DK950988 |
Clone id |
TST38A01NGRL0010_C24 |
Library |
TST38 |
Length |
680 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_C24. 5' end sequence. |
Accession |
DK950988 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
CAGAAGGATTTTGAGAGTGCAAAATTACACTGGTCTCTTGCCATAGCAAAGCAAATAGAT CTAAGCAGTTGGGATTCATTTGAGATGTTGAAGCTTTTTCATAAAGCCGAGAAGACAATG GAGGAAGCAGCAGATTTGGTAGAAATGCAAGAATGCAGTACCAAGGAGATCAAATCTTCT GCTGAAGAGATGGAGGATGCTGGTAAATCTCAAGGCAATGGTAATGCTGATCGAGCTAAG TCGACTTTTGGACAAGATGTAGCTTTAAAAGCGCAGGTTTATCTATTTTGGGGAAATATA CTGTATGAGCATTCGCAGGTGGTGTTCAGGCTAGGACTTCCATCTTGGAAAGAGCTGCTG GATGCTGCTGTAGAGAAATTTGAAGTCGCTGGAGCCTCTCCTTTGGATGTCTCAACAGCC TTACAGAAGCATCTCTCTAACTCTGCGGTGTTCTTGGAGGCAGCGGAAAGGATTGGTCAG GAAGAGGGTCCTAATGATGAGAAGGACAAGGTAGATAATCCCGTAGAACCTGCTCAAAAG GTTGTTGTCCATGACTTCTTAGCTGAAGATGACAACACAACTGAGAGGGAAATGACCAGC AATGATGATCGGATTTTTGATGACATGATTGCGTTAGAGCATTAAGTGGACATGTGCTCG CATGATTGTGTTTGAGCATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5XG71 |
Definition |
sp|Q5XG71|UTP20_MOUSE Small subunit processome component 20 homolog OS=Mus musculus |
Align length |
148 |
Score (bit) |
35.8 |
E-value |
0.22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6K464 |
Definition |
tr|Q6K464|Q6K464_ORYSJ Os09g0135400 protein OS=Oryza sativa subsp. japonica |
Align length |
152 |
Score (bit) |
125.0 |
E-value |
2.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950988|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_C24, 5' (680 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6K464|Q6K464_ORYSJ Os09g0135400 protein OS=Oryza sativa subs... 125 2e-27 tr|A3BWB0|A3BWB0_ORYSJ Putative uncharacterized protein OS=Oryza... 125 2e-27 tr|Q56W52|Q56W52_ARATH Putative uncharacterized protein At1g6239... 124 4e-27 tr|O48802|O48802_ARATH F2401.12 (Putative uncharacterized protei... 124 4e-27 tr|A2YYR3|A2YYR3_ORYSI Putative uncharacterized protein OS=Oryza... 124 4e-27 tr|P92988|P92988_ARATH Putative cytoskeletal protein OS=Arabidop... 122 2e-26 tr|B4F8M5|B4F8M5_MAIZE Putative uncharacterized protein OS=Zea m... 119 1e-25 tr|A7P620|A7P620_VITVI Chromosome chr4 scaffold_6, whole genome ... 114 7e-24 tr|O49385|O49385_ARATH Putative uncharacterized protein F10N7.12... 105 3e-21 tr|Q0IZQ4|Q0IZQ4_ORYSJ Os09g0556200 protein OS=Oryza sativa subs... 104 5e-21 tr|A3C1D8|A3C1D8_ORYSJ Putative uncharacterized protein OS=Oryza... 104 5e-21 tr|A2Z3Y3|A2Z3Y3_ORYSI Putative uncharacterized protein OS=Oryza... 104 5e-21 tr|Q9SIR4|Q9SIR4_ARATH Putative uncharacterized protein At2g2529... 101 5e-20 tr|Q2HTI5|Q2HTI5_MEDTR Octicosapeptide/Phox/Bem1p OS=Medicago tr... 100 1e-19 tr|Q69QX2|Q69QX2_ORYSJ cDNA clone:J033046B22, full insert sequen... 92 2e-17 tr|Q0J6M3|Q0J6M3_ORYSJ Os08g0296900 protein (Fragment) OS=Oryza ... 92 2e-17 tr|A2YTN2|A2YTN2_ORYSI Putative uncharacterized protein OS=Oryza... 91 7e-17 tr|Q6K378|Q6K378_ORYSJ Tetratricopeptide repeat protein-like (Pu... 91 9e-17 tr|A2YYL8|A2YYL8_ORYSI Putative uncharacterized protein OS=Oryza... 91 9e-17 tr|A2YTN6|A2YTN6_ORYSI Putative uncharacterized protein OS=Oryza... 90 2e-16 tr|A7QTK8|A7QTK8_VITVI Chromosome chr11 scaffold_170, whole geno... 83 1e-14 tr|Q3E9A2|Q3E9A2_ARATH Uncharacterized protein At5g20360.1 OS=Ar... 69 2e-10 tr|A7R257|A7R257_VITVI Chromosome undetermined scaffold_404, who... 68 5e-10 tr|A4RR59|A4RR59_OSTLU Predicted protein OS=Ostreococcus lucimar... 58 5e-07 tr|Q01GG8|Q01GG8_OSTTA Octicosapeptide/Phox/Bem1p (ISS) OS=Ostre... 55 5e-06 tr|Q01FS0|Q01FS0_OSTTA Molecular co-chaperone STI1 (ISS) OS=Ostr... 51 6e-05 tr|A4RRV0|A4RRV0_OSTLU Predicted protein (Fragment) OS=Ostreococ... 51 6e-05 tr|A3BRP8|A3BRP8_ORYSJ Putative uncharacterized protein OS=Oryza... 51 6e-05 tr|A8IBF6|A8IBF6_CHLRE Predicted protein OS=Chlamydomonas reinha... 46 0.002 tr|B8LPT9|B8LPT9_PICSI Putative uncharacterized protein OS=Picea... 45 0.004
>tr|Q6K464|Q6K464_ORYSJ Os09g0135400 protein OS=Oryza sativa subsp. japonica GN=P0006E02.16 PE=4 SV=1 Length = 544
Score = 125 bits (315), Expect = 2e-27 Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 4/152 (2%) Frame = +1
Query: 1 QKDFESAKLHWSLAIAKQIDLSSWDSFEMLKLFHKAEKTMEEAADLVE-MQECSTKEIKS 177 Q+ FE+AKLHWS A+A ++DLS+WDS + KLF AE M A ++ E ++E E+K Sbjct: 362 QQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAELKE 421
Query: 178 SAEEMEDAGKSQGNGNAD---RAKSTFGQDVALKAQVYLFWGNILYEHSQVVFRLGLPSW 348 + E K Q N + + Q ++ Q++LFWGN+L+E SQV F+L + W Sbjct: 422 PSSEALKKRKKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDIADW 481
Query: 349 KELLDAAVEKFEVAGASPLDVSTALQKHLSNS 444 K+ LDA++E+F++AGAS D+S L+ H SN+ Sbjct: 482 KKNLDASIERFKLAGASESDISAVLKNHFSNT 513
>tr|A3BWB0|A3BWB0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027332 PE=4 SV=1 Length = 787
Score = 125 bits (315), Expect = 2e-27 Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 4/152 (2%) Frame = +1
Query: 1 QKDFESAKLHWSLAIAKQIDLSSWDSFEMLKLFHKAEKTMEEAADLVE-MQECSTKEIKS 177 Q+ FE+AKLHWS A+A ++DLS+WDS + KLF AE M A ++ E ++E E+K Sbjct: 605 QQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAELKE 664
Query: 178 SAEEMEDAGKSQGNGNAD---RAKSTFGQDVALKAQVYLFWGNILYEHSQVVFRLGLPSW 348 + E K Q N + + Q ++ Q++LFWGN+L+E SQV F+L + W Sbjct: 665 PSSEALKKRKKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDIADW 724
Query: 349 KELLDAAVEKFEVAGASPLDVSTALQKHLSNS 444 K+ LDA++E+F++AGAS D+S L+ H SN+ Sbjct: 725 KKNLDASIERFKLAGASESDISAVLKNHFSNT 756
>tr|Q56W52|Q56W52_ARATH Putative uncharacterized protein At1g62390 (Fragment) OS=Arabidopsis thaliana GN=At1g62390 PE=2 SV=1 Length = 359
Score = 124 bits (312), Expect = 4e-27 Identities = 67/168 (39%), Positives = 104/168 (61%), Gaps = 11/168 (6%) Frame = +1
Query: 1 QKDFESAKLHWSLAIAKQIDLSSWDSFEMLKLFHKAEKTMEEAADLVE-MQECSTKEIKS 177 Q+ FE AKLHWS +A++ID+S WD E L LF AE M++A ++ E ++E ++K+ Sbjct: 187 QQQFEMAKLHWSYLLAQKIDISGWDPSETLNLFDSAEAKMKDATEMWEKLEEQRMDDLKN 246
Query: 178 ----SAEEMEDAGKSQG-NGNAD-----RAKSTFGQDVALKAQVYLFWGNILYEHSQVVF 327 EE+ K QG +GN + A+ Q A+++Q++LFWGN+L+E SQV Sbjct: 247 PNSNKKEEVSKRRKKQGGDGNEEVSETITAEEAAEQATAMRSQIHLFWGNMLFERSQVEC 306
Query: 328 RLGLPSWKELLDAAVEKFEVAGASPLDVSTALQKHLSNSAVFLEAAER 471 ++G W + LD+AVE+F++AGAS D++T ++ H SN A E E+ Sbjct: 307 KIGKDGWNKNLDSAVERFKLAGASEADIATVVKNHCSNEAAATEGDEK 354
>tr|O48802|O48802_ARATH F2401.12 (Putative uncharacterized protein At1g62390) OS=Arabidopsis thaliana GN=At1g62390 PE=2 SV=1 Length = 751
Score = 124 bits (312), Expect = 4e-27 Identities = 67/168 (39%), Positives = 104/168 (61%), Gaps = 11/168 (6%) Frame = +1
Query: 1 QKDFESAKLHWSLAIAKQIDLSSWDSFEMLKLFHKAEKTMEEAADLVE-MQECSTKEIKS 177 Q+ FE AKLHWS +A++ID+S WD E L LF AE M++A ++ E ++E ++K+ Sbjct: 579 QQQFEMAKLHWSYLLAQKIDISGWDPSETLNLFDSAEAKMKDATEMWEKLEEQRMDDLKN 638
Query: 178 ----SAEEMEDAGKSQG-NGNAD-----RAKSTFGQDVALKAQVYLFWGNILYEHSQVVF 327 EE+ K QG +GN + A+ Q A+++Q++LFWGN+L+E SQV Sbjct: 639 PNSNKKEEVSKRRKKQGGDGNEEVSETITAEEAAEQATAMRSQIHLFWGNMLFERSQVEC 698
Query: 328 RLGLPSWKELLDAAVEKFEVAGASPLDVSTALQKHLSNSAVFLEAAER 471 ++G W + LD+AVE+F++AGAS D++T ++ H SN A E E+ Sbjct: 699 KIGKDGWNKNLDSAVERFKLAGASEADIATVVKNHCSNEAAATEGDEK 746
>tr|A2YYR3|A2YYR3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30481 PE=4 SV=1 Length = 787
Score = 124 bits (312), Expect = 4e-27 Identities = 62/152 (40%), Positives = 95/152 (62%), Gaps = 4/152 (2%) Frame = +1
Query: 1 QKDFESAKLHWSLAIAKQIDLSSWDSFEMLKLFHKAEKTMEEAADLVE-MQECSTKEIKS 177 Q+ FE+AKLHWS A+A ++DLS+WDS + KLF AE M A ++ E ++E E+K Sbjct: 605 QQHFETAKLHWSFALADKVDLSAWDSSQTFKLFDSAEHKMRAATEMWEKVEEQRMAELKE 664
Query: 178 SAEEMEDAGKSQGNGNAD---RAKSTFGQDVALKAQVYLFWGNILYEHSQVVFRLGLPSW 348 + E + Q N + + Q ++ Q++LFWGN+L+E SQV F+L + W Sbjct: 665 PSSEALKKRRKQHNADGQGELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLDIADW 724
Query: 349 KELLDAAVEKFEVAGASPLDVSTALQKHLSNS 444 K+ LDA++E+F++AGAS D+S L+ H SN+ Sbjct: 725 KKNLDASIERFKLAGASESDISAVLKNHFSNT 756
>tr|P92988|P92988_ARATH Putative cytoskeletal protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 782
Score = 122 bits (307), Expect = 2e-26 Identities = 66/164 (40%), Positives = 102/164 (62%), Gaps = 11/164 (6%) Frame = +1
Query: 1 QKDFESAKLHWSLAIAKQIDLSSWDSFEMLKLFHKAEKTMEEAADLVE-MQECSTKEIKS 177 Q+ FE AKLHWS +A++ID+S WD E L LF AE M++A ++ E ++E ++K+ Sbjct: 580 QQQFEMAKLHWSYLLAQKIDISGWDPSETLNLFDSAEAKMKDATEMWEKLEEQRMDDLKN 639
Query: 178 ----SAEEMEDAGKSQG-NGNAD-----RAKSTFGQDVALKAQVYLFWGNILYEHSQVVF 327 EE+ K QG +GN + A+ Q A+++Q++LFWGN+L+E SQV Sbjct: 640 PNSNKKEEVSKRRKKQGGDGNEEVSETITAEEAAEQATAMRSQIHLFWGNMLFERSQVEC 699
Query: 328 RLGLPSWKELLDAAVEKFEVAGASPLDVSTALQKHLSNSAVFLE 459 ++G W + LD+AVE+F++AGAS D++T ++ H SN A E Sbjct: 700 KIGKDGWNKNLDSAVERFKLAGASEADIATVVKNHCSNEAAATE 743
>tr|B4F8M5|B4F8M5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 507
Score = 119 bits (299), Expect = 1e-25 Identities = 65/155 (41%), Positives = 97/155 (62%), Gaps = 6/155 (3%) Frame = +1
Query: 1 QKDFESAKLHWSLAIAKQIDLSSWDSFEMLKLFHKAEKTMEEAADLVE-MQECSTKEIKS 177 Q+ FE+AKLHWS A+A + DLS+WDS E KLF AE+ M A ++ E ++E E+K Sbjct: 323 QQHFETAKLHWSYALADKADLSTWDSLETFKLFDSAEQNMRAATEMWEKVEEQRMAELKE 382
Query: 178 -SAEEMEDAGKSQGNGNADRAKST----FGQDVALKAQVYLFWGNILYEHSQVVFRLGLP 342 A + + + + +G + + T Q ++ Q++LFWGN+L+E SQV F+L + Sbjct: 383 PGACDKDGVLRKRQHGAGGQPELTPEEAAEQAAVMRQQIHLFWGNMLFERSQVEFKLSVG 442
Query: 343 SWKELLDAAVEKFEVAGASPLDVSTALQKHLSNSA 447 WK LDA+VE+F++AGAS D+ T L+ H SN A Sbjct: 443 DWKTNLDASVERFKLAGASESDILTVLKNHFSNVA 477
>tr|A7P620|A7P620_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032749001 PE=4 SV=1 Length = 682
Score = 114 bits (284), Expect = 7e-24 Identities = 64/154 (41%), Positives = 92/154 (59%), Gaps = 5/154 (3%) Frame = +1
Query: 1 QKDFESAKLHWSLAIAKQIDLSSWDSFEMLKLFHKAEKTMEEAADLVEMQECSTKEIKSS 180 Q+ FE AKL W AI +IDL S S E+L+L++KAE +ME ++ +E + + Sbjct: 479 QQQFEQAKLSWYYAIGCKIDLESGPSMEVLQLYNKAEDSMERG--MLMWEEMEERRLNGL 536
Query: 181 AEEMEDAGKSQGNGNADRAKSTFGQDVA-----LKAQVYLFWGNILYEHSQVVFRLGLPS 345 ++ + + Q G K DVA +K+Q+YL WG +LYE S V F+LGL S Sbjct: 537 SKLDKYQAQLQKMGLDALFKDISASDVAEQAANMKSQIYLLWGTLLYERSIVEFKLGLLS 596
Query: 346 WKELLDAAVEKFEVAGASPLDVSTALQKHLSNSA 447 W+E L+ AVEKFE+AGASP D++ ++ H SN A Sbjct: 597 WEECLEVAVEKFELAGASPTDIAVMIKNHCSNGA 630
>tr|O49385|O49385_ARATH Putative uncharacterized protein F10N7.120 (Putative uncharacterized protein AT4g32070) OS=Arabidopsis thaliana GN=F10N7.120 PE=2 SV=1 Length = 811
Score = 105 bits (261), Expect = 3e-21 Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 3/152 (1%) Frame = +1
Query: 1 QKDFESAKLHWSLAIAKQIDLSSWDSFEMLKLFHKAEKTMEEAADL-VEMQECSTKEIKS 177 Q+ FE AKL W A+ ++DL S S E+LKL++KAE +ME + EM+EC I Sbjct: 574 QEQFEHAKLCWYHALKSKVDLESEASQEVLKLYNKAEDSMERGMQIWEEMEECRLNGISK 633
Query: 178 SAEEMEDAGKSQGNGNADRA--KSTFGQDVALKAQVYLFWGNILYEHSQVVFRLGLPSWK 351 + K + + A + T Q + +Q+ L WG++LYE S V ++LGLP+W Sbjct: 634 LDKHKNMLRKLELDELFSEASEEETVEQTANMSSQINLLWGSLLYERSIVEYKLGLPTWD 693
Query: 352 ELLDAAVEKFEVAGASPLDVSTALQKHLSNSA 447 E L+ AVEKFE+AGAS D++ ++ H S+ + Sbjct: 694 ECLEVAVEKFELAGASATDIAVMVKNHCSSES 725
>tr|Q0IZQ4|Q0IZQ4_ORYSJ Os09g0556200 protein OS=Oryza sativa subsp. japonica GN=Os09g0556200 PE=4 SV=1 Length = 658
Score = 104 bits (260), Expect = 5e-21 Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 5/149 (3%) Frame = +1
Query: 10 FESAKLHWSLAIAKQIDLSSWDSFEMLKLFHKAEKTMEEAADLVEMQECSTKEIKSSAEE 189 FE AKL W AI +DL +W S E+L+LF+KAE ME ++ E E + +K+ ++ Sbjct: 486 FEQAKLSWYYAIGSSVDLDTWPSSEVLELFNKAEDNMERGTEMWE--EMEEQRLKNRSKP 543
Query: 190 MEDAGKSQGNGNADRAKSTFGQDVA-----LKAQVYLFWGNILYEHSQVVFRLGLPSWKE 354 ++ + G + K D A +++Q+ + WG +LYE S V F+LGLP W++ Sbjct: 544 SQENVVLEKMGLDEYIKDVSTDDAAEQASNMRSQINILWGMLLYERSVVEFKLGLPMWED 603
Query: 355 LLDAAVEKFEVAGASPLDVSTALQKHLSN 441 L AA+EKF++ GAS D++ ++ H +N Sbjct: 604 CLMAAIEKFKLGGASATDIAVLVKNHCAN 632
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