLY Sbjct: 146 YDYALDLILDVESSNDDILTEEQNELVESAAEMLY 180
>tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_116155 PE=4 SV=1 Length = 249
Score = 135 bits (341), Expect = 2e-30 Identities = 76/148 (51%), Positives = 98/148 (66%), Gaps = 1/148 (0%) Frame = +3
Query: 231 KRIEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 407 KR+++ +E++S STSKG +EKDR++ A+T + L + DL +++ + Sbjct: 2 KRLDDGIEKSSASTSKGWIGKEKDRLAPAAAAT-QILVAEDLESESEESDVSGSDGEDTA 60
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 587 FCGLRGNEFFCE+DDEYIQDDFNLSGL SQVPYY+YALDL Sbjct: 61 WISW----------------FCGLRGNEFFCEIDDEYIQDDFNLSGLRSQVPYYDYALDL 104
Query: 588 ILDAESPNVDMLTDEQNEMVESAAEMLY 671 ILD E P+ D+LT+EQNE+VESAAEMLY Sbjct: 105 ILDVEPPSDDILTEEQNELVESAAEMLY 132
>tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019032001 PE=4 SV=1 Length = 288
Score = 134 bits (336), Expect = 7e-30 Identities = 76/148 (51%), Positives = 95/148 (64%), Gaps = 3/148 (2%) Frame = +3
Query: 237 IEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKT--KYAXXXXXXXX 407 +++ LE++SPSTSKG ++++K+R+S+ S G+ +D R T + K Sbjct: 28 LDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGK--SQLDHRDTRAASLPKNKCSDEESET 85
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 587 FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPYY+YALDL Sbjct: 86 DSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDL 145
Query: 588 ILDAESPNVDMLTDEQNEMVESAAEMLY 671 ILD ES + DM T+EQNE+VESAAEMLY Sbjct: 146 ILDVESSHGDMFTEEQNELVESAAEMLY 173
>tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 330
Score = 131 bits (329), Expect = 4e-29 Identities = 76/157 (48%), Positives = 95/157 (60%), Gaps = 12/157 (7%) Frame = +3
Query: 237 IEETLERTSPSTSKG---NAREKDRVSMVPASTGRRLGS---------VDLRPTFDKTKY 380 +++ LE++SPSTS+G ++++K+R+S+ STG+ L D R +K Sbjct: 31 LDKHLEKSSPSTSRGLNNSSKDKERLSVPSTSTGKSLQHHQQQLDHHRADSRSA-SLSKN 89
Query: 381 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQV 560 FC LRGNEFFCEVDDEYIQDDFNL GLSSQV Sbjct: 90 KCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQV 149
Query: 561 PYYEYALDLILDAESPNVDMLTDEQNEMVESAAEMLY 671 PYY+YALDLILD ES + DM T+EQNE+VESAAEMLY Sbjct: 150 PYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLY 186
>tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2B1 (Putative uncharacterized protein) OS=Zea mays PE=2 SV=1 Length = 276
Score = 129 bits (325), Expect = 1e-28 Identities = 74/150 (49%), Positives = 90/150 (60%), Gaps = 2/150 (1%) Frame = +3
Query: 228 KKRIEETLERTSPSTSKG--NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXX 401 +KRI E ++R+SPSTS G REK+R+ + R G + K A Sbjct: 16 RKRIGEPMDRSSPSTSWGFSGGREKERIGVGKQPEMPRSGGGSTAMSKSKLSDAESETDS 75
Query: 402 XXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYAL 581 FC L+GNEFFCEVDD+YIQDDFNL GLS+QVPYY+YAL Sbjct: 76 EESDVSGSDGEDTSWISW----FCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYAL 131
Query: 582 DLILDAESPNVDMLTDEQNEMVESAAEMLY 671 DLILD ES + DMLT+EQNE++ESAAEMLY Sbjct: 132 DLILDVESSHGDMLTEEQNELIESAAEMLY 161
>tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea mays PE=2 SV=1 Length = 275
Score = 129 bits (323), Expect = 2e-28 Identities = 74/150 (49%), Positives = 91/150 (60%), Gaps = 2/150 (1%) Frame = +3
Query: 228 KKRIEETLERTSPSTSKG--NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXX 401 +KRI E ++R+SPSTS G REK+R+ + R G K+K + Sbjct: 16 RKRIGEPMDRSSPSTSWGFSGGREKERIGVGKQPEMPRSGGGST--AMSKSKLSDESETD 73
Query: 402 XXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYAL 581 FC L+GNEFFCEVDD+YIQDDFNL GLS+QVPYY+YAL Sbjct: 74 SEESDVSGSDGEDTSWISW---FCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYAL 130
Query: 582 DLILDAESPNVDMLTDEQNEMVESAAEMLY 671 DLILD ES + DMLT+EQNE++ESAAEMLY Sbjct: 131 DLILDVESSHGDMLTEEQNELIESAAEMLY 160
>tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS=Oryza sativa GN=OSJNBa0027P10.8 PE=4 SV=1 Length = 280
Score = 127 bits (319), Expect = 6e-28 Identities = 71/148 (47%), Positives = 91/148 (61%) Frame = +3
Query: 228 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 407 K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K + Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 587 FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+YALDL Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 588 ILDAESPNVDMLTDEQNEMVESAAEMLY 671 ILD ES N D+ T+EQNE++ES+AEMLY Sbjct: 137 ILDIESSNGDVFTEEQNELIESSAEMLY 164
>tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g41520 PE=4 SV=2 Length = 280
Score = 127 bits (319), Expect = 6e-28 Identities = 71/148 (47%), Positives = 91/148 (61%) Frame = +3
Query: 228 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 407 K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K + Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 587 FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+YALDL Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 588 ILDAESPNVDMLTDEQNEMVESAAEMLY 671 ILD ES N D+ T+EQNE++ES+AEMLY Sbjct: 137 ILDIESSNGDVFTEEQNELIESSAEMLY 164
|