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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950997
Clone id TST38A01NGRL0010_D10
Library
Length 699
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_D10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ACCATATCGGGCTGCGTCTCCTTGACACCGGGGCTTGCCATTTTCATCCTGCTCTGCACA
TTTCTTCATACTCCCAAGCTCCTCTCCCAGCTGCTCTGCAGTACTTCTCTGCATTCTATT
TCGCCACCATCTTTTGCATATACGTAGATCTCCTAGCACTGCGTTTGATTTGCTTCTTTT
CAATACAGCTATGGGCTTTCGGATTGTGCCCGCGCTGCTTGTAGCTTTTGCTTGCATCCA
TTACGTAGCGCTCGCTTCTATCGACGATAACCTCGCTGCCAGCGCCAAGAAATACAAATC
CTGCAAGAAGAGGGCTGCCACTCTCTGCGGGCCTAGCTCCTTCACCTTCTACCTGCACAA
CACCGTCTACAACCCCGCCGTCGACAACGCCNATAACTTCACCTCTGTGTATGGCGTGCA
ACCTAATGTGACGTGGACCAATACCTACGCCTTCGGCACCACCTCCACATTCGAGGACCC
GCTCACAAGCGGGCCCGCCACCGACTCGCAGCAGATAGGCGTAGCTCACGGCTTCTGGCA
GCTCAACAGCAAGGTAGGCTACACTCTCTTCCACATCTTCACCGCCNACATTACCGAGGG
CGACCACAAGGGCACCATCGACATCTTTGGCCAGGTTCGCGAGATCGACCCCGTCCGCTA
CCTCACCGTCATCGGCGGCACAGGCGATTTCCTGGGCGC
■■Homology search results ■■ -
sp_hit_id P13240
Definition sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum
Align length 122
Score (bit) 67.4
E-value 7.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950997|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_D10, 5'
         (699 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13240|DR206_PEA Disease resistance response protein 206 OS=P...    67   7e-11
sp|Q98NF9|ADEC_RHILO Adenine deaminase OS=Rhizobium loti GN=ade ...    34   0.86 

>sp|P13240|DR206_PEA Disease resistance response protein 206
           OS=Pisum sativum GN=PI206 PE=2 SV=2
          Length = 184

 Score = 67.4 bits (163), Expect = 7e-11
 Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
 Frame = +2

Query: 338 SFTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYA----FGTTSTFEDPLTSGPATD 505
           +  FY H+ +YN    NA N TS     P        A    FG    F+DP+T   +  
Sbjct: 33  NLVFYFHDILYNGK--NAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLS 90

Query: 506 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 685
           S+Q+G A GF+  ++K  YT +  FT  +    H+GTI   G    +   R ++V GGTG
Sbjct: 91  SKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQGTITFAGADPIVAKTRDISVTGGTG 150

Query: 686 DF 691
           DF
Sbjct: 151 DF 152


>sp|Q98NF9|ADEC_RHILO Adenine deaminase OS=Rhizobium loti GN=ade
           PE=3 SV=1
          Length = 605

 Score = 33.9 bits (76), Expect = 0.86
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
 Frame = +2

Query: 374 PAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTF-----EDPLTSGPATDSQQIGVAHGFW 538
           P +++A    +V  V   +TW N    G    F      DP+ SG    + + G   G  
Sbjct: 162 PGLEHAGAELTVADVAEAMTWENIIGLGEVMNFPGVAANDPVMSGEIAATVRAGKTVGGH 221

Query: 539 QLNSKVGYTLFHIFTAXITEGDHKGT--IDIFGQVRE 643
             +  +G   FH + A   E DH+GT   D   +VR+
Sbjct: 222 YASRDLGLP-FHGYVAGGPEDDHEGTRAEDAIARVRQ 257
tr_hit_id B2WS85
Definition tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family protein OS=Capsella rubella
Align length 117
Score (bit) 72.4
E-value 3.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950997|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_D10, 5'
         (699 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family prot...    72   3e-11
tr|A8IXC9|A8IXC9_BRACM Disease resistance response protein OS=Br...    70   1e-10
tr|B2WS65|B2WS65_ARAHA Putative disease resistance protein OS=Ar...    70   2e-10
tr|Q9SUQ8|Q9SUQ8_ARATH Putative disease resistance response prot...    69   2e-10
tr|Q9T017|Q9T017_ARATH Putative disease resistance response prot...    69   4e-10
tr|Q9SDQ9|Q9SDQ9_THUPL Dirigent protein OS=Thuja plicata GN=psd_...    68   5e-10
tr|Q9SDQ8|Q9SDQ8_THUPL Dirigent-like protein OS=Thuja plicata GN...    67   1e-09
tr|Q9SDR1|Q9SDR1_THUPL Dirigent-like protein OS=Thuja plicata GN...    67   1e-09
tr|Q9SDR0|Q9SDR0_THUPL Dirigent-like protein OS=Thuja plicata GN...    67   1e-09
tr|Q9SDR5|Q9SDR5_THUPL Dirigent-like protein OS=Thuja plicata GN...    65   3e-09
tr|Q9SDR2|Q9SDR2_THUPL Dirigent-like protein OS=Thuja plicata GN...    65   3e-09
tr|Q9SYU1|Q9SYU1_PEA Pathogenesis-related protein OS=Pisum sativ...    65   4e-09
tr|Q9SDR3|Q9SDR3_THUPL Dirigent-like protein OS=Thuja plicata GN...    64   7e-09
tr|Q27J97|Q27J97_PICSI Dirigent protein pDIR15 OS=Picea sitchens...    64   9e-09
tr|Q27J96|Q27J96_PICSI Dirigent protein pDIR16 OS=Picea sitchens...    64   9e-09
tr|Q943Q0|Q943Q0_ORYSJ Putative uncharacterized protein P0011G08...    64   1e-08
tr|A2ZPF2|A2ZPF2_ORYSJ Putative uncharacterized protein OS=Oryza...    64   1e-08
tr|Q27JA4|Q27JA4_9CONI Dirigent protein pDIR8 OS=Picea engelmann...    63   2e-08
tr|Q27J94|Q27J94_PICGL Dirigent protein pDIR18 OS=Picea glauca P...    63   2e-08
tr|A6YR10|A6YR10_PICSI Dirigent-like protein OS=Picea sitchensis...    63   2e-08
tr|Q9SH66|Q9SH66_ARATH F22C12.8 (Putative dirigent protein) (At1...    63   2e-08
tr|A6YR09|A6YR09_PICSI Dirigent-like protein OS=Picea sitchensis...    63   2e-08
tr|Q9T019|Q9T019_ARATH Putative disease resistance response prot...    62   3e-08
tr|Q27J93|Q27J93_PICSI Dirigent protein pDIR19 (Fragment) OS=Pic...    62   4e-08
tr|O82498|O82498_ARATH F2P3.6 protein (Putative disease resistan...    62   4e-08
tr|A2WKV1|A2WKV1_ORYSI Putative uncharacterized protein OS=Oryza...    62   4e-08
tr|Q27JA7|Q27JA7_9CONI Dirigent protein pDIR5 OS=Picea engelmann...    62   5e-08
tr|B7FHC7|B7FHC7_MEDTR Putative uncharacterized protein OS=Medic...    61   8e-08
tr|Q9SDQ7|Q9SDQ7_TSUHE Dirigent-like protein OS=Tsuga heterophyl...    60   1e-07
tr|A6YR08|A6YR08_PICSI Dirigent-like protein OS=Picea sitchensis...    60   1e-07

>tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family protein
           OS=Capsella rubella GN=6J23.5 PE=4 SV=1
          Length = 187

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 40/117 (34%), Positives = 61/117 (52%)
 Frame = +2

Query: 341 FTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 520
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+DP+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDDPITMDKNYLSEPVA 98

Query: 521 VAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTGDF 691
            A GF+  + K+ +  +  +T       HKGT++I G    ++P R L+V+GGTGDF
Sbjct: 99  RAQGFYFYDMKMDFNAWFCYTLVFNSTQHKGTLNIMGADLMMEPTRDLSVVGGTGDF 155


>tr|A8IXC9|A8IXC9_BRACM Disease resistance response protein
           OS=Brassica campestris PE=2 SV=1
          Length = 187

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/117 (34%), Positives = 60/117 (51%)
 Frame = +2

Query: 341 FTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 520
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+ P+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDGPITMDKNYLSEPVA 98

Query: 521 VAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTGDF 691
            A GF+  + K  +  +  FT      +HKGT++I G    ++P R L+V+GGTGDF
Sbjct: 99  RAQGFYFYDMKTDFNSWFSFTLVFNSTEHKGTLNIMGADLMMEPTRDLSVVGGTGDF 155


>tr|B2WS65|B2WS65_ARAHA Putative disease resistance protein
           OS=Arabidopsis halleri GN=8F2.4 PE=4 SV=1
          Length = 187

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/117 (33%), Positives = 61/117 (52%)
 Frame = +2

Query: 341 FTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 520
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+ P+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDGPITMDKNYLSKPLA 98

Query: 521 VAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTGDF 691
            A GF+  + K+ +  +  +T      +HKGT++I G    ++P R L+V+GGTGDF
Sbjct: 99  RAQGFYFYDMKMDFNAWFCYTLVFNSTEHKGTLNIMGADLMMEPTRDLSVVGGTGDF 155


>tr|Q9SUQ8|Q9SUQ8_ARATH Putative disease resistance response protein
           OS=Arabidopsis thaliana GN=F9D16.160 PE=2 SV=1
          Length = 187

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 39/117 (33%), Positives = 61/117 (52%)
 Frame = +2

Query: 341 FTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 520
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+ P+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDGPITMDKNYLSKPVA 98

Query: 521 VAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTGDF 691
            A GF+  + K+ +  +  +T      +HKGT++I G    ++P R L+V+GGTGDF
Sbjct: 99  RAQGFYFYDMKMDFNSWFSYTLVFNSTEHKGTLNIMGADLMMEPTRDLSVVGGTGDF 155


>tr|Q9T017|Q9T017_ARATH Putative disease resistance response protein
           (At4g11190) OS=Arabidopsis thaliana GN=AT4g11190 PE=2
           SV=1
          Length = 184

 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 39/118 (33%), Positives = 59/118 (50%)
 Frame = +2

Query: 341 FTFYLHNTVYNPAVDNAXNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 520
           F FYLHN  Y+   DN  N TS   V P       ++FG     ++P+T      S+Q+ 
Sbjct: 39  FVFYLHNVAYDG--DNTDNATSAAIVNP--LGLGDFSFGKFVIMDNPVTMDQNMLSEQVA 94

Query: 521 VAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTGDFL 694
              GF+  + K  Y  +  ++       HKG ++I G+   ++P R L V+GGTGDF+
Sbjct: 95  RVQGFFFYHGKTKYDTWLSWSVVFNSTQHKGALNIMGENAFMEPTRDLPVVGGTGDFV 152


>tr|Q9SDQ9|Q9SDQ9_THUPL Dirigent protein OS=Thuja plicata GN=psd_Tp7
           PE=2 SV=1
          Length = 192

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
 Frame = +2

Query: 338 SFTFYLHNTVYNPAVDNAXNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 505
           +   Y H+ +YN    NA N TS     P   N+T  T  Y FG  S F+DP+T      
Sbjct: 41  NLVLYFHDIIYNGK--NAGNATSTLVAAPQGANLTIMTGNYHFGDLSVFDDPITVDNNLH 98

Query: 506 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 685
           S  +G A GF+  + K  ++ +  FT  +   D+KGTI   G    +   R ++V+GGTG
Sbjct: 99  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDYKGTITFGGADPILAKYRDISVVGGTG 158

Query: 686 DFL 694
           DFL
Sbjct: 159 DFL 161


>tr|Q9SDQ8|Q9SDQ8_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp8 PE=2 SV=1
          Length = 192

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
 Frame = +2

Query: 338 SFTFYLHNTVYNPAVDNAXNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 505
           +   Y H+ +YN    NA N TS     P   N+T  T  Y FG  + F+DP+T      
Sbjct: 41  NLVLYFHDIIYNGK--NAGNATSTLVAAPQGANLTIMTGNYHFGDLAVFDDPITVDNNLH 98

Query: 506 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 685
           S  +G A GF+  + K  ++ +  FT  +   D+KGTI   G    +   R ++V+GGTG
Sbjct: 99  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDYKGTITFGGADPILAKYRDISVVGGTG 158

Query: 686 DFL 694
           DFL
Sbjct: 159 DFL 161


>tr|Q9SDR1|Q9SDR1_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp5 PE=2 SV=1
          Length = 190

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
 Frame = +2

Query: 338 SFTFYLHNTVYNPAVDNAXNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 505
           +   Y H+ +YN    NA N TS     P   N+T  T    FG  + F+DP+T      
Sbjct: 39  NLVLYFHDIIYNGK--NAENATSALVAAPEGANLTIMTGNNHFGNLAVFDDPITLDNNLH 96

Query: 506 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 685
           S  +G A GF+  + K  ++ +  FT  +   DHKGTI   G    +   R ++V+GGTG
Sbjct: 97  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDHKGTITFNGADPILTKYRDISVVGGTG 156

Query: 686 DFL 694
           DFL
Sbjct: 157 DFL 159


>tr|Q9SDR0|Q9SDR0_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp6 PE=2 SV=1
          Length = 190

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
 Frame = +2

Query: 338 SFTFYLHNTVYNPAVDNAXNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 505
           +   Y H+ +YN    NA N TS     P   N+T  T    FG  + F+DP+T      
Sbjct: 39  NLVLYFHDIIYNGK--NAENATSALVAAPEGANLTIMTGNNHFGNLAVFDDPITLDNNLH 96

Query: 506 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 685
           S  +G A GF+  + K  ++ +  FT  +   DHKGTI   G    +   R ++V+GGTG
Sbjct: 97  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDHKGTITFNGADPILTKYRDISVVGGTG 156

Query: 686 DFL 694
           DFL
Sbjct: 157 DFL 159


>tr|Q9SDR5|Q9SDR5_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp1 PE=2 SV=1
          Length = 189

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
 Frame = +2

Query: 338 SFTFYLHNTVYNPAVDNAXNFTSVYGVQPN----VTWTNTYAFGTTSTFEDPLTSGPATD 505
           +   Y H+ +YN    N  N T+     P      T+   + FG    F+DP+T      
Sbjct: 38  NLVLYFHDILYNGK--NIHNATAALVAAPAWGNLTTFAEPFKFGDVVVFDDPITLDNNLH 95

Query: 506 SQQIGVAHGFWQLNSKVGYTLFHIFTAXITEGDHKGTIDIFGQVREIDPVRYLTVIGGTG 685
           S  +G A GF+  N K  Y  +  FT  +   D+KGTI   G    +   R ++V+GGTG
Sbjct: 96  SPPVGRAQGFYLYNMKTTYNAWLGFTFVLNSTDYKGTITFNGADPPLVKYRDISVVGGTG 155

Query: 686 DFL 694
           DFL
Sbjct: 156 DFL 158