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NBDC - LSDB Archive
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DK950986
Clone id TST38A01NGRL0010_C21
Library
Length 591
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_C21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
CAAAAGTTGGAGGAAACCAGGGTCAAAAGGGCCTCCGAAGCAAAAGAAATCAAAGATGCA
GAGAAAAAACAGCAATTGTCAGTGAAGGACCAAAAAGTCCGGAAAAGGCAATCTAGGAAG
GAGCGCATAGAGAAAAAGGATCCCAACAAGCCGAAGAGGGCTCCAACTGCCTTTTTCATT
TACCTTGAGGACTTCAGGAAGATTTACAAGGAAGAACATCCGGATGTGAAGGGTGTGGCA
GCGGTTGGTAAAGCTTGCGGTGACAAATGGAAGGAGATGTCTGATGAGGAAAAAGCACCT
TACATTGAAAAGGCGGCTCATAAGAGAGCAAAGTATGAAAAGGCACTCGCAATCATATCA
CCAGAAACAGAGCACTGGTATTTTTTCTGCCGCCCCAGGGGATCAAGATCAAGATGAACA
AGATAATGATGAAGAGGGAAGTGAATAGGATGATGATGATGAATACGAAGAGTAGGCTTT
GCAGTGTAAATGATAACCTCCTATACAGGGTAACAAGCTAACTTATTGCAAGTGTGGTCA
CACACTCGGTCTAACAATTATTGGCGCTAATTCAGGGTTACTTATGATCTA
■■Homology search results ■■ -
sp_hit_id P40620
Definition sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba
Align length 118
Score (bit) 109.0
E-value 1.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950986|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_C21, 5'
         (591 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1      109   1e-23
sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1     108   3e-23
sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1     107   4e-23
sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=M...   105   2e-22
sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE...    99   2e-20
sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taur...    76   1e-13
sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus musc...    75   2e-13
sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo sap...    75   3e-13
sp|P52925|HMGB2_RAT High mobility group protein B2 OS=Rattus nor...    74   4e-13
sp|P17741|HMGB2_PIG High mobility group protein B2 OS=Sus scrofa...    74   4e-13
sp|P26583|HMGB2_HUMAN High mobility group protein B2 OS=Homo sap...    74   4e-13
sp|P40673|HMGB2_BOVIN High mobility group protein B2 OS=Bos taur...    74   4e-13
sp|P40618|HMGB3_CHICK High mobility group protein B3 OS=Gallus g...    74   7e-13
sp|P30681|HMGB2_MOUSE High mobility group protein B2 OS=Mus musc...    72   2e-12
sp|P36194|HMGB1_CHICK High mobility group protein B1 OS=Gallus g...    72   2e-12
sp|P0C6E5|HG3BL_HUMAN Putative high mobility group protein B3-li...    72   3e-12
sp|Q05344|SSRP1_DROME FACT complex subunit Ssrp1 OS=Drosophila m...    70   6e-12
sp|Q05153|SSRP1_ARATH FACT complex subunit SSRP1 OS=Arabidopsis ...    70   8e-12
sp|Q6CC79|NHP6_YARLI Non-histone chromosomal protein 6 OS=Yarrow...    70   8e-12
sp|Q5KEP6|NHP6_CRYNE Non-histone chromosomal protein 6 OS=Crypto...    70   8e-12
sp|O01683|SSP1B_CAEEL FACT complex subunit ssrp1-B OS=Caenorhabd...    70   1e-11
sp|P63159|HMGB1_RAT High mobility group protein B1 OS=Rattus nor...    69   1e-11
sp|A9RA84|HMGB1_PAPAN High mobility group protein B1 OS=Papio an...    69   1e-11
sp|P63158|HMGB1_MOUSE High mobility group protein B1 OS=Mus musc...    69   1e-11
sp|Q4R844|HMGB1_MACFA High mobility group protein B1 OS=Macaca f...    69   1e-11
sp|P09429|HMGB1_HUMAN High mobility group protein B1 OS=Homo sap...    69   1e-11
sp|Q08IE6|HMGB1_HORSE High mobility group protein B1 OS=Equus ca...    69   1e-11
sp|P07156|HMGB1_CRIGR High mobility group protein B1 (Fragment) ...    69   1e-11
sp|Q6YKA4|HMGB1_CANFA High mobility group protein B1 OS=Canis fa...    69   1e-11
sp|B1MTB0|HMGB1_CALMO High mobility group protein B1 OS=Calliceb...    69   1e-11

>sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1
          Length = 149

 Score =  109 bits (272), Expect = 1e-23
 Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
 Frame = +1

Query: 22  VKRASEAKEIKDAEKKQQLSVKDQKVRKRQSRKER-IEKKDPNKPKRAPTAFFIYLEDFR 198
           +K      E K AE K  ++ K     K   +  +  E KDPNKPKR P+AFF+++ DFR
Sbjct: 1   MKGGKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFR 60

Query: 199 KIYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALAIISPETE 372
           + YK++HP+ K VAAVGKACG++WK +S+EEKAPY+++A  K+ +YE  L   + + E
Sbjct: 61  EQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKKLE 118


>sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1
          Length = 144

 Score =  108 bits (269), Expect = 3e-23
 Identities = 51/97 (52%), Positives = 71/97 (73%)
 Frame = +1

Query: 58  AEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFRKIYKEEHPDVKGV 237
           A+   +L+VK Q    ++++K     KDPNKPKR P+AFF+++EDFRK YKE+HP+ K V
Sbjct: 8   AKSDNKLAVKKQAADTKKTKKA---VKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSV 64

Query: 238 AAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKAL 348
           A VGKA GDKWK+++  EKAP+I KA  ++ +YEK L
Sbjct: 65  AVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNL 101


>sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1
          Length = 152

 Score =  107 bits (267), Expect = 4e-23
 Identities = 49/107 (45%), Positives = 71/107 (66%)
 Frame = +1

Query: 22  VKRASEAKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFRK 201
           +K      E K A+ K  ++ K    + R+   +    KDPNKPKR P+AFF+++E+FRK
Sbjct: 1   MKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRK 60

Query: 202 IYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEK 342
           ++ +EHP+ K V+AVGKA G KWK MSD EKAPY+ K+  ++ +YEK
Sbjct: 61  VFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEK 107


>sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays
           GN=MNB1B PE=1 SV=1
          Length = 157

 Score =  105 bits (262), Expect = 2e-22
 Identities = 50/104 (48%), Positives = 72/104 (69%)
 Frame = +1

Query: 40  AKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFRKIYKEEH 219
           AK    A+   +L+VK +   K    ++    KDPNKPKRAP+AFF+++E+FRK +KE++
Sbjct: 4   AKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKN 63

Query: 220 PDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALA 351
           P  K VAAVGKA GD+WK +S+ +KAPY+ KA   + +Y KA+A
Sbjct: 64  PKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIA 107


>sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE=2
           SV=1
          Length = 161

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 48/105 (45%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = +1

Query: 40  AKEIKDAEKKQQLSVKDQKVRKRQSR-KERIEKKDPNKPKRAPTAFFIYLEDFRKIYKEE 216
           AK    A+   +L+VK +   K  ++ K+    KDPNKPKRAP+AFF+++ +FR+ +K++
Sbjct: 4   AKSKGAAKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQK 63

Query: 217 HPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALA 351
           +P  K VAAVGKA G++WK +S+ EKAPY+ KA   + +Y KA+A
Sbjct: 64  NPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIA 108


>sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taurus
           GN=HMGB3 PE=2 SV=2
          Length = 200

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 41/109 (37%), Positives = 61/109 (55%)
 Frame = +1

Query: 25  KRASEAKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFRKI 204
           K  S+  E+  A+K +     D++++     K   +KKDPN PKR P+ FF++  +FR  
Sbjct: 55  KEKSKFDEMAKADKVRY----DREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPK 110

Query: 205 YKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALA 351
            K  +P +  +  V K  G+ W  +SD EK PYI KAA  + KYEK +A
Sbjct: 111 IKSANPGIS-IGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVA 158



 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +1

Query: 133 KKDPNKPKRAPTAFFIYLEDFRKIYKEEHPDVK-GVAAVGKACGDKWKEMSDEEKAPYIE 309
           K DP KPK   +A+  +++  R+ +K+++P+V    A   K C ++WK MS +EK+ + E
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62

Query: 310 KAAHKRAKYEKALAIISP 363
            A   + +Y++ +    P
Sbjct: 63  MAKADKVRYDREMKDYGP 80


>sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus
           musculus GN=Hmgb3 PE=2 SV=3
          Length = 200

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 40/109 (36%), Positives = 61/109 (55%)
 Frame = +1

Query: 25  KRASEAKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFRKI 204
           K  S+  E+  A+K +     D++++     K   +KKDPN PKR P+ FF++  +FR  
Sbjct: 55  KEKSKFDEMAKADKVRY----DREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPK 110

Query: 205 YKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALA 351
            K  +P +  +  V K  G+ W  +SD EK PY+ KAA  + KYEK +A
Sbjct: 111 IKSTNPGIS-IGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVA 158



 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +1

Query: 133 KKDPNKPKRAPTAFFIYLEDFRKIYKEEHPDVK-GVAAVGKACGDKWKEMSDEEKAPYIE 309
           K DP KPK   +A+  +++  R+ +K+++P+V    A   K C ++WK MS +EK+ + E
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDE 62

Query: 310 KAAHKRAKYEKALAIISP 363
            A   + +Y++ +    P
Sbjct: 63  MAKADKVRYDREMKDYGP 80


>sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo
           sapiens GN=HMGB3 PE=1 SV=4
          Length = 200

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 40/109 (36%), Positives = 61/109 (55%)
 Frame = +1

Query: 25  KRASEAKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFRKI 204
           K  S+  E+  A+K +     D++++     K   +KKDPN PKR P+ FF++  +FR  
Sbjct: 55  KEKSKFDEMAKADKVRY----DREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPK 110

Query: 205 YKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALA 351
            K  +P +  +  V K  G+ W  ++D EK PYI KAA  + KYEK +A
Sbjct: 111 IKSTNPGIS-IGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVA 158



 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +1

Query: 133 KKDPNKPKRAPTAFFIYLEDFRKIYKEEHPDVK-GVAAVGKACGDKWKEMSDEEKAPYIE 309
           K DP KPK   +A+  +++  R+ +K+++P+V    A   K C ++WK MS +EK+ + E
Sbjct: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62

Query: 310 KAAHKRAKYEKALAIISP 363
            A   + +Y++ +    P
Sbjct: 63  MAKADKVRYDREMKDYGP 80


>sp|P52925|HMGB2_RAT High mobility group protein B2 OS=Rattus
           norvegicus GN=Hmgb2 PE=2 SV=2
          Length = 210

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
 Frame = +1

Query: 25  KRASEAKEIKDAEKKQQLS--VKDQKVRKRQSRKERI--------EKKDPNKPKRAPTAF 174
           K+ SE  +   A++K +     K  K R  +  K  +        +KKDPN PKR P+AF
Sbjct: 43  KKCSERWKTMSAKEKSKFEDLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAF 102

Query: 175 FIYLEDFRKIYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALA 351
           F++  + R   K EHP +  +    K  G+ W E S ++K PY +KAA  + KYEK +A
Sbjct: 103 FLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIA 160



 Score = 53.9 bits (128), Expect = 6e-07
 Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +1

Query: 133 KKDPNKPKRAPTAFFIYLEDFRKIYKEEHPDVK-GVAAVGKACGDKWKEMSDEEKAPYIE 309
           K DPNKP+   +++  +++  R+ +K++HPD     A   K C ++WK MS +EK+ + +
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 310 KAAHKRAKYEKAL 348
            A   +A+Y++ +
Sbjct: 63  LAKSDKARYDREM 75


>sp|P17741|HMGB2_PIG High mobility group protein B2 OS=Sus scrofa
           GN=HMGB2 PE=1 SV=2
          Length = 210

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
 Frame = +1

Query: 25  KRASEAKEIKDAEKKQQLS--VKDQKVRKRQSRKERI--------EKKDPNKPKRAPTAF 174
           K+ SE  +   A++K +     K  K R  +  K  +        +KKDPN PKR P+AF
Sbjct: 43  KKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAF 102

Query: 175 FIYLEDFRKIYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALA 351
           F++  + R   K EHP +  +    K  G+ W E S ++K PY +KAA  + KYEK +A
Sbjct: 103 FLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIA 160



 Score = 54.3 bits (129), Expect = 5e-07
 Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +1

Query: 133 KKDPNKPKRAPTAFFIYLEDFRKIYKEEHPDVK-GVAAVGKACGDKWKEMSDEEKAPYIE 309
           K DPNKP+   +++  +++  R+ +K++HPD     A   K C ++WK MS +EK+ + +
Sbjct: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62

Query: 310 KAAHKRAKYEKAL 348
            A   +A+Y++ +
Sbjct: 63  MAKSDKARYDREM 75
tr_hit_id A9NN63
Definition tr|A9NN63|A9NN63_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 123
Score (bit) 135.0
E-value 1.0e-30
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950986|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_C21, 5'
         (591 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NN63|A9NN63_PICSI Putative uncharacterized protein OS=Picea...   135   1e-30
tr|A5BN89|A5BN89_VITVI Putative uncharacterized protein OS=Vitis...   125   2e-27
tr|Q3EAL6|Q3EAL6_ARATH Uncharacterized protein At3g51880.2 OS=Ar...   125   2e-27
tr|O49595|O49595_ARATH HMG protein (At3g51880/ORF13) (Putative u...   125   2e-27
tr|A5BH86|A5BH86_VITVI Putative uncharacterized protein OS=Vitis...   120   8e-26
tr|A9PD85|A9PD85_POPTR Putative uncharacterized protein OS=Popul...   117   4e-25
tr|A9NK65|A9NK65_PICSI Putative uncharacterized protein OS=Picea...   117   5e-25
tr|A9NTD7|A9NTD7_PICSI Putative uncharacterized protein OS=Picea...   114   4e-24
tr|Q1EMR5|Q1EMR5_PLAMJ HMG-protein (Fragment) OS=Plantago major ...   114   5e-24
tr|A9NY59|A9NY59_PICSI Putative uncharacterized protein OS=Picea...   114   5e-24
tr|Q40094|Q40094_IPONI High mobility group protein 2 HMG2 OS=Ipo...   112   1e-23
tr|O49948|O49948_SOLTU High mobility group protein OS=Solanum tu...   112   2e-23
tr|A5BH75|A5BH75_VITVI Putative uncharacterized protein OS=Vitis...   112   2e-23
tr|A9SKQ6|A9SKQ6_PHYPA Predicted protein OS=Physcomitrella paten...   111   3e-23
tr|A7QWN3|A7QWN3_VITVI Chromosome chr4 scaffold_205, whole genom...   110   6e-23
tr|A9Q9K9|A9Q9K9_PHYPA High mobility group protein B2 OS=Physcom...   108   2e-22
tr|Q4ZH67|Q4ZH67_CUCSA High mobility group protein OS=Cucumis sa...   108   2e-22
tr|Q9LM85|Q9LM85_ARATH F2D10.18 OS=Arabidopsis thaliana PE=4 SV=1     107   4e-22
tr|P93047|P93047_ARATH HMG1 protein (HMG protein) (Expressed pro...   107   4e-22
tr|A8MQS4|A8MQS4_ARATH Uncharacterized protein At1g20696.3 OS=Ar...   107   4e-22
tr|A9Q9L0|A9Q9L0_PHYPA High mobility group protein B3 OS=Physcom...   107   5e-22
tr|Q2L6T4|Q2L6T4_ARATH Uncharacterized protein At1g20696.2 OS=Ar...   107   7e-22
tr|Q5NKN3|Q5NKN3_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=...   105   2e-21
tr|O04692|O04692_TOBAC DNA-binding protein OS=Nicotiana tabacum ...   105   2e-21
tr|A7QQN2|A7QQN2_VITVI Chromosome undetermined scaffold_143, who...   105   2e-21
tr|O04418|O04418_MAIZE HMGd1 protein (Putative uncharacterized p...   105   3e-21
tr|Q8W512|Q8W512_MAIZE HMG-like nucleosome/chromatin assembly fa...   104   3e-21
tr|Q9ZSU6|Q9ZSU6_ORYSA High mobility group protein OS=Oryza sati...   103   7e-21
tr|Q8H6F1|Q8H6F1_ORYSI HMG1 protein (HMGB1) OS=Oryza sativa subs...   103   7e-21
tr|Q5Z7N3|Q5Z7N3_ORYSJ Os06g0728000 protein OS=Oryza sativa subs...   103   7e-21

>tr|A9NN63|A9NN63_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 154

 Score =  135 bits (341), Expect = 1e-30
 Identities = 65/123 (52%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
 Frame = +1

Query: 7   LEETRVKR-ASEAKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIY 183
           +++ + KR A++  + K+AE K++L    +K  KRQ++ + +  KDPN+PKR PTAFF+Y
Sbjct: 1   MKDAKAKRTAAKDTKNKNAEAKKKLLSAKEKPNKRQAKPKAV--KDPNQPKRPPTAFFVY 58

Query: 184 LEDFRKIYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALAIISP 363
           LE+FRK +K++HPDVKGV AVGKACGDKWKEMS+ EKAPY+ KAA KRA+Y+  +     
Sbjct: 59  LEEFRKTFKQKHPDVKGVTAVGKACGDKWKEMSEAEKAPYLAKAAQKRAEYDVTMTAYKK 118

Query: 364 ETE 372
           + E
Sbjct: 119 KQE 121


>tr|A5BN89|A5BN89_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_023376 PE=4 SV=1
          Length = 166

 Score =  125 bits (314), Expect = 2e-27
 Identities = 59/123 (47%), Positives = 90/123 (73%), Gaps = 8/123 (6%)
 Frame = +1

Query: 28  RASEAKEIKDAEK--------KQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIY 183
           +A+  K+ K+A K        K++ ++K  K  K+ ++KE++ KKDPNKPKR P+AFF++
Sbjct: 7   KAAARKDKKEALKPVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPPSAFFVF 66

Query: 184 LEDFRKIYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALAIISP 363
           LE+FRK+YK+EHP+VK V+AVGKA G+KWK +S+ +KAPY  KAA +++ YEK +A  + 
Sbjct: 67  LEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEKLMAAYNK 126

Query: 364 ETE 372
           + E
Sbjct: 127 KQE 129


>tr|Q3EAL6|Q3EAL6_ARATH Uncharacterized protein At3g51880.2
           OS=Arabidopsis thaliana GN=At3g51880 PE=4 SV=1
          Length = 185

 Score =  125 bits (313), Expect = 2e-27
 Identities = 61/110 (55%), Positives = 80/110 (72%)
 Frame = +1

Query: 19  RVKRASEAKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFR 198
           +VK   EA +  D  K  +     +K  KR++RKE+  KKDPNKPKRAP+AFF++LEDFR
Sbjct: 9   KVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 68

Query: 199 KIYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKAL 348
             +K+E+P+VK V+AVGKA G KWK MS  EKAPY EKAA ++A+YEK +
Sbjct: 69  VTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQM 118


>tr|O49595|O49595_ARATH HMG protein (At3g51880/ORF13) (Putative
           uncharacterized protein) OS=Arabidopsis thaliana
           GN=HMGalpha PE=2 SV=1
          Length = 178

 Score =  125 bits (313), Expect = 2e-27
 Identities = 61/110 (55%), Positives = 80/110 (72%)
 Frame = +1

Query: 19  RVKRASEAKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFR 198
           +VK   EA +  D  K  +     +K  KR++RKE+  KKDPNKPKRAP+AFF++LEDFR
Sbjct: 9   KVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 68

Query: 199 KIYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKAL 348
             +K+E+P+VK V+AVGKA G KWK MS  EKAPY EKAA ++A+YEK +
Sbjct: 69  VTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQM 118


>tr|A5BH86|A5BH86_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_023651 PE=4 SV=1
          Length = 168

 Score =  120 bits (300), Expect = 8e-26
 Identities = 58/119 (48%), Positives = 86/119 (72%), Gaps = 4/119 (3%)
 Frame = +1

Query: 28  RASEAKEIKDAEK----KQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDF 195
           R    + +K AE     K++ +VK +K  KR + K++  KKDPNKPKR P+AFF++LE+F
Sbjct: 11  RRDTKEALKPAEDRKIGKRKAAVKAEKSSKRATTKDKKAKKDPNKPKRPPSAFFVFLEEF 70

Query: 196 RKIYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALAIISPETE 372
           RK++K+E+P+VK V+AVGKA G++WK +S+ EKAPY  KAA K+A+YEK +   + + E
Sbjct: 71  RKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEKIMNAYNKKQE 129


>tr|A9PD85|A9PD85_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 171

 Score =  117 bits (294), Expect = 4e-25
 Identities = 61/128 (47%), Positives = 86/128 (67%), Gaps = 13/128 (10%)
 Frame = +1

Query: 28  RASEAKEIKDAEKKQ-QLSVKDQKVRKRQSR------------KERIEKKDPNKPKRAPT 168
           + ++ K     EKK+  L V+D+K+ KR++             KE+I KKDP+KPKR P+
Sbjct: 2   KTAKGKGAARTEKKEVSLPVEDRKIGKRKAALKATESSKKRAAKEKITKKDPDKPKRPPS 61

Query: 169 AFFIYLEDFRKIYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKAL 348
           +FF++LE+FRKIYK+EHP++K V+AVGKA G+KWK MS  EKAPY  KAA K++ Y K +
Sbjct: 62  SFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKAPYEAKAAIKKSDYGKLM 121

Query: 349 AIISPETE 372
              S + E
Sbjct: 122 TAYSKKQE 129


>tr|A9NK65|A9NK65_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 157

 Score =  117 bits (293), Expect = 5e-25
 Identities = 52/95 (54%), Positives = 72/95 (75%)
 Frame = +1

Query: 67  KQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFRKIYKEEHPDVKGVAAV 246
           K++ + K+ KV  RQ +K R   KDPNKPKR  +AFF+++EDFRK YKE++P+VK V+ V
Sbjct: 24  KRKTAAKESKVSSRQEKKGRKAAKDPNKPKRPASAFFVFMEDFRKTYKEKNPNVKSVSVV 83

Query: 247 GKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALA 351
           GKA GDKWK MS+ +KAPY+ KA  ++ +YEK +A
Sbjct: 84  GKAGGDKWKSMSEADKAPYVAKAGKRKTEYEKNMA 118


>tr|A9NTD7|A9NTD7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 220

 Score =  114 bits (285), Expect = 4e-24
 Identities = 58/114 (50%), Positives = 79/114 (69%)
 Frame = +1

Query: 10  EETRVKRASEAKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLE 189
           +ET+   A +  E K A+KK      D+K +KR   K+    +DPN+PK+  TAFF++++
Sbjct: 68  KETKHADAQKPPEAKKAKKKSA----DEKPKKRTREKKA---RDPNQPKKPATAFFVFMD 120

Query: 190 DFRKIYKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALA 351
           DFRK YKE +PDVKG A VGK  G KWK MSDE+K PY+EKAA  +A+YEKA++
Sbjct: 121 DFRKTYKETNPDVKGAAQVGKEGGLKWKAMSDEDKKPYLEKAAELKAEYEKAMS 174


>tr|Q1EMR5|Q1EMR5_PLAMJ HMG-protein (Fragment) OS=Plantago major
           GN=hmg1 PE=2 SV=1
          Length = 212

 Score =  114 bits (284), Expect = 5e-24
 Identities = 51/115 (44%), Positives = 82/115 (71%)
 Frame = +1

Query: 28  RASEAKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFRKIY 207
           R    K + D +  ++ +    KV+K  ++K++  KKDPNKPKR P+AFF++LE+FR+ +
Sbjct: 58  RKETLKPVDDRKVGKRKAAAAPKVKKPAAKKDKKAKKDPNKPKRPPSAFFVFLEEFRQTF 117

Query: 208 KEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALAIISPETE 372
           K+E+P++K V+AVGKA G+KWK ++D EKAPY  KAA ++++YEK +   + + E
Sbjct: 118 KKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEYEKLMNAYNKKQE 172


>tr|A9NY59|A9NY59_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 151

 Score =  114 bits (284), Expect = 5e-24
 Identities = 55/116 (47%), Positives = 81/116 (69%)
 Frame = +1

Query: 25  KRASEAKEIKDAEKKQQLSVKDQKVRKRQSRKERIEKKDPNKPKRAPTAFFIYLEDFRKI 204
           K   E K   D +  ++    D +V KRQ +KE+  KKDPNKPKR P+AFF++L++FRK 
Sbjct: 5   KAKVEQKLAGDKKTGKRKPATDTQV-KRQIKKEKKAKKDPNKPKRPPSAFFVFLDEFRKE 63

Query: 205 YKEEHPDVKGVAAVGKACGDKWKEMSDEEKAPYIEKAAHKRAKYEKALAIISPETE 372
           YK+ +P+   V+AVGKA G+KW+ +SD EKAPY+ KA  K+A+YEK++A  + + +
Sbjct: 64  YKQANPNANSVSAVGKAGGEKWRALSDAEKAPYVAKAEKKKAEYEKSMATYNKQKD 119