DK951001
Clone id TST38A01NGRL0010_D15
Library
Length 665
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_D15. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
TGTACAAAAAAGTTGGGAGAGAGAGAGAGAGAGCGGAAGATGGCAGGCGATGAAGGGGGA
GGCGGAGAAGGAGCGGAAGAGGATGTGCCCAGAGATGCGAAGTTGGTGAAGAGCATTCTG
AGGTCCATGGGTGTAAAGCAGCACGAGCCGCGCGTGGTGCAACAATTCCTCGATTTTTGC
TACCGCTATGTTGTGGAGGTCCTCGGGGATGCCCAACTCTATTCCGAACACGCCTCGAAG
CCCTCAATTGACACCGAAGATGTCAAGCTTGCCATCCAGTCCCGTGTCACTTTCTCATTC
TCGCAACCCCCTTCCCGTGAGACTCTCATGGAGCTTGCCAGGGTTCGGAATAGCATGCCG
GTGCCAAAGGTGATCAGTGGACCTGGTATAGCATTGCCACCAGAGCAAGATTCATTGATT
GCTCCCAACTATCAGCTAGTTGTACCAATGAAGCAAGCAGATGAGATGGAAGTGGATGAC
AAGGATGGGAATAAACCACCGCTTCCAACAGACAAGAATGGCATGTCATCACCTGCATCA
CAGCAAGGTTTAGAGCAAGATGGGTCTAAGAAGGTCTCATTTAGTCTTGCTGGGAAGCGA
CCCCGGAGCTAGTTGGCCTCACATGGGTATTAAAAGCTTTTGTCACCCAGAATTGCTTGT
ATATC
■■Homology search results ■■ -
sp_hit_id Q5BKE0
Definition sp|Q5BKE0|TAF9_RAT Transcription initiation factor TFIID subunit 9 OS=Rattus norvegicus
Align length 125
Score (bit) 128.0
E-value 2.0e-29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951001|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_D15, 5'
(649 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5BKE0|TAF9_RAT Transcription initiation factor TFIID subunit... 128 2e-29
sp|Q8VI33|TAF9_MOUSE Transcription initiation factor TFIID subun... 125 2e-28
sp|Q16594|TAF9_HUMAN Transcription initiation factor TFIID subun... 125 2e-28
sp|Q17QQ4|TAF9_BOVIN Transcription initiation factor TFIID subun... 125 2e-28
sp|Q5R7P7|TAF9B_PONAB Transcription initiation factor TFIID subu... 125 2e-28
sp|Q6NZA9|TAF9B_MOUSE Transcription initiation factor TFIID subu... 125 2e-28
sp|Q9HBM6|TAF9B_HUMAN Transcription initiation factor TFIID subu... 125 2e-28
sp|Q62880|TAF9B_RAT Transcription initiation factor TFIID subuni... 124 3e-28
sp|Q27272|TAF9_DROME Transcription initiation factor TFIID subun... 110 5e-24
sp|Q09869|TAF9_SCHPO Transcription initiation factor TFIID subun... 97 9e-20
sp|Q05027|TAF9_YEAST Transcription initiation factor TFIID subun... 82 2e-15
sp|P61882|HARA_PYRFU Archaeal histone A OS=Pyrococcus furiosus G... 37 0.068
sp|P61881|HARA_PYRAB Archaeal histone A OS=Pyrococcus abyssi GN=... 37 0.068
sp|O74098|HARA_PYRHO Archaeal histone A OS=Pyrococcus horikoshii... 37 0.089
sp|P0C8M8|CCR1_MAIZE Probable serine/threonine-protein kinase CC... 37 0.12
sp|P50485|HARA_PYRSG Archaeal histone A OS=Pyrococcus sp. (strai... 36 0.15
sp|Q9ERE9|JIP2_MOUSE C-jun-amino-terminal kinase-interacting pro... 35 0.26
sp|Q96PX9|PKH4B_HUMAN Pleckstrin homology domain-containing fami... 34 0.58
sp|O14340|YB35_SCHPO Oxysterol-binding protein homolog C2F12.05c... 34 0.75
sp|Q4KM52|BLNK_RAT B-cell linker protein OS=Rattus norvegicus GN... 34 0.75
sp|Q9QUN3|BLNK_MOUSE B-cell linker protein OS=Mus musculus GN=Bl... 34 0.75
sp|Q8WV28|BLNK_HUMAN B-cell linker protein OS=Homo sapiens GN=BL... 33 0.98
sp|Q9Y8I1|HARA_PYRKO Archaeal histone A OS=Pyrococcus kodakaraen... 33 1.3
sp|P95669|HANA_THEZI Archaeal histone HAN1 subunit A OS=Thermoco... 33 1.3
sp|A6US71|DAPA_METVS Dihydrodipicolinate synthase OS=Methanococc... 33 1.3
sp|Q8TUZ4|DAPA_METKA Dihydrodipicolinate synthase OS=Methanopyru... 33 1.7
sp|Q13387|JIP2_HUMAN C-jun-amino-terminal kinase-interacting pro... 32 2.2
sp|P40287|H4_ENTHI Histone H4 OS=Entamoeba histolytica PE=3 SV=1 32 2.2
sp|P22293|SUS_DROME Protein suppressor of sable OS=Drosophila me... 32 2.9
sp|B5Z0Y5|RODZ_ECO5E Cytoskeleton protein rodZ OS=Escherichia co... 32 2.9

>sp|Q5BKE0|TAF9_RAT Transcription initiation factor TFIID subunit 9
OS=Rattus norvegicus GN=Taf9 PE=2 SV=1
Length = 264

Score = 128 bits (322), Expect = 2e-29
Identities = 58/125 (46%), Positives = 88/125 (70%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
+P+DA+++ IL+ MG+ ++EPRV+ Q L+F +RYV +L DA++YS HA KP++D +DV
Sbjct: 12 MPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDADDV 71

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQLVV 428
+LAIQ R SF+ PP R+ L+++AR RN P+P + G LPP++ L APNY+L
Sbjct: 72 RLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRLKS 131

Query: 429 PMKQA 443
K+A
Sbjct: 132 LQKKA 136


>sp|Q8VI33|TAF9_MOUSE Transcription initiation factor TFIID subunit
9 OS=Mus musculus GN=Taf9 PE=2 SV=1
Length = 264

Score = 125 bits (314), Expect = 2e-28
Identities = 57/125 (45%), Positives = 87/125 (69%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
+P+DA+++ IL+ MG+ ++EPRV+ Q L+F +RYV +L DA++YS HA K ++D +DV
Sbjct: 12 MPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDV 71

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQLVV 428
+LAIQ R SF+ PP R+ L+++AR RN P+P + G LPP++ L APNY+L
Sbjct: 72 RLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRLKS 131

Query: 429 PMKQA 443
K+A
Sbjct: 132 LQKKA 136


>sp|Q16594|TAF9_HUMAN Transcription initiation factor TFIID subunit
9 OS=Homo sapiens GN=TAF9 PE=1 SV=1
Length = 264

Score = 125 bits (314), Expect = 2e-28
Identities = 57/125 (45%), Positives = 87/125 (69%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
+P+DA+++ IL+ MG+ ++EPRV+ Q L+F +RYV +L DA++YS HA K ++D +DV
Sbjct: 12 MPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDV 71

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQLVV 428
+LAIQ R SF+ PP R+ L+++AR RN P+P + G LPP++ L APNY+L
Sbjct: 72 RLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRLKS 131

Query: 429 PMKQA 443
K+A
Sbjct: 132 LQKKA 136


>sp|Q17QQ4|TAF9_BOVIN Transcription initiation factor TFIID subunit
9 OS=Bos taurus GN=TAF9 PE=2 SV=1
Length = 264

Score = 125 bits (314), Expect = 2e-28
Identities = 57/125 (45%), Positives = 87/125 (69%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
+P+DA+++ IL+ MG+ ++EPRV+ Q L+F +RYV +L DA++YS HA K ++D +DV
Sbjct: 12 MPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDV 71

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQLVV 428
+LAIQ R SF+ PP R+ L+++AR RN P+P + G LPP++ L APNY+L
Sbjct: 72 RLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRLKS 131

Query: 429 PMKQA 443
K+A
Sbjct: 132 LQKKA 136


>sp|Q5R7P7|TAF9B_PONAB Transcription initiation factor TFIID subunit
9B OS=Pongo abelii GN=TAF9B PE=2 SV=1
Length = 251

Score = 125 bits (314), Expect = 2e-28
Identities = 56/117 (47%), Positives = 83/117 (70%)
Frame = +3

Query: 72 PRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDVK 251
PRDA ++ IL+ MG+ ++EPRV+ Q L+F +RYV +L DA++YS HA KP++D +DV+
Sbjct: 13 PRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVR 72

Query: 252 LAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQL 422
LAIQ R SF+ PP R+ L+++AR +N P+P + G LPP++ L APNY+L
Sbjct: 73 LAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>sp|Q6NZA9|TAF9B_MOUSE Transcription initiation factor TFIID subunit
9B OS=Mus musculus GN=Taf9b PE=1 SV=2
Length = 249

Score = 125 bits (314), Expect = 2e-28
Identities = 56/117 (47%), Positives = 83/117 (70%)
Frame = +3

Query: 72 PRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDVK 251
PRDA ++ IL+ MG+ ++EPRV+ Q L+F +RYV +L DA++YS HA KP++D +DV+
Sbjct: 13 PRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDADDVR 72

Query: 252 LAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQL 422
LAIQ R SF+ PP R+ L+++AR +N P+P + G LPP++ L APNY+L
Sbjct: 73 LAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>sp|Q9HBM6|TAF9B_HUMAN Transcription initiation factor TFIID subunit
9B OS=Homo sapiens GN=TAF9B PE=1 SV=1
Length = 251

Score = 125 bits (314), Expect = 2e-28
Identities = 56/117 (47%), Positives = 83/117 (70%)
Frame = +3

Query: 72 PRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDVK 251
PRDA ++ IL+ MG+ ++EPRV+ Q L+F +RYV +L DA++YS HA KP++D +DV+
Sbjct: 13 PRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVR 72

Query: 252 LAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQL 422
LAIQ R SF+ PP R+ L+++AR +N P+P + G LPP++ L APNY+L
Sbjct: 73 LAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>sp|Q62880|TAF9B_RAT Transcription initiation factor TFIID subunit
9B OS=Rattus norvegicus GN=Taf9b PE=2 SV=2
Length = 258

Score = 124 bits (312), Expect = 3e-28
Identities = 56/117 (47%), Positives = 82/117 (70%)
Frame = +3

Query: 72 PRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDVK 251
PRDA ++ IL+ MG+ +EPRV+ Q L+F +RYV +L DA++YS HA KP++D +DV+
Sbjct: 13 PRDALVMAQILKDMGITDYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDADDVR 72

Query: 252 LAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQL 422
LAIQ R SF+ PP R+ L+++AR +N P+P + G LPP++ L APNY+L
Sbjct: 73 LAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>sp|Q27272|TAF9_DROME Transcription initiation factor TFIID subunit
9 OS=Drosophila melanogaster GN=e(y)1 PE=1 SV=1
Length = 278

Score = 110 bits (276), Expect = 5e-24
Identities = 53/118 (44%), Positives = 82/118 (69%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
VP+DA+++ SIL+ + V+++EPRVV Q L+F +RYV +L DA++Y+ HA K +ID +DV
Sbjct: 18 VPKDAQVIMSILKELNVQEYEPRVVNQLLEFTFRYVTCILDDAKVYANHARKKTIDLDDV 77

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQL 422
+LA + + SF+ P R L ++A VRNSMP+P + G+ LPP++ L NY+L
Sbjct: 78 RLATEVTLDKSFTGPLERHVLAKVADVRNSMPLPPIKPHCGLRLPPDRYCLTGVNYKL 135


>sp|Q09869|TAF9_SCHPO Transcription initiation factor TFIID subunit
9 OS=Schizosaccharomyces pombe GN=taf9 PE=1 SV=1
Length = 163

Score = 96.7 bits (239), Expect = 9e-20
Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Frame = +3

Query: 72 PRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHA--SKPSIDTED 245
P+D +L+ IL S+GV + V Q L F +RY +++ D+Q+Y+EH+ I ED
Sbjct: 14 PKDVRLIHLILSSLGVPSYSQTVPLQLLTFAHRYTQQLIQDSQVYAEHSRGQNAPISVED 73

Query: 246 VKLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQLV 425
V+LA+ S++ SF+ PP +E L+ELA RN P+P++ G LPPE+ L PN+ +
Sbjct: 74 VRLAVASQINHSFTGPPPKEFLLELAMERNRKPLPQIQPSYGFRLPPEKYCLTQPNWIVS 133

Query: 426 VPMKQADEMEVDDKD 470
+Q E + D
Sbjct: 134 NETQQNQPKEENSSD 148


tr_hit_id A9NUA4
Definition tr|A9NUA4|A9NUA4_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 178
Score (bit) 216.0
E-value 1.0e-54
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951001|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_D15, 5'
(649 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NUA4|A9NUA4_PICSI Putative uncharacterized protein OS=Picea... 216 1e-54
tr|A7P6I1|A7P6I1_VITVI Chromosome chr9 scaffold_7, whole genome ... 204 4e-51
tr|Q9SYH2|Q9SYH2_ARATH F15I1.24 protein (At1g54140) (TAF9) (Tran... 195 2e-48
tr|A9PCE8|A9PCE8_POPTR Putative uncharacterized protein OS=Popul... 186 8e-46
tr|Q38M73|Q38M73_SOLTU Putative uncharacterized protein OS=Solan... 185 2e-45
tr|Q10JT5|Q10JT5_ORYSJ Transcription initiation factor IID, 31kD... 176 8e-43
tr|B6TMH7|B6TMH7_MAIZE Transcription initiation factor TFIID sub... 174 3e-42
tr|B6T3B6|B6T3B6_MAIZE Transcription initiation factor TFIID sub... 172 2e-41
tr|B4FAS0|B4FAS0_MAIZE Putative uncharacterized protein OS=Zea m... 172 2e-41
tr|A9U4J1|A9U4J1_PHYPA Predicted protein (Fragment) OS=Physcomit... 164 4e-39
tr|Q84MQ7|Q84MQ7_ORYSJ Os03g0408500 protein OS=Oryza sativa subs... 162 2e-38
tr|A3AIZ3|A3AIZ3_ORYSJ Putative uncharacterized protein OS=Oryza... 144 5e-33
tr|Q76P26|Q76P26_DICDI Similar to F55B11.3.p [Caenorhabditis ele... 131 3e-29
tr|Q55A39|Q55A39_DICDI Transcription initiation factor TFIID sub... 131 3e-29
tr|Q0P450|Q0P450_DANRE TAF9 RNA polymerase II, TATA box binding ... 126 1e-27
tr|A8E5M6|A8E5M6_DANRE TAF9 RNA polymerase II, TATA box binding ... 126 1e-27
tr|A2AP82|A2AP82_MOUSE TAF9B RNA polymerase II, TATA box binding... 125 2e-27
tr|A2AP80|A2AP80_MOUSE TAF9B RNA polymerase II, TATA box binding... 125 2e-27
tr|B2RUZ9|B2RUZ9_HUMAN TAF9B RNA polymerase II, TATA box binding... 125 2e-27
tr|B2R6H6|B2R6H6_HUMAN cDNA, FLJ92954, highly similar to Homo sa... 125 3e-27
tr|Q0PUV3|Q0PUV3_9PERO TATA binding protein associated factor 9 ... 124 5e-27
tr|Q641A8|Q641A8_XENLA LOC494643 protein OS=Xenopus laevis GN=LO... 124 6e-27
tr|B5XFH9|B5XFH9_SALSA Transcription initiation factor TFIID sub... 124 6e-27
tr|Q4SPT5|Q4SPT5_TETNG Chromosome 7 SCAF14536, whole genome shot... 123 8e-27
tr|Q05AU0|Q05AU0_XENLA E(Y)1 protein OS=Xenopus laevis GN=taf9b ... 123 8e-27
tr|A7RR68|A7RR68_NEMVE Predicted protein OS=Nematostella vectens... 123 1e-26
tr|B7QAZ8|B7QAZ8_IXOSC Transcription initiation factor TFII-D co... 122 1e-26
tr|B5X887|B5X887_SALSA Transcription initiation factor TFIID sub... 119 1e-25
tr|Q7QBM3|Q7QBM3_ANOGA AGAP003094-PA (Fragment) OS=Anopheles gam... 117 6e-25
tr|B0W3L2|B0W3L2_CULQU Transcription initiation factor TFIID sub... 116 1e-24

>tr|A9NUA4|A9NUA4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 186

Score = 216 bits (549), Expect = 1e-54
Identities = 109/178 (61%), Positives = 139/178 (78%), Gaps = 4/178 (2%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
+P DAK+VK+IL+SMGV+Q+EPRVV QFL+ C+RYVV+VL DAQLYSEHASKP+IDT+D+
Sbjct: 13 LPMDAKIVKTILKSMGVQQYEPRVVHQFLELCHRYVVDVLSDAQLYSEHASKPTIDTDDL 72

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQLVV 428
KLAIQS+V FSFSQPP RE L+ELAR RN +P+P I GPG+ALPPEQD+LI PNYQL +
Sbjct: 73 KLAIQSKVNFSFSQPPPREILLELARNRNRLPLPMSIGGPGMALPPEQDTLINPNYQLAI 132

Query: 429 PMK----QADEMEVDDKDGNKPPLPTDKNGMSSPASQQGLEQDGSKKVSFSLAGKRPR 590
P K A+EME+D+++GNK D S Q+ + +++VSFSL+ KRPR
Sbjct: 133 PKKPATQAAEEMEIDEEEGNK----GDLGNFQSLQEQKVDHEAAAQRVSFSLSAKRPR 186


>tr|A7P6I1|A7P6I1_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034077001
PE=4 SV=1
Length = 177

Score = 204 bits (519), Expect = 4e-51
Identities = 108/180 (60%), Positives = 135/180 (75%), Gaps = 6/180 (3%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
+PRDAK+VKS+L+SMGV +EPRV+ QFL+ YRYVV+VL DAQ+YSEHASKP+ID +DV
Sbjct: 8 LPRDAKIVKSLLKSMGVDDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAIDCDDV 67

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQLVV 428
KLAIQS+V FSFSQPP+RE L+ELAR RN +P+PK I+GPGI LPPEQD+LI+PNYQL +
Sbjct: 68 KLAIQSKVNFSFSQPPAREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPNYQLAI 127

Query: 429 PMK---QADEMEVDDKDGNKPPLPTDKNGMSSPASQQG---LEQDGSKKVSFSLAGKRPR 590
P K QA E +D++G P S ASQ+G L Q ++VSF + KRPR
Sbjct: 128 PKKRTAQAVEETEEDEEGADP----------SHASQEGRTDLPQHTPQRVSFPIGAKRPR 177


>tr|Q9SYH2|Q9SYH2_ARATH F15I1.24 protein (At1g54140) (TAF9)
(Transcriptional activation factor TAFII32, putative)
(Putative TATA binding protein associated factor 21kDa
subunit) OS=Arabidopsis thaliana GN=TAF9 PE=2 SV=1
Length = 183

Score = 195 bits (495), Expect = 2e-48
Identities = 102/180 (56%), Positives = 131/180 (72%), Gaps = 6/180 (3%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
VPRDAK+VKS+L+SMGV+ +EPRV+ QFL+ YRYVVEVL DAQ+YSEHASKP+ID +DV
Sbjct: 9 VPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASKPNIDCDDV 68

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQLVV 428
KLAIQS+V FSFSQPP RE L+ELA RN +P+PK I+GPG+ LPPEQD+L++PNYQLV+
Sbjct: 69 KLAIQSKVNFSFSQPPPREVLLELAASRNKIPLPKSIAGPGVPLPPEQDTLLSPNYQLVI 128

Query: 429 PMKQADEMEVDDKDGNKPPLPTDKNGMSSPASQQGLEQDGS------KKVSFSLAGKRPR 590
P K + +D + P G SS QQ +Q ++VSF L+ +RP+
Sbjct: 129 PKKSVSTEPEETEDDEEMTDP----GQSSQEQQQQQQQTSDLPSQTPQRVSFPLS-RRPK 183


>tr|A9PCE8|A9PCE8_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 175

Score = 186 bits (473), Expect = 8e-46
Identities = 98/176 (55%), Positives = 129/176 (73%), Gaps = 2/176 (1%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
+PRDAK+VKS+L+SMGV+ +EPRVV QFL+ YRYVV+VL DAQ+YSEHA+K +ID +DV
Sbjct: 8 MPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANKTAIDCDDV 67

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQLVV 428
KLAIQS+V FSFSQPP RE L+ELAR RN +P+PK I+GPGI LPPEQD+LI+PNYQL +
Sbjct: 68 KLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPNYQLAI 127

Query: 429 PMKQADEM--EVDDKDGNKPPLPTDKNGMSSPASQQGLEQDGSKKVSFSLAGKRPR 590
P K+ + E ++ + + P + + P Q ++VSF L KRP+
Sbjct: 128 PKKRTAQAIEETEEDEESADPNQSQEQKTDPP-------QLTPQRVSFPLT-KRPK 175


>tr|Q38M73|Q38M73_SOLTU Putative uncharacterized protein OS=Solanum
tuberosum PE=2 SV=1
Length = 217

Score = 185 bits (470), Expect = 2e-45
Identities = 94/169 (55%), Positives = 122/169 (72%), Gaps = 1/169 (0%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
+PRDAK+VK++L+SMGV +EPRVV QFL+ YRYVV+VL DAQ+YSEHA K SID++D+
Sbjct: 9 LPRDAKIVKTLLKSMGVDDYEPRVVHQFLELWYRYVVDVLMDAQVYSEHAGKASIDSDDI 68

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQLVV 428
KLAIQS+V FSFSQPP RE L+ELAR RN +P+PK I+G G+ LPPEQD+LI PNYQL +
Sbjct: 69 KLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGSGVPLPPEQDTLINPNYQLAI 128

Query: 429 PMKQADEMEVDDKDGNK-PPLPTDKNGMSSPASQQGLEQDGSKKVSFSL 572
KQ + E ++D + P P S + + Q ++VSF L
Sbjct: 129 AKKQTSQPEETEEDEERADPNPAPSKNPSLSHEKTDVPQGTPQQVSFPL 177


>tr|Q10JT5|Q10JT5_ORYSJ Transcription initiation factor IID, 31kD
subunit family protein, expressed OS=Oryza sativa subsp.
japonica GN=LOC_Os03g29470 PE=4 SV=1
Length = 224

Score = 176 bits (447), Expect = 8e-43
Identities = 94/174 (54%), Positives = 124/174 (71%), Gaps = 7/174 (4%)
Frame = +3

Query: 72 PRDAKLVKSILRSMGVKQ--HEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTED 245
PRDA++V+ +LRSMG+ + +EPRVV QFLD YRYV +VLGDAQ+Y++HA KP +D +D
Sbjct: 34 PRDARVVRELLRSMGLSEGEYEPRVVHQFLDLAYRYVGDVLGDAQVYADHAGKPQLDADD 93

Query: 246 VKLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPG-IALPPEQDSLIAPNYQL 422
V+LAIQS+V FSFSQPP RE L+E+AR RN +P+PK I+ PG I LPPEQD+L++ NYQL
Sbjct: 94 VRLAIQSKVNFSFSQPPPREVLLEVARNRNKIPLPKSIAPPGSIPLPPEQDTLLSQNYQL 153

Query: 423 VVPMKQADEM-EVDDKDGNKPPLPTDKNGMSSP---ASQQGLEQDGSKKVSFSL 572
+ P+K + E +D + P PT SP QQ L Q G ++VSF L
Sbjct: 154 LAPLKPPPQFEETEDDNAGANPTPTSNPSNPSPNNLQEQQQLPQHG-QRVSFQL 206


>tr|B6TMH7|B6TMH7_MAIZE Transcription initiation factor TFIID
subunit 9B OS=Zea mays PE=2 SV=1
Length = 224

Score = 174 bits (442), Expect = 3e-42
Identities = 100/192 (52%), Positives = 130/192 (67%), Gaps = 19/192 (9%)
Frame = +3

Query: 72 PRDAKLVKSILRSMGVKQ--HEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTED 245
PRDA++V+ +LRSMG+++ +EPRVV QFLD YRYV +VLGDAQ+Y++HA K ID +D
Sbjct: 25 PRDARVVRELLRSMGLREGEYEPRVVHQFLDLAYRYVGDVLGDAQVYADHAGKAQIDADD 84

Query: 246 VKLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPG-IALPPEQDSLIAPNYQL 422
V+LAIQ++V FSFSQPP RE L+ELAR RN MP+PK I+ PG I LPPEQD+L+A NYQL
Sbjct: 85 VRLAIQAKVNFSFSQPPPREVLLELARSRNRMPLPKSIAPPGSIPLPPEQDTLLAQNYQL 144

Query: 423 VVPMK---QADEMEVDDKDGNKPPLPTDKN-----GMSSPASQQGLEQDGSKKVSFSL-- 572
+ P+K Q +E+E D+ + P P + N SS QQ ++VSF L
Sbjct: 145 LPPLKPPPQYEEIE-DETEEPNPSNPANSNPSYSQDQSSKEQQQQHTPQHGQRVSFQLNA 203

Query: 573 ------AGKRPR 590
A KRPR
Sbjct: 204 VAAAAAAAKRPR 215


>tr|B6T3B6|B6T3B6_MAIZE Transcription initiation factor TFIID
subunit 9B OS=Zea mays PE=2 SV=1
Length = 225

Score = 172 bits (436), Expect = 2e-41
Identities = 99/191 (51%), Positives = 130/191 (68%), Gaps = 18/191 (9%)
Frame = +3

Query: 72 PRDAKLVKSILRSMGVKQ--HEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTED 245
PRDA++V+ +LRSMG+ + +EPRVV QFLD YRYV +VLGDAQ+Y++HA K ID +D
Sbjct: 27 PRDARVVRELLRSMGLGEGEYEPRVVHQFLDLAYRYVGDVLGDAQVYADHAGKAQIDADD 86

Query: 246 VKLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPG-IALPPEQDSLIAPNYQL 422
V+LAIQ++V FSFSQPP RE L+ELAR RN MP+PK I+ PG I LPPEQD+L+A NYQL
Sbjct: 87 VRLAIQAKVNFSFSQPPPREVLLELARSRNRMPLPKSIAPPGSIPLPPEQDTLLAQNYQL 146

Query: 423 VVPMK---QADEMEVDDKDGNKPPLPTDKNGMSSPA------SQQGLEQDGSKKVSFSL- 572
+ P+K Q +E E ++++ N P N + + QQ Q G ++VSF L
Sbjct: 147 LPPLKPPPQYEENEDENEESNPSLTPNPANSNPTXSQDQRSNEQQHTPQHG-QRVSFQLN 205

Query: 573 -----AGKRPR 590
A KRPR
Sbjct: 206 AVAAAAAKRPR 216


>tr|B4FAS0|B4FAS0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 225

Score = 172 bits (435), Expect = 2e-41
Identities = 101/193 (52%), Positives = 131/193 (67%), Gaps = 20/193 (10%)
Frame = +3

Query: 72 PRDAKLVKSILRSMGVKQ--HEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTED 245
PRDA++V+ +LRSMG+ + +EPRVV QFLD YRYV +VLGDAQ+Y++HA K ID +D
Sbjct: 27 PRDARVVRELLRSMGLGEGEYEPRVVHQFLDLAYRYVGDVLGDAQVYADHAGKAQIDADD 86

Query: 246 VKLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPG-IALPPEQDSLIAPNYQL 422
V+LAIQ++V FSFSQPP RE L+ELAR RN MP+PK I+ PG I LPPEQD+L+A NYQL
Sbjct: 87 VRLAIQAKVNFSFSQPPPREVLLELARSRNRMPLPKSIAPPGSIPLPPEQDTLLAQNYQL 146

Query: 423 VVPMK---QADEMEVDDKDGNKPPLPTDKNGMSSPA--------SQQGLEQDGSKKVSFS 569
+ P+K Q +E E ++++ N P N S+P QQ Q G ++VSF
Sbjct: 147 LPPLKPPPQYEENEDENEESNPSLTPNPAN--SNPTFSQDQRSNEQQHTPQHG-QRVSFQ 203

Query: 570 L------AGKRPR 590
L A KRPR
Sbjct: 204 LNAVAAAAAKRPR 216


>tr|A9U4J1|A9U4J1_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_53971 PE=4 SV=1
Length = 125

Score = 164 bits (415), Expect = 4e-39
Identities = 80/118 (67%), Positives = 96/118 (81%)
Frame = +3

Query: 69 VPRDAKLVKSILRSMGVKQHEPRVVQQFLDFCYRYVVEVLGDAQLYSEHASKPSIDTEDV 248
+PRDAK VK+IL SMGV + EPRV+ QFLD YRYVV+VLGDAQ Y+EHA K +ID +DV
Sbjct: 7 MPRDAKTVKTILESMGVTRFEPRVINQFLDLWYRYVVDVLGDAQTYAEHAGKAAIDCDDV 66

Query: 249 KLAIQSRVTFSFSQPPSRETLMELARVRNSMPVPKVISGPGIALPPEQDSLIAPNYQL 422
KLAIQSRV SF QPP RE L++LA+ RNS+P+PK+I GI+LPPE D+LI PNYQL
Sbjct: 67 KLAIQSRVNSSFQQPPPRELLVDLAKARNSIPLPKIIGTHGISLPPEADTLIYPNYQL 124