DK950963 [AcEST]

DK950963
Clone id	TST38A01NGRL0010_B21
Library	TST38
Length	673
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_B21. 5' end sequence.
Accession	DK950963
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL453Contig1
Sequence	CGCAGGTTTCGTTTCTCTGTGCGTTTGTTCCGAAATGAGTCCTCCAGGTGTCCTTCTAGC GTCTCCGGCAGCACAGGCCGGGGCTCAACACTTATGCAGATTGGCGCAGAACCCTCAAGC ATTTTCCATAGCTGGTAGAGCCCACCTTAAGGCTCTCTTCATGCCCGCAGCGTTATCGCC TTTAACGAGCAAAGGGTTCCACGTCTCTGCTGCCTATAGCTCCAATAGATACAACAACAA TTACAACGACTACTACGATGACATAGTCGTGGATATGGACCCGGAAAAGATGCTCAAACC AGGTGATCCCAACACTTTCCAAGCAACCATCCGCAAGGCAATGCCTGTGGGTTACTGGGT TACTATGTCAAGTGGCCGCGAGGCGTTCCTACCTGCCCAGGATCTAAAAAATCTTGGTGG CCTTGAAAAGCTCAGGTCTATCTTCCAGCCCGGACAAGAAGTGACTGTGCGAGTAGTCAC CCGCGGTGGCTCTGGTAGAGAGGTCCTTTCTTTGAAGAAACCTGACCCCAACAAACCTGA CCCCCCACCCAAGCCCCTCANGAAAGAGTTTGAAGGTGGCCGTCGGCGCCGCCCCTCCNA CTATTGATAATTTCTAAAGGTTAGAAATCAGTCCCCTGTCATGCTTCCCTGCCTAATGAT GAAGCTTTCATGT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q5RBP8
Definition	sp\|Q5RBP8\|PROP_PONAB Properdin OS=Pongo abelii
Align length	56
Score (bit)	31.2
E-value	5.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950963\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_B21, 5' (673 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q5RBP8\|PROP_PONAB Properdin OS=Pongo abelii GN=CFP PE=2 SV=1 31 5.2 >sp\|Q5RBP8\|PROP_PONAB Properdin OS=Pongo abelii GN=CFP PE=2 SV=1 Length = 469 Score = 31.2 bits (69), Expect = 5.2 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = +1 Query: 262 HSRGYGPGKDAQTR*SQHFPSNHPQGNACGLLGYYVKWPRGVPTCP--GSKKSWWP 423 HS + P + + S PS P G C L Y + G+P CP GS W P Sbjct: 210 HSGTHEPKETRSRKCSAPEPSQKPPGKPCPGLAYEQRRCTGLPPCPVAGSWGPWGP 265
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A4VEE8
Definition	tr\|A4VEE8\|A4VEE8_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length	40
Score (bit)	34.3
E-value	7.3
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950963\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_B21, 5' (673 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A4VEE8\|A4VEE8_TETTH Putative uncharacterized protein OS=Tetra... 34 7.3 >tr\|A4VEE8\|A4VEE8_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00123689 PE=4 SV=1 Length = 239 Score = 34.3 bits (77), Expect = 7.3 Identities = 20/40 (50%), Positives = 24/40 (60%) Frame = +3 Query: 528 PTNLTPHPSPSXKSLKVAVGAAPPTIDNF*RLEISPLSCF 647 PT+ TP PSP S+ VA APP F R+ +SPLS F Sbjct: 92 PTSQTPFPSPYNASV-VASKVAPPIFLIFLRVSLSPLSIF 130