DK950982
Clone id TST38A01NGRL0010_C17
Library
Length 691
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_C17. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GCAGATTCTCAGCTATGGTCTAAGGGATGTAAAACTCATCATTGTTTACAAAAAGCTAGG
CCGCGGAAGATGGATGTATACACAGCAGGTAGCATATCTGACAGGCTGATTACTTATGCA
AATGCAAATAAGAGGCAGGCAATTGCGAGTGGAGGGTTCCAGGATGTAACAGAACACGTT
GACGATCTGCATATAGCCTCATATGAAATTGATCCAGATTTTGTCTTTGGTAGAAACGAG
AGGAATCTGGAGGAGCCTGGCCTTACCAAGGAGCCTTGCGCACATGAAGAAACATCCCTT
ACAGGAGCGCGGACTAGAAGAGAGCTTCTGACAGGAACTCTGCTGTCCGGCTTAGCAATG
ACAGTTTCCTTTCAAACAAGAAAAACGCTTGCGGCAGTAGCACCAGTGCCAGCTGGAATG
AAGGAGGCCTCCCCTGATGGAGTCAGTGCTCCCGCATCGGTAGAAAAACCTAGCGGCTCG
AGAATTTATGATGCTTCCGTTCTTGGTGAACCATTTGCTGTAGGTAAAGACAAAGGACGC
GTCTGGCAAAAAGTACTGGCAGCCCGTGTTGTCTATCTTGGAGAGTCTGAGAGAGTTCCA
GATCCTGATGATAAGGTTCTTGAGTTAGAGATAGTCAAAACAATCAGGGACAAATGTTTT
GAGCAGAAGCGCCCTGTGTCACTGGCACTCG
■■Homology search results ■■ -
sp_hit_id Q03610
Definition sp|Q03610|YN81_CAEEL Uncharacterized protein ZC84.1 OS=Caenorhabditis elegans
Align length 44
Score (bit) 26.9
E-value 0.96
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950982|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_C17, 5'
(691 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q03610|YN81_CAEEL Uncharacterized protein ZC84.1 OS=Caenorhab... 27 0.96
sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens G... 33 1.4
sp|Q8CHI8|EP400_MOUSE E1A-binding protein p400 OS=Mus musculus G... 32 4.2
sp|Q123F4|TRPC_POLSJ Indole-3-glycerol phosphate synthase OS=Pol... 31 7.2
sp|O75690|KRA58_HUMAN Keratin-associated protein 5-8 OS=Homo sap... 31 7.2
sp|P22137|CLH_YEAST Clathrin heavy chain OS=Saccharomyces cerevi... 31 7.2
sp|Q6AX33|MAST3_XENLA Microtubule-associated serine/threonine-pr... 30 9.3
sp|P93831|CLF_ARATH Histone-lysine N-methyltransferase CLF OS=Ar... 30 9.4

>sp|Q03610|YN81_CAEEL Uncharacterized protein ZC84.1 OS=Caenorhabditis
elegans GN=ZC84.1 PE=4 SV=5
Length = 1556

Score = 26.9 bits (58), Expect(2) = 0.96
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3

Query: 284 CAQGSLVRPGSSRFLSFLPKTKSGSISYEAICRSSTCSVTSWNP 153
C +G + + G P K ++S ++I TCS WNP
Sbjct: 1260 CKKGFIEKAGKC----MTPVEKKSAVSSKSINNGVTCSKPGWNP 1299



Score = 25.0 bits (53), Expect(2) = 0.96
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Frame = -2

Query: 459 RCGSTDSIRGGLLHSS---WHWCY----CRKRFSCLKGNCHC*AG 346
+C S + GL H+ C C++ C++G+C C G
Sbjct: 1219 QCSSNQVLHNGLCHNKAKLGEACLTVRQCQENSGCIEGSCECKKG 1263


>sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens
GN=EP400 PE=1 SV=3
Length = 3160

Score = 33.1 bits (74), Expect = 1.4
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +1

Query: 361 TVSFQTRKTLAAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKGR 540
T Q + + AP PA + A P VS PA+V G +V G A+G+ +
Sbjct: 2893 TSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKA 2952

Query: 541 VWQKVLAARV 570
Q V+A V
Sbjct: 2953 AGQTVVAQPV 2962


>sp|Q8CHI8|EP400_MOUSE E1A-binding protein p400 OS=Mus musculus
GN=Ep400 PE=1 SV=2
Length = 3072

Score = 31.6 bits (70), Expect = 4.2
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = +1

Query: 361 TVSFQTRKTLAAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKGR 540
T Q + + P PA + A P VS PA+V G +V G A+G+ +
Sbjct: 2804 TSQLQAQGQMQTQTPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKT 2863

Query: 541 VWQKVLAARV 570
Q V+A V
Sbjct: 2864 AGQTVVAQPV 2873


>sp|Q123F4|TRPC_POLSJ Indole-3-glycerol phosphate synthase
OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=trpC
PE=3 SV=1
Length = 264

Score = 30.8 bits (68), Expect = 7.2
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1

Query: 385 TLAAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKG 537
TL+ + VPA + G+S PA V++ +R+ +A ++GE F +D G
Sbjct: 205 TLSLLGKVPADRLLVTESGISTPADVKRLREARV-NAFLVGEAFMRAEDPG 254


>sp|O75690|KRA58_HUMAN Keratin-associated protein 5-8 OS=Homo
sapiens GN=KRTAP5-8 PE=2 SV=2
Length = 187

Score = 30.8 bits (68), Expect = 7.2
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = -2

Query: 456 CGSTDSIRGGLLHSSWHWCYCRKRFSCLKGNCHC*AGQQSSCQKLSSSPRSCKGC 292
CGS +GG C C K C G C Q S C+ S CK C
Sbjct: 70 CGSCGGSKGGCGSCGCSQCSCYKPCCCSSG-CGSSCCQSSCCKPCCSQSSCCKPC 123


>sp|P22137|CLH_YEAST Clathrin heavy chain OS=Saccharomyces cerevisiae
GN=CHC1 PE=1 SV=1
Length = 1653

Score = 30.8 bits (68), Expect = 7.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1

Query: 556 LAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQK 669
LA+ +VYLG+ + D K +++ K + D C E+K
Sbjct: 1233 LASTLVYLGDYQAAVDTARKASNIKVWKLVNDACIEKK 1270


>sp|Q6AX33|MAST3_XENLA Microtubule-associated serine/threonine-protein
kinase 3 OS=Xenopus laevis GN=mast3 PE=2 SV=1
Length = 1482

Score = 30.4 bits (67), Expect = 9.3
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = -3

Query: 344 SRVPVRSSLLVRAPVRDVSSCAQGSLVRPGSSRFLSFLPKTKSGSISYEAICRSSTCSVT 165
SRVP +S+ + + GSL P S R LS P ++ S S R S+ +V+
Sbjct: 911 SRVPKSASVSALSLIITSDDFGSGSLASPISPRSLSSNPSSRDSSPS-----RESSVAVS 965

Query: 164 SWNPP 150
S PP
Sbjct: 966 SLRPP 970


>sp|P93831|CLF_ARATH Histone-lysine N-methyltransferase CLF
OS=Arabidopsis thaliana GN=CLF PE=1 SV=2
Length = 902

Score = 30.4 bits (67), Expect = 9.4
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 19/112 (16%)
Frame = -2

Query: 519 SKWFTKNGSIINS---RAARFFYRCGSTDSIRGGLLHSSWHWCYCRKRFSCLKG------ 367
S F NG+++N+ R +RF R G ++ +++H RKR + K
Sbjct: 595 SSKFDINGNMVNNQVRRRSRFLRRRGKVRRLKYTWKSAAYH--SIRKRITEKKDQPCRQF 652

Query: 366 ---NCHC*AGQQ-------SSCQKLSSSPRSCKGCFFMCARLLGKARLLQIP 241
NC G++ + C+K P+SCK F C + R Q P
Sbjct: 653 NPCNCKIACGKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCP 704


tr_hit_id A9SSB4
Definition tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 72
Score (bit) 116.0
E-value 2.0e-24
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950982|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_C17, 5'
(691 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment) OS=Physcomit... 116 2e-24
tr|A9RY09|A9RY09_PHYPA Predicted protein (Fragment) OS=Physcomit... 114 6e-24
tr|Q9SIY5|Q9SIY5_ARATH Chloroplast lumen common protein family (... 107 5e-22
tr|Q0WVB8|Q0WVB8_ARATH Putative uncharacterized protein At2g4040... 107 5e-22
tr|Q9LYM7|Q9LYM7_ARATH Putative uncharacterized protein F18O21_1... 103 1e-20
tr|Q8RWG3|Q8RWG3_ARATH Putative uncharacterized protein At3g5614... 103 1e-20
tr|A5BZ40|A5BZ40_VITVI Putative uncharacterized protein OS=Vitis... 103 1e-20
tr|A3B515|A3B515_ORYSJ Putative uncharacterized protein OS=Oryza... 102 3e-20
tr|A7Q3Q9|A7Q3Q9_VITVI Chromosome chr13 scaffold_48, whole genom... 100 9e-20
tr|Q941X4|Q941X4_ORYSJ cDNA clone:001-201-E07, full insert seque... 100 1e-19
tr|B8ABM2|B8ABM2_ORYSI Putative uncharacterized protein OS=Oryza... 100 1e-19
tr|A2ZZ58|A2ZZ58_ORYSJ Putative uncharacterized protein OS=Oryza... 100 1e-19
tr|B6SLM6|B6SLM6_MAIZE Putative uncharacterized protein OS=Zea m... 90 2e-16
tr|A4LTT0|A4LTT0_BURPS Putative uncharacterized protein OS=Burkh... 36 2.0
tr|B6P254|B6P254_BRAFL Putative uncharacterized protein (Fragmen... 35 4.5
tr|Q6C5E7|Q6C5E7_YARLI YALI0E18700p OS=Yarrowia lipolytica GN=YA... 35 4.5
tr|Q0EXG4|Q0EXG4_9PROT Mechanosensitive ion channel family prote... 35 4.5
tr|B1J9X1|B1J9X1_PSEPW Putative uncharacterized protein OS=Pseud... 35 5.9
tr|Q7RNI8|Q7RNI8_PLAYO Porphobilinogen deaminase, putative OS=Pl... 35 5.9
tr|Q4UFM9|Q4UFM9_THEAN Putative uncharacterized protein OS=Theil... 35 5.9
tr|Q1YDW4|Q1YDW4_MOBAS Possible regulatory protein, MarR family ... 34 7.7
tr|B1YAL3|B1YAL3_THENV Carbamoyl-phosphate synthase, large subun... 34 7.7
tr|A1RTS0|A1RTS0_PYRIL Carbamoyl-phosphate synthase large subuni... 34 7.7
tr|A4HF65|A4HF65_LEIBR Putative uncharacterized protein OS=Leish... 34 10.0

>tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_11257 PE=4 SV=1
Length = 582

Score = 116 bits (290), Expect = 2e-24
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = +1

Query: 475 GSRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELEIVKTIRDK 654
GSR+YDA+VLGEP AVG ++ RVWQK+L ARVVYLGE+ERVPDPDDK+LEL IV+ +RD
Sbjct: 2 GSRVYDATVLGEPVAVGGERNRVWQKLLQARVVYLGEAERVPDPDDKILELGIVRKLRDA 61

Query: 655 CFEQKRPVSLAL 690
CFEQ RP+SLAL
Sbjct: 62 CFEQARPMSLAL 73


>tr|A9RY09|A9RY09_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_20837 PE=4 SV=1
Length = 576

Score = 114 bits (285), Expect = 6e-24
Identities = 53/71 (74%), Positives = 63/71 (88%)
Frame = +1

Query: 478 SRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELEIVKTIRDKC 657
SR+YDA+VLGEP AVG ++ RVWQK+L ARVVYLGE+ERVPDPDDK+LE+ IV+ +RD C
Sbjct: 1 SRVYDATVLGEPVAVGGERSRVWQKLLQARVVYLGEAERVPDPDDKILEMGIVRKLRDAC 60

Query: 658 FEQKRPVSLAL 690
FEQ RPVSLAL
Sbjct: 61 FEQARPVSLAL 71


>tr|Q9SIY5|Q9SIY5_ARATH Chloroplast lumen common protein family
(At2g40400/T3G21.17) OS=Arabidopsis thaliana
GN=At2g40400 PE=2 SV=1
Length = 735

Score = 107 bits (268), Expect = 5e-22
Identities = 53/80 (66%), Positives = 63/80 (78%)
Frame = +1

Query: 451 PASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELE 630
P E+ SRIYDASVLGEP AVGKDK RVW+K+L AR+VYLGE+E+VP DDKVLELE
Sbjct: 113 PVEKEEAITSRIYDASVLGEPMAVGKDKKRVWEKLLNARIVYLGEAEQVPTRDDKVLELE 172

Query: 631 IVKTIRDKCFEQKRPVSLAL 690
IV+ +R +C E R +SLAL
Sbjct: 173 IVRNLRKRCIESDRQLSLAL 192


>tr|Q0WVB8|Q0WVB8_ARATH Putative uncharacterized protein At2g40400
OS=Arabidopsis thaliana GN=At2g40400 PE=2 SV=1
Length = 735

Score = 107 bits (268), Expect = 5e-22
Identities = 53/80 (66%), Positives = 63/80 (78%)
Frame = +1

Query: 451 PASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELE 630
P E+ SRIYDASVLGEP AVGKDK RVW+K+L AR+VYLGE+E+VP DDKVLELE
Sbjct: 113 PVEKEEAITSRIYDASVLGEPMAVGKDKKRVWEKLLNARIVYLGEAEQVPTRDDKVLELE 172

Query: 631 IVKTIRDKCFEQKRPVSLAL 690
IV+ +R +C E R +SLAL
Sbjct: 173 IVRNLRKRCIESDRQLSLAL 192


>tr|Q9LYM7|Q9LYM7_ARATH Putative uncharacterized protein F18O21_100
OS=Arabidopsis thaliana GN=F18O21_100 PE=4 SV=1
Length = 755

Score = 103 bits (257), Expect = 1e-20
Identities = 53/100 (53%), Positives = 70/100 (70%)
Frame = +1

Query: 391 AAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARV 570
AA P PA + P P + E+ SRIYDA+ +GEP A+GKDK +VW+K+L ARV
Sbjct: 106 AAPPPPPATTTPSPPP----PVNKEETITSRIYDATAIGEPMAMGKDKKKVWEKLLNARV 161

Query: 571 VYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLAL 690
VYLGE+E+VP DDK LELEIV+ +R +C E +R +S+AL
Sbjct: 162 VYLGEAEQVPTKDDKELELEIVRNLRKRCVESERQISVAL 201


>tr|Q8RWG3|Q8RWG3_ARATH Putative uncharacterized protein At3g56140
(At3g56140) OS=Arabidopsis thaliana GN=At3g56140 PE=2
SV=1
Length = 745

Score = 103 bits (257), Expect = 1e-20
Identities = 53/100 (53%), Positives = 70/100 (70%)
Frame = +1

Query: 391 AAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARV 570
AA P PA + P P + E+ SRIYDA+ +GEP A+GKDK +VW+K+L ARV
Sbjct: 106 AAPPPPPATTTPSPPP----PVNKEETITSRIYDATAIGEPMAMGKDKKKVWEKLLNARV 161

Query: 571 VYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLAL 690
VYLGE+E+VP DDK LELEIV+ +R +C E +R +S+AL
Sbjct: 162 VYLGEAEQVPTKDDKELELEIVRNLRKRCVESERQISVAL 201


>tr|A5BZ40|A5BZ40_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_028159 PE=4 SV=1
Length = 749

Score = 103 bits (256), Expect = 1e-20
Identities = 55/106 (51%), Positives = 73/106 (68%), Gaps = 6/106 (5%)
Frame = +1

Query: 391 AAVAPVPAGMKEASPDGVSA--PASVEKPSG----SRIYDASVLGEPFAVGKDKGRVWQK 552
+ VA G + P S PA+ EK SRIYDA+V+GEP A+GKDK +VW+K
Sbjct: 101 SVVARAEEGTEAVMPAAASGTVPAAAEKKMEEAIVSRIYDATVIGEPMALGKDKRKVWEK 160

Query: 553 VLAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLAL 690
++ AR+VYLGE+E+VP DD+ LELEIVK +R +C E +RP+SLAL
Sbjct: 161 LMNARIVYLGEAEQVPIRDDRELELEIVKKLRKRCAENERPLSLAL 206


>tr|A3B515|A3B515_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_018137 PE=4 SV=1
Length = 1263

Score = 102 bits (253), Expect = 3e-20
Identities = 57/115 (49%), Positives = 79/115 (68%), Gaps = 15/115 (13%)
Frame = +1

Query: 391 AAVAPVPAGMK--EASPDGVSAPA------------SVEKPSGSRIYDASVLGEPFAVGK 528
A + P+P+ EA P S+P+ V++ + SR+YDA+V+GEP AVGK
Sbjct: 581 AILRPLPSSAADGEAPPTDSSSPSPPSAEEAGAVVEEVDESALSRVYDATVIGEPEAVGK 640

Query: 529 D-KGRVWQKVLAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLAL 690
D +GRVW+K+ AARVVYLGE+E VPDPDD+VLELEI+K + +C E +R V++AL
Sbjct: 641 DARGRVWEKLTAARVVYLGEAELVPDPDDRVLELEIMKGLATRCAEAERGVAVAL 695


>tr|A7Q3Q9|A7Q3Q9_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029379001
PE=4 SV=1
Length = 620

Score = 100 bits (249), Expect = 9e-20
Identities = 47/77 (61%), Positives = 64/77 (83%)
Frame = +1

Query: 460 VEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELEIVK 639
+E+ SRIYDA+V+GEP A+GKDK +VW+K++ AR+VYLGE+E+VP DD+ LELEIVK
Sbjct: 1 MEEAIVSRIYDATVIGEPMALGKDKRKVWEKLMNARIVYLGEAEQVPIRDDRELELEIVK 60

Query: 640 TIRDKCFEQKRPVSLAL 690
+R +C E +RP+SLAL
Sbjct: 61 KLRKRCAENERPLSLAL 77


>tr|Q941X4|Q941X4_ORYSJ cDNA clone:001-201-E07, full insert sequence
OS=Oryza sativa subsp. japonica GN=B1088C09.2 PE=2 SV=1
Length = 723

Score = 99.8 bits (247), Expect = 1e-19
Identities = 58/107 (54%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
Frame = +1

Query: 382 KTLAAVAPVPAGMKEASPDGVSAPASVEKPSG---SRIYDASVLGEPFAVGKD-KGRVWQ 549
K A+ AP PA A+P AP S +P SR+YDA+V+GEP AVGKD + RVW+
Sbjct: 76 KQAASPAPGPA----AAP----APTSAGEPEAEALSRVYDATVIGEPQAVGKDARRRVWE 127

Query: 550 KVLAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLAL 690
K++AARVVYLGE+E VPD DD+VLELE+V+ + +C E R +SLAL
Sbjct: 128 KLMAARVVYLGEAELVPDRDDRVLELEVVRKLAARCAEAGRSISLAL 174