DK950984 |
Clone id |
TST38A01NGRL0010_C19 |
Library |
TST38 |
Length |
633 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_C19. 5' end sequence. |
Accession |
DK950984 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3208Contig1 |
Sequence |
AGAAAGCAGTGATCCTCACGTTGCCCCACGGCCCGAGCATTTTGGAGGTGGAGTCGCTGA TCCAACAAGCTTGGGGGGTAGATTTCACATATCTTTCTGTTCCTCTTGTTCTTACAAGAA AACAGCTTTGGAAATGCGAACGGCACTCATGAACAGTTTTCCTGGAACGGCTGTGGCTTT GAGCAATTATCCGCCACCTCTTCCCAAGCGTTTGCTCATCAAGGTGATCCCCGTTGTTCA AGTGGCTGGTATTGCATTCGTGGCTGCTGGAGACCATATATTTCCACTACTGGGATATGC CTCCCCACCTTCTTGGTACAACCCTGTGCGAGGAAACCGATTCGGGGCAGCAGCAGGCCT TTGGGTCTTAGGCAACGTTCTGCAGAACACACTTCAAGGCACGGGAGCATTTGAAGTTTA TTTTGACGGCGATTTGATCTTTTCTAAGCTTAAACAGGGGAGGTTCCCAGAAGAGTTCGA GCTGAGGGAGCTTGCTGCAAAGACACAGGAGCTGAAGGGAAGACTGTAATAGTTCAGCAA TAGAGCAGGCATCGTAATAGTTATGTAATTTTGTGCTTTTGAAAATATTCGCGTCGGAAA TATTGAAAATCTGACTTTGTTCAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9STZ2 |
Definition |
sp|Q9STZ2|SELT_ARATH SelT-like protein OS=Arabidopsis thaliana |
Align length |
144 |
Score (bit) |
171.0 |
E-value |
3.0e-42 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NLA1 |
Definition |
tr|A9NLA1|A9NLA1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
154 |
Score (bit) |
189.0 |
E-value |
8.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950984|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_C19, 5' (609 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NLA1|A9NLA1_PICSI Putative uncharacterized protein OS=Picea... 189 8e-47 tr|B8AZ22|B8AZ22_ORYSI Putative uncharacterized protein OS=Oryza... 179 1e-43 tr|Q8W1E5|Q8W1E5_ARATH AT5g58640/mzn1_90 (Putative uncharacteriz... 177 4e-43 tr|A7QHQ1|A7QHQ1_VITVI Chromosome chr8 scaffold_99, whole genome... 176 7e-43 tr|A5BN73|A5BN73_VITVI Putative uncharacterized protein OS=Vitis... 176 7e-43 tr|Q6I5I7|Q6I5I7_ORYSJ Os05g0467300 protein OS=Oryza sativa subs... 174 5e-42 tr|B4F7T6|B4F7T6_MAIZE Putative uncharacterized protein OS=Zea m... 171 2e-41 tr|A9PGA5|A9PGA5_POPTR Putative uncharacterized protein OS=Popul... 160 4e-38 tr|Q8S227|Q8S227_ORYSJ cDNA clone:006-302-G02, full insert seque... 156 8e-37 tr|A2ZZ94|A2ZZ94_ORYSJ Putative uncharacterized protein OS=Oryza... 156 8e-37 tr|A2WWN4|A2WWN4_ORYSI Putative uncharacterized protein OS=Oryza... 156 8e-37 tr|A9P9D4|A9P9D4_POPTR Putative uncharacterized protein OS=Popul... 156 1e-36 tr|B6U144|B6U144_MAIZE SelT-like protein OS=Zea mays PE=2 SV=1 155 2e-36 tr|A3B4X0|A3B4X0_ORYSJ Putative uncharacterized protein OS=Oryza... 147 4e-34 tr|Q9LUZ3|Q9LUZ3_ARATH Similarity to unknown protein OS=Arabidop... 120 6e-26 tr|A8HNT1|A8HNT1_CHLRE Selenoprotein T OS=Chlamydomonas reinhard... 118 3e-25 tr|A8PSK3|A8PSK3_BRUMA SelT/selW/selH selenoprotein domain conta... 79 2e-13 tr|B3MP82|B3MP82_DROAN GF15710 OS=Drosophila ananassae GN=GF1571... 74 7e-12 tr|B4KGC7|B4KGC7_DROMO GI16976 OS=Drosophila mojavensis GN=GI169... 74 9e-12 tr|B4LTV0|B4LTV0_DROVI GJ17222 OS=Drosophila virilis GN=GJ17222 ... 72 2e-11 tr|B4N107|B4N107_DROWI GK24855 OS=Drosophila willistoni GN=GK248... 72 3e-11 tr|A8XQS9|A8XQS9_CAEBR Putative uncharacterized protein OS=Caeno... 72 3e-11 tr|A7SZM5|A7SZM5_NEMVE Predicted protein (Fragment) OS=Nematoste... 72 3e-11 tr|B4P3U8|B4P3U8_DROYA GE11298 OS=Drosophila yakuba GN=GE11298 P... 70 7e-11 tr|B8BVA3|B8BVA3_THAPS Predicted protein OS=Thalassiosira pseudo... 70 1e-10 tr|B4I1B1|B4I1B1_DROSE GM18515 OS=Drosophila sechellia GN=GM1851... 70 1e-10 tr|B3N4E2|B3N4E2_DROER GG25041 OS=Drosophila erecta GN=GG25041 P... 70 1e-10 tr|Q29L10|Q29L10_DROPS GA17753 OS=Drosophila pseudoobscura pseud... 69 2e-10 tr|Q170C1|Q170C1_AEDAE Putative uncharacterized protein OS=Aedes... 69 2e-10 tr|B4GSI3|B4GSI3_DROPE GL26542 OS=Drosophila persimilis GN=GL265... 69 2e-10
>tr|A9NLA1|A9NLA1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 227
Score = 189 bits (481), Expect = 8e-47 Identities = 87/154 (56%), Positives = 109/154 (70%) Frame = +2
Query: 44 GGGVADPTSLGGRFHISFCSSCSYKKTALEMRTALMNSFPGTAVALSNYPPPLPKRLLIK 223 G G G HISFC+SCSY+ TAL M+ L ++FPG V LSNYPPPLPKR+L K Sbjct: 69 GAGAGAGAGAGAVVHISFCTSCSYRGTALTMKKMLESAFPGVDVVLSNYPPPLPKRMLSK 128
Query: 224 VIPVVQVAGIAFVAAGDHIFPLLGYASPPSWYNPVRGNRFGAAAGLWVLGNVLQNTLQGT 403 +PV+Q+ I + AGDHIFP LGY +PP WY ++ RFG A W+LGN LQ+ LQGT Sbjct: 129 FVPVLQIGSIVLITAGDHIFPRLGYTAPPPWYYSLKQKRFGVIATTWLLGNALQSFLQGT 188
Query: 404 GAFEVYFDGDLIFSKLKQGRFPEEFELRELAAKT 505 GAFEV +GDL+FSKL++ RFP E+ELREL ++ Sbjct: 189 GAFEVECNGDLVFSKLRENRFPGEYELRELVGRS 222
>tr|B8AZ22|B8AZ22_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20274 PE=4 SV=1 Length = 216
Score = 179 bits (454), Expect = 1e-43 Identities = 86/160 (53%), Positives = 105/160 (65%) Frame = +2
Query: 14 PHVAPRPEHFGGGVADPTSLGGRFHISFCSSCSYKKTALEMRTALMNSFPGTAVALSNYP 193 PH P P H D G + FC+SCSYK TA+ M+ L SFPG V L NYP Sbjct: 39 PHHHPHPPHHHPANVDGAGYGTTVELQFCASCSYKGTAMTMKRMLETSFPGIHVILHNYP 98
Query: 194 PPLPKRLLIKVIPVVQVAGIAFVAAGDHIFPLLGYASPPSWYNPVRGNRFGAAAGLWVLG 373 PP PKR+L K++P++QV IA + AGDHIFP LG PP WY +R NRFG A +W+ G Sbjct: 99 PPFPKRVLGKLVPILQVGAIATIMAGDHIFPRLGMV-PPPWYYSLRANRFGTMATIWLFG 157
Query: 374 NVLQNTLQGTGAFEVYFDGDLIFSKLKQGRFPEEFELREL 493 N Q+ LQ +GAFEVY +GDL+FSKL + RFP EFELR+L Sbjct: 158 NFAQSFLQSSGAFEVYCNGDLVFSKLAEQRFPSEFELRDL 197
>tr|Q8W1E5|Q8W1E5_ARATH AT5g58640/mzn1_90 (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At5g58640 PE=2 SV=1 Length = 228
Score = 177 bits (449), Expect = 4e-43 Identities = 82/164 (50%), Positives = 110/164 (67%) Frame = +2
Query: 14 PHVAPRPEHFGGGVADPTSLGGRFHISFCSSCSYKKTALEMRTALMNSFPGTAVALSNYP 193 P P G+ G I+FC SCSYK TA+ M+ L +FPG V L+NYP Sbjct: 53 PETLDFPSQKTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYP 112
Query: 194 PPLPKRLLIKVIPVVQVAGIAFVAAGDHIFPLLGYASPPSWYNPVRGNRFGAAAGLWVLG 373 PP PKRLL KV+PVVQ+ I + AGD I P++G +PP+W++ +R NRFG+ A W++G Sbjct: 113 PPAPKRLLAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIG 172
Query: 374 NVLQNTLQGTGAFEVYFDGDLIFSKLKQGRFPEEFELRELAAKT 505 N LQ+ LQ +GAFEV+ +G+ +FSKLK+GRFP E ELR+L +KT Sbjct: 173 NFLQSYLQSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKT 216
>tr|A7QHQ1|A7QHQ1_VITVI Chromosome chr8 scaffold_99, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038878001 PE=4 SV=1 Length = 227
Score = 176 bits (447), Expect = 7e-43 Identities = 86/171 (50%), Positives = 112/171 (65%), Gaps = 9/171 (5%) Frame = +2
Query: 17 HVAPRPEHFGGGVADPTS---------LGGRFHISFCSSCSYKKTALEMRTALMNSFPGT 169 H P+P+ + PT G +I+FCSSCSY+ A+ M+ L + FPG Sbjct: 37 HQQPQPKPQSAPLDFPTQKESGIGGIGFGNTVNINFCSSCSYRGNAVTMKNMLESQFPGV 96
Query: 170 AVALSNYPPPLPKRLLIKVIPVVQVAGIAFVAAGDHIFPLLGYASPPSWYNPVRGNRFGA 349 V L+NYPPPLPKRLL KV+PVVQ+ I V AG+ IFP LG+ +PP WY +R NRFG Sbjct: 97 TVVLANYPPPLPKRLLSKVVPVVQIGVIGIVMAGEQIFPRLGFIAPPPWYYSLRANRFGT 156
Query: 350 AAGLWVLGNVLQNTLQGTGAFEVYFDGDLIFSKLKQGRFPEEFELRELAAK 502 + W+LGN LQ+ LQ +GAFEVY +G+L+FSKLKQ RFP E EL++L + Sbjct: 157 ISTTWLLGNFLQSFLQSSGAFEVYCNGELVFSKLKQQRFPGEIELKDLVGQ 207
>tr|A5BN73|A5BN73_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024323 PE=4 SV=1 Length = 232
Score = 176 bits (447), Expect = 7e-43 Identities = 86/171 (50%), Positives = 112/171 (65%), Gaps = 9/171 (5%) Frame = +2
Query: 17 HVAPRPEHFGGGVADPTS---------LGGRFHISFCSSCSYKKTALEMRTALMNSFPGT 169 H P+P+ + PT G +I+FCSSCSY+ A+ M+ L + FPG Sbjct: 42 HQQPQPKPQSAPLDFPTQKESGIGGIGFGNTVNINFCSSCSYRGNAVTMKNMLESQFPGV 101
Query: 170 AVALSNYPPPLPKRLLIKVIPVVQVAGIAFVAAGDHIFPLLGYASPPSWYNPVRGNRFGA 349 V L+NYPPPLPKRLL KV+PVVQ+ I V AG+ IFP LG+ +PP WY +R NRFG Sbjct: 102 TVVLANYPPPLPKRLLSKVVPVVQIGVIGIVMAGEQIFPRLGFIAPPPWYYSLRANRFGT 161
Query: 350 AAGLWVLGNVLQNTLQGTGAFEVYFDGDLIFSKLKQGRFPEEFELRELAAK 502 + W+LGN LQ+ LQ +GAFEVY +G+L+FSKLKQ RFP E EL++L + Sbjct: 162 ISTTWLLGNFLQSFLQSSGAFEVYCNGELVFSKLKQQRFPGEIELKDLVGQ 212
>tr|Q6I5I7|Q6I5I7_ORYSJ Os05g0467300 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0009E21.18 PE=2 SV=1 Length = 257
Score = 174 bits (440), Expect = 5e-42 Identities = 86/160 (53%), Positives = 105/160 (65%) Frame = +2
Query: 14 PHVAPRPEHFGGGVADPTSLGGRFHISFCSSCSYKKTALEMRTALMNSFPGTAVALSNYP 193 PH P E V D G + FC+SCSYK TA+ M+ L SFPG V L NYP Sbjct: 81 PHPDPAAEAIQANV-DGAGYGTTVELQFCASCSYKGTAMTMKRMLETSFPGIHVILHNYP 139
Query: 194 PPLPKRLLIKVIPVVQVAGIAFVAAGDHIFPLLGYASPPSWYNPVRGNRFGAAAGLWVLG 373 PP PKR+L K++P++QV IA + AGDHIFP LG PP WY +R NRFG A +W+ G Sbjct: 140 PPFPKRVLGKLVPILQVGAIATIMAGDHIFPRLGMV-PPPWYYSLRANRFGTMATIWLFG 198
Query: 374 NVLQNTLQGTGAFEVYFDGDLIFSKLKQGRFPEEFELREL 493 N Q+ LQ +GAFEVY +GDL+FSKL + RFP EFELR+L Sbjct: 199 NFAQSFLQSSGAFEVYCNGDLVFSKLAEQRFPSEFELRDL 238
>tr|B4F7T6|B4F7T6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 249
Score = 171 bits (434), Expect = 2e-41 Identities = 81/145 (55%), Positives = 100/145 (68%) Frame = +2
Query: 59 DPTSLGGRFHISFCSSCSYKKTALEMRTALMNSFPGTAVALSNYPPPLPKRLLIKVIPVV 238 D G + FC+SCSYK TA+ M+ L SFPG V L NYPPP PKR+L KVIP+V Sbjct: 87 DEAGFGSTVELQFCASCSYKGTAVTMKRMLETSFPGIHVILHNYPPPFPKRVLSKVIPIV 146
Query: 239 QVAGIAFVAAGDHIFPLLGYASPPSWYNPVRGNRFGAAAGLWVLGNVLQNTLQGTGAFEV 418 QV +A + AGD IFP +G +PP WY +R NRFG A +W+ GN Q+ LQ +GAFEV Sbjct: 147 QVGAVATIMAGDQIFPRIGMVAPP-WYYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEV 205
Query: 419 YFDGDLIFSKLKQGRFPEEFELREL 493 Y +GDL+FSKL + RFP EFELR+L Sbjct: 206 YCNGDLVFSKLAEQRFPSEFELRDL 230
>tr|A9PGA5|A9PGA5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 223
Score = 160 bits (406), Expect = 4e-38 Identities = 76/152 (50%), Positives = 104/152 (68%) Frame = +2
Query: 47 GGVADPTSLGGRFHISFCSSCSYKKTALEMRTALMNSFPGTAVALSNYPPPLPKRLLIKV 226 GG+ + G +I+FC SCSY+ TA+ M+ L + FPG V L+N+P LPKRLL KV Sbjct: 68 GGLGN-IGFGNVININFCVSCSYRGTAVTMKNMLESEFPGIQVILANHPASLPKRLLSKV 126
Query: 227 IPVVQVAGIAFVAAGDHIFPLLGYASPPSWYNPVRGNRFGAAAGLWVLGNVLQNTLQGTG 406 +P VQ I + AG+ IFP LG+A+PP WY +R NRFG+ A W+ GN +Q+ LQ +G Sbjct: 127 VPAVQFGIIGIILAGEQIFPRLGFAAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSG 186
Query: 407 AFEVYFDGDLIFSKLKQGRFPEEFELRELAAK 502 AFEV+ +G+L+FSKL + RFP E ELR++ K Sbjct: 187 AFEVFCNGELVFSKLMEHRFPGEIELRDVVGK 218
>tr|Q8S227|Q8S227_ORYSJ cDNA clone:006-302-G02, full insert sequence OS=Oryza sativa subsp. japonica GN=P0446G04.43-2 PE=2 SV=1 Length = 232
Score = 156 bits (395), Expect = 8e-37 Identities = 75/145 (51%), Positives = 94/145 (64%) Frame = +2
Query: 59 DPTSLGGRFHISFCSSCSYKKTALEMRTALMNSFPGTAVALSNYPPPLPKRLLIKVIPVV 238 D + G + FC+SCSY+ A+ ++ L SFPG V L NYPPP PKR L K +P + Sbjct: 70 DGPASGTTVELKFCASCSYRGNAVTVKKMLETSFPGIHVVLENYPPPFPKRALSKAVPFL 129
Query: 239 QVAGIAFVAAGDHIFPLLGYASPPSWYNPVRGNRFGAAAGLWVLGNVLQNTLQGTGAFEV 418 QV +A + AGD IFP G PP WY +R NRFG A +W+ GN Q+ LQ +GAFEV Sbjct: 130 QVGAMATLMAGDQIFPRFGMV-PPPWYYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEV 188
Query: 419 YFDGDLIFSKLKQGRFPEEFELREL 493 Y +G L+FSKL + RFP EFELREL Sbjct: 189 YCNGQLVFSKLSEQRFPSEFELREL 213
>tr|A2ZZ94|A2ZZ94_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_003866 PE=4 SV=1 Length = 245
Score = 156 bits (395), Expect = 8e-37 Identities = 75/145 (51%), Positives = 94/145 (64%) Frame = +2
Query: 59 DPTSLGGRFHISFCSSCSYKKTALEMRTALMNSFPGTAVALSNYPPPLPKRLLIKVIPVV 238 D + G + FC+SCSY+ A+ ++ L SFPG V L NYPPP PKR L K +P + Sbjct: 70 DGPASGTTVELKFCASCSYRGNAVTVKKMLETSFPGIHVVLENYPPPFPKRALSKAVPFL 129
Query: 239 QVAGIAFVAAGDHIFPLLGYASPPSWYNPVRGNRFGAAAGLWVLGNVLQNTLQGTGAFEV 418 QV +A + AGD IFP G PP WY +R NRFG A +W+ GN Q+ LQ +GAFEV Sbjct: 130 QVGAMATLMAGDQIFPRFGMV-PPPWYYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEV 188
Query: 419 YFDGDLIFSKLKQGRFPEEFELREL 493 Y +G L+FSKL + RFP EFELREL Sbjct: 189 YCNGQLVFSKLSEQRFPSEFELREL 213
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