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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951013
Clone id TST38A01NGRL0010_E04
Library
Length 597
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_E04. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ATCGGAGGGGAAACCACAGCACTTCATCGACTCCAGGATTATTTTTGGGAAAAGGACCGC
TTACAAATCTATAAGGAGACGCGAAATGGGATGTTGGGAGCAGACTATTCCACAAAAATT
TCTCCTTGGCTTGCACTCGGTTTCATCTCTCCAAGATACATCTATGAGGAGGTCAAGCGG
TATGAGAAGGAGAGGATTTCAAACGAGTCCACATATTGGGTGCTATTTGAACTCATATGG
AGGGACTACTTCCGGTTTGTGTCTATGAAGTATGGAAATGCAATTTTCCATCTGGAGGGC
CCAAGGAGAGTGAAAGGAATTAAATGGAGCCAGAACAAAGAGTTGTTTGAATGCTGGAGA
ACTGGCACAACTGGTTATCCTATGATCGATGCCAACATGAAAGAGCTGATGGCCACAGGA
TTCATGTCAAACAGGGGACGCCAGATTGTCTGTTCATTTTTGGTAAGGGATATGGGCATT
GACTGGCGGATGGGAGCAGAGTGGTTTGAGAGCCTATTGCTAGATTATGATCCTTGTTCG
AACTATGGGAATTGGACATATGGAGCAGGTGTTGGAAATGATCCACGAGAAGATCGG
■■Homology search results ■■ -
sp_hit_id Q651U1
Definition sp|Q651U1|CRYD_ORYSJ Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica
Align length 192
Score (bit) 343.0
E-value 5.0e-94
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951013|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_E04, 5'
         (578 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q651U1|CRYD_ORYSJ Cryptochrome DASH, chloroplastic/mitochondr...   343   5e-94
sp|Q84KJ5|CRYD_ARATH Cryptochrome DASH, chloroplastic/mitochondr...   338   1e-92
sp|Q38JU2|CRYD_SOLLC Cryptochrome DASH, chloroplastic/mitochondr...   335   1e-91
sp|Q75WS4|CRYD_XENLA Cryptochrome DASH OS=Xenopus laevis GN=cry-...   287   2e-77
sp|P77967|CRYD_SYNY3 Cryptochrome DASH OS=Synechocystis sp. (str...   285   9e-77
sp|Q4KML2|CRYD_DANRE Cryptochrome DASH OS=Danio rerio GN=cry-das...   284   2e-76
sp|Q7NMD1|CRYD_GLOVI Cryptochrome DASH OS=Gloeobacter violaceus ...   266   7e-71
sp|Q7UJB1|CRYD_RHOBA Cryptochrome DASH OS=Rhodopirellula baltica...   258   2e-68
sp|Q5IFN2|CRYD_OSTTA Cryptochrome DASH, chloroplastic/mitochondr...   256   6e-68
sp|Q3IPX9|CRYD_NATPD Cryptochrome DASH OS=Natronomonas pharaonis...   240   4e-63
sp|Q9KR33|CRYD_VIBCH Cryptochrome DASH OS=Vibrio cholerae GN=cry...   195   2e-49
sp|Q87JP5|CRYD_VIBPA Cryptochrome DASH OS=Vibrio parahaemolyticu...   192   8e-49
sp|Q5QXE0|CRYD_IDILO Cryptochrome DASH OS=Idiomarina loihiensis ...   179   1e-44
sp|Q4I1Q6|CRYD_GIBZE Putative cryptochrome DASH OS=Gibberella ze...   165   2e-40
sp|Q7SI68|CRYD_NEUCR Putative cryptochrome DASH, mitochondrial O...   154   2e-37
sp|Q04449|PHR_BACPF Deoxyribodipyrimidine photo-lyase (Fragment)...   127   4e-29
sp|P25078|PHR_SALTY Deoxyribodipyrimidine photo-lyase OS=Salmone...   122   2e-27
sp|Q89AJ9|PHR_BUCBP Deoxyribodipyrimidine photo-lyase OS=Buchner...   111   2e-24
sp|P27526|PHR_NEUCR Deoxyribodipyrimidine photo-lyase OS=Neurosp...   110   4e-24
sp|Q9KNA8|PHR_VIBCH Deoxyribodipyrimidine photo-lyase OS=Vibrio ...   109   9e-24
sp|P00914|PHR_ECOLI Deoxyribodipyrimidine photo-lyase OS=Escheri...   109   9e-24
sp|Q55081|PHR_SYNY3 Deoxyribodipyrimidine photo-lyase OS=Synecho...   107   6e-23
sp|P05066|PHR_YEAST Deoxyribodipyrimidine photo-lyase, mitochond...   105   1e-22
sp|Q9HQ46|PHR_HALSA Deoxyribodipyrimidine photo-lyase OS=Halobac...   104   4e-22
sp|P61497|PHR_THET8 Deoxyribodipyrimidine photo-lyase OS=Thermus...   102   1e-21
sp|P61496|PHR_THET2 Deoxyribodipyrimidine photo-lyase OS=Thermus...   102   1e-21
sp|P12768|PHR_STRGR Deoxyribodipyrimidine photo-lyase OS=Strepto...   101   3e-21
sp|P57386|PHR_BUCAI Deoxyribodipyrimidine photo-lyase OS=Buchner...    98   3e-20
sp|P05327|PHR_SYNP6 Deoxyribodipyrimidine photo-lyase OS=Synecho...    96   2e-19
sp|Q43125|CRY1_ARATH Cryptochrome-1 OS=Arabidopsis thaliana GN=C...    91   4e-18

>sp|Q651U1|CRYD_ORYSJ Cryptochrome DASH, chloroplastic/mitochondrial
           OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1
          Length = 582

 Score =  343 bits (879), Expect = 5e-94
 Identities = 156/192 (81%), Positives = 174/192 (90%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L R+ +YFW+KD+L++YKETRNGMLG DYSTK SPWLA G +SPRYI EEVKRYEK+RI+
Sbjct: 318 LGRVHEYFWKKDQLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRYICEEVKRYEKQRIA 377

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYWVLFELIWRDYFRF+S KYGN+IFHL GPR V+  KWSQ++ LFE WR G TGYP
Sbjct: 378 NDSTYWVLFELIWRDYFRFISAKYGNSIFHLGGPRNVES-KWSQDQALFESWRDGRTGYP 436

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           +IDANMKEL+ATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFE+ LLDYDP SNYGNWTY
Sbjct: 437 LIDANMKELLATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTY 496

Query: 543 GAGVGNDPREDR 578
           GAGVGNDPREDR
Sbjct: 497 GAGVGNDPREDR 508


>sp|Q84KJ5|CRYD_ARATH Cryptochrome DASH, chloroplastic/mitochondrial
           OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2
          Length = 569

 Score =  338 bits (867), Expect = 1e-92
 Identities = 152/190 (80%), Positives = 172/190 (90%)
 Frame = +3

Query: 9   RLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERISNE 188
           R+ +YFW+KD L++YKETRNGMLG DYSTK SPWLA G ISPR+IYEEV+RYEKER++N 
Sbjct: 302 RVFEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLAFGCISPRFIYEEVQRYEKERVANN 361

Query: 189 STYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYPMI 368
           STYWVLFELIWRDYFRF+S+K GN++FHL GPR V+G KWSQ+++LFE WR   TGYP+I
Sbjct: 362 STYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQG-KWSQDQKLFESWRDAKTGYPLI 420

Query: 369 DANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTYGA 548
           DANMKEL  TGFMSNRGRQIVCSFLVRDMG+DWRMGAEWFE+ LLDYDPCSNYGNWTYGA
Sbjct: 421 DANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGA 480

Query: 549 GVGNDPREDR 578
           GVGNDPREDR
Sbjct: 481 GVGNDPREDR 490


>sp|Q38JU2|CRYD_SOLLC Cryptochrome DASH, chloroplastic/mitochondrial
           OS=Solanum lycopersicum GN=CRYD PE=3 SV=2
          Length = 577

 Score =  335 bits (858), Expect = 1e-91
 Identities = 151/192 (78%), Positives = 171/192 (89%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L R+ DYFW+KD L++YKETRNGMLGADYSTK SPWLA G +SPR+IYEEVKRYEKER+S
Sbjct: 308 LGRVHDYFWKKDLLKVYKETRNGMLGADYSTKFSPWLASGSLSPRFIYEEVKRYEKERLS 367

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYWVLFELIWRDYFRF+S+K  N +F   GP++V  I WSQ++ +F+ WR G TGYP
Sbjct: 368 NDSTYWVLFELIWRDYFRFLSIKLANLLFQAGGPQKVN-INWSQDQTMFDAWRRGQTGYP 426

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           +IDANMKEL ATG+MSNRGRQIVCSFLVRDMGIDWRMGAEWFE+ LLDYDPCSNYGNWTY
Sbjct: 427 LIDANMKELAATGYMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTY 486

Query: 543 GAGVGNDPREDR 578
           GAGVGNDPREDR
Sbjct: 487 GAGVGNDPREDR 498


>sp|Q75WS4|CRYD_XENLA Cryptochrome DASH OS=Xenopus laevis
           GN=cry-dash PE=2 SV=1
          Length = 523

 Score =  287 bits (735), Expect = 2e-77
 Identities = 126/192 (65%), Positives = 156/192 (81%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L RL+ YFWE + +  YK+TRNG++G DYSTK +PWLALG +SPRYIYE++ +YEKER +
Sbjct: 224 LQRLEHYFWETNLVASYKDTRNGLIGLDYSTKFAPWLALGCVSPRYIYEQIGKYEKERTA 283

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYWV+FEL+WRDYFRFV++KYG  IF L G +  K I W ++ +LF+ W+ G TG P
Sbjct: 284 NQSTYWVIFELLWRDYFRFVALKYGRRIFFLRGLQD-KDIPWKRDPKLFDAWKEGRTGVP 342

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
            +DANM+EL  TGFMSNRGRQ V SFL +D+GIDWRMGAEWFE LL+DYD CSNYGNW Y
Sbjct: 343 FVDANMRELAMTGFMSNRGRQNVASFLTKDLGIDWRMGAEWFEYLLVDYDVCSNYGNWLY 402

Query: 543 GAGVGNDPREDR 578
            AG+GNDPRE+R
Sbjct: 403 SAGIGNDPRENR 414


>sp|P77967|CRYD_SYNY3 Cryptochrome DASH OS=Synechocystis sp. (strain
           PCC 6803) GN=cry PE=1 SV=2
          Length = 489

 Score =  285 bits (730), Expect = 9e-77
 Identities = 127/192 (66%), Positives = 158/192 (82%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L RLQDYFW  DRL+ YKETRNGM+GADYS+K SPWLALG +SPR+IY+EVKRYE+ER+S
Sbjct: 220 LARLQDYFWHGDRLKDYKETRNGMVGADYSSKFSPWLALGCLSPRFIYQEVKRYEQERVS 279

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+ST+W++FEL+WRD+FRFV+ KYGN +F+  G    K   W +++  FE WR+G TGYP
Sbjct: 280 NDSTHWLIFELLWRDFFRFVAQKYGNKLFN-RGGLLNKNFPWQEDQVRFELWRSGQTGYP 338

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           ++DANM+EL  TGFMSNRGRQ V SFL +++GIDWR GAEWFES L+DYD CSN+GNW Y
Sbjct: 339 LVDANMRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNY 398

Query: 543 GAGVGNDPREDR 578
            AG+GND R+ R
Sbjct: 399 TAGIGNDARDFR 410


>sp|Q4KML2|CRYD_DANRE Cryptochrome DASH OS=Danio rerio GN=cry-dash
           PE=2 SV=2
          Length = 520

 Score =  284 bits (727), Expect = 2e-76
 Identities = 122/192 (63%), Positives = 158/192 (82%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L RL+ YFW+ + +  YKETRNGM+G D+STK SPWLALG ISPRYIYE++K+YE ER +
Sbjct: 223 LARLKHYFWDTNAVATYKETRNGMIGVDFSTKFSPWLALGCISPRYIYEQIKKYEVERTA 282

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYWV+FEL+WRDYF+FV++KYGN IF++ G  + K + W+ + ++F+ W+ G TG P
Sbjct: 283 NQSTYWVIFELLWRDYFKFVALKYGNRIFYMNG-LQDKHVPWNTDMKMFDAWKEGRTGVP 341

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
            +DANM+EL  TGFMSNRGRQ V SFL +D+G+DWR+GAEWFE LL+D+D CSNYGNW Y
Sbjct: 342 FVDANMRELALTGFMSNRGRQNVASFLTKDLGLDWRLGAEWFEYLLVDHDVCSNYGNWLY 401

Query: 543 GAGVGNDPREDR 578
            AG+GNDPRE+R
Sbjct: 402 SAGIGNDPRENR 413


>sp|Q7NMD1|CRYD_GLOVI Cryptochrome DASH OS=Gloeobacter violaceus
           GN=cry PE=3 SV=1
          Length = 500

 Score =  266 bits (679), Expect = 7e-71
 Identities = 119/189 (62%), Positives = 152/189 (80%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L RL++YFW+K  L+ YK+TRNGMLGADYS+K S WLALG +S RYI+E+V+ YE +RI 
Sbjct: 218 LARLEEYFWQKSLLKSYKQTRNGMLGADYSSKFSAWLALGCLSARYIHEQVQTYETKRIK 277

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYW++FEL+WRDYFRF++ K+G+ +F+  G R +  I W ++ E FE WRTG TG+P
Sbjct: 278 NDSTYWLIFELLWRDYFRFIAAKHGDRLFYTAGLRGLD-IPWKEDWERFELWRTGQTGFP 336

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           ++DANM+EL ATGFMSNRGRQ V SFL +++GI W MGAEWFES L+DYD  SN+GNW Y
Sbjct: 337 LVDANMRELAATGFMSNRGRQNVASFLTKNLGIHWHMGAEWFESRLIDYDVASNWGNWNY 396

Query: 543 GAGVGNDPR 569
            AGVGND R
Sbjct: 397 TAGVGNDAR 405


>sp|Q7UJB1|CRYD_RHOBA Cryptochrome DASH OS=Rhodopirellula baltica
           GN=cry PE=3 SV=2
          Length = 488

 Score =  258 bits (658), Expect = 2e-68
 Identities = 113/187 (60%), Positives = 146/187 (78%)
 Frame = +3

Query: 9   RLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERISNE 188
           R+++Y W +DRL++YKETRNGML  + S+K SPWLA G +SPR I + V+RYE+ER+ N+
Sbjct: 219 RMEEYIWNEDRLRVYKETRNGMLHPNDSSKFSPWLAQGCLSPRMIADHVRRYEEERVKNK 278

Query: 189 STYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYPMI 368
           STYW++FEL+WRDYFR++S K+G  +F   G R V  + W  ++ELF  W+ GTTGYP++
Sbjct: 279 STYWMIFELLWRDYFRWISRKHGATLFRAGGLRGVN-VDWKSDRELFRRWQDGTTGYPLV 337

Query: 369 DANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTYGA 548
           DANM+EL  TG+MSNRGRQ V SFL +++GIDWR GA WFES L+DYD  SNYGNW Y A
Sbjct: 338 DANMRELRTTGYMSNRGRQNVASFLTKNLGIDWRWGARWFESQLVDYDVASNYGNWNYAA 397

Query: 549 GVGNDPR 569
           GVGND R
Sbjct: 398 GVGNDAR 404


>sp|Q5IFN2|CRYD_OSTTA Cryptochrome DASH, chloroplastic/mitochondrial
           OS=Ostreococcus tauri GN=Ot01g06320 PE=3 SV=1
          Length = 546

 Score =  256 bits (654), Expect = 6e-68
 Identities = 113/184 (61%), Positives = 145/184 (78%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L R++ Y WE DRL  Y ETRNGMLG DYSTK++PWLALG +SPR++  E++RYE ER+ 
Sbjct: 251 LARVKYYLWESDRLATYFETRNGMLGGDYSTKLAPWLALGCVSPRHVVSEIRRYESERVE 310

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYWV+FELIWRD+F+F ++K+GN IFHL+G    +   W +++++ + W+TGTTGYP
Sbjct: 311 NKSTYWVIFELIWRDFFKFFALKHGNKIFHLDGTAG-RRASWKRDEKILKAWKTGTTGYP 369

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           +IDANM+EL ATGFMSNRGRQ V S+L  D GIDWR GA+WFE  LLDYD  SN+GNW  
Sbjct: 370 LIDANMRELAATGFMSNRGRQNVASWLALDAGIDWRHGADWFEHHLLDYDTASNWGNWCA 429

Query: 543 GAGV 554
            AG+
Sbjct: 430 AAGM 433


>sp|Q3IPX9|CRYD_NATPD Cryptochrome DASH OS=Natronomonas pharaonis
           (strain DSM 2160 / ATCC 35678) GN=cry PE=3 SV=1
          Length = 474

 Score =  240 bits (612), Expect = 4e-63
 Identities = 110/188 (58%), Positives = 139/188 (73%)
 Frame = +3

Query: 9   RLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERISNE 188
           R++ Y WE D L+ YK TRNG+LGADYS+K SPWLA G +SPR+++ EV+RYE ER++NE
Sbjct: 218 RVESYIWEGDHLREYKTTRNGLLGADYSSKFSPWLAAGCLSPRWLHREVERYEDERVANE 277

Query: 189 STYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYPMI 368
            TYW++FEL WRD+F+F   KYG A F   G  R + I W +++ LFE W  G TG P +
Sbjct: 278 DTYWLVFELAWRDFFQFQFEKYG-ATFFKPGGIRERNIDWDRDRALFERWADGETGVPFV 336

Query: 369 DANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTYGA 548
           DANM+EL  TG+MSNRGRQ V SFL   +GIDWR GA +FE+ L+DYD  SN+GNW Y A
Sbjct: 337 DANMRELNRTGYMSNRGRQNVASFLAGVLGIDWRWGAAYFEARLIDYDVASNWGNWAYQA 396

Query: 549 GVGNDPRE 572
           GVGND R+
Sbjct: 397 GVGNDSRD 404
tr_hit_id A9U403
Definition tr|A9U403|A9U403_PHYPA Photolyase-like protein OS=Physcomitrella patens subsp. patens
Align length 192
Score (bit) 353.0
E-value 5.0e-96
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951013|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_E04, 5'
         (578 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U403|A9U403_PHYPA Photolyase-like protein OS=Physcomitrella...   353   5e-96
tr|Q0DAD1|Q0DAD1_ORYSJ Os06g0661800 protein OS=Oryza sativa subs...   343   5e-93
tr|A3BEA9|A3BEA9_ORYSJ Putative uncharacterized protein OS=Oryza...   343   5e-93
tr|B8B106|B8B106_ORYSI Putative uncharacterized protein OS=Oryza...   341   1e-92
tr|B8A343|B8A343_MAIZE Putative uncharacterized protein OS=Zea m...   333   3e-90
tr|A7P504|A7P504_VITVI Chromosome chr4 scaffold_6, whole genome ...   323   3e-87
tr|A5C9X1|A5C9X1_VITVI Putative uncharacterized protein OS=Vitis...   323   3e-87
tr|A0YNC9|A0YNC9_9CYAN Probable bacterial cryptochrome OS=Lyngby...   285   1e-75
tr|B4WS74|B4WS74_9SYNE Cryptochrome, DASH family OS=Synechococcu...   285   2e-75
tr|Q10W56|Q10W56_TRIEI Deoxyribodipyrimidine photo-lyase type I ...   282   8e-75
tr|Q4BVE9|Q4BVE9_CROWT Deoxyribodipyrimidine photolyase OS=Croco...   280   3e-74
tr|A3ISS7|A3ISS7_9CHRO Probable bacterial cryptochrome OS=Cyanot...   280   5e-74
tr|B4BVE7|B4BVE7_9CHRO Cryptochrome, DASH family OS=Cyanothece s...   279   7e-74
tr|B7JXM8|B7JXM8_SYNP8 Cryptochrome, DASH family OS=Synechococcu...   278   2e-73
tr|B1WSS8|B1WSS8_CYAA5 DNA photolyase OS=Cyanothece (strain ATCC...   275   1e-72
tr|B4AXR0|B4AXR0_9CHRO Cryptochrome, DASH family OS=Cyanothece s...   275   2e-72
tr|B0C445|B0C445_ACAM1 Deoxyribodipyrimidine photolyase OS=Acary...   274   2e-72
tr|B4VS67|B4VS67_9CYAN Cryptochrome, DASH family OS=Microcoleus ...   274   2e-72
tr|B1XLX0|B1XLX0_SYNP2 DNA photolyase OS=Synechococcus sp. (stra...   273   4e-72
tr|B7KBY8|B7KBY8_9CHRO Cryptochrome, DASH family OS=Cyanothece s...   270   3e-71
tr|B5W072|B5W072_SPIMA Cryptochrome, DASH family OS=Arthrospira ...   270   6e-71
tr|Q2JN91|Q2JN91_SYNJB Deoxyribodipyrimidine photolyase OS=Synec...   268   2e-70
tr|A7SYS9|A7SYS9_NEMVE Predicted protein OS=Nematostella vectens...   268   2e-70
tr|A9UXR7|A9UXR7_MONBE Predicted protein OS=Monosiga brevicollis...   267   3e-70
tr|A8YIF1|A8YIF1_MICAE Similar to tr|Q4BVE9|Q4BVE9_CROWT Deoxyri...   264   2e-69
tr|Q2JXG1|Q2JXG1_SYNJA Deoxyribodipyrimidine photolyase OS=Synec...   261   2e-68
tr|B0JLU3|B0JLU3_MICAN Deoxyribodipyrimidine photolyase OS=Micro...   259   1e-67
tr|A4RS79|A4RS79_OSTLU Predicted protein OS=Ostreococcus lucimar...   252   1e-65
tr|A8IAH1|A8IAH1_CHLRE Cryptochrome DASH1 (Fragment) OS=Chlamydo...   237   4e-61
tr|A1ZPZ8|A1ZPZ8_9SPHI Deoxyribodipyrimidine photolyase OS=Micro...   236   7e-61

>tr|A9U403|A9U403_PHYPA Photolyase-like protein OS=Physcomitrella
           patens subsp. patens GN=Cry3 PE=4 SV=1
          Length = 557

 Score =  353 bits (905), Expect = 5e-96
 Identities = 159/192 (82%), Positives = 176/192 (91%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L RLQDYFW KD+L+IYKETRNGMLGA+YSTK SPWLA G +SPR I++EVKRYE ER++
Sbjct: 291 LARLQDYFWNKDQLKIYKETRNGMLGANYSTKFSPWLAHGCLSPRTIHDEVKRYETERVA 350

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYWVLFELIWRDYFRFVS+KYGNAIFHL GPR+V G +WSQN+ELFE WR G TGYP
Sbjct: 351 NDSTYWVLFELIWRDYFRFVSIKYGNAIFHLGGPRKVVGKRWSQNRELFEAWREGRTGYP 410

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           +IDANMKEL ATGFMSNRGRQIVCSFLVRD+G+DWRMG EWFE+ LLDYDPCSNYGNWTY
Sbjct: 411 LIDANMKELAATGFMSNRGRQIVCSFLVRDLGLDWRMGGEWFETCLLDYDPCSNYGNWTY 470

Query: 543 GAGVGNDPREDR 578
           GAGVGNDPREDR
Sbjct: 471 GAGVGNDPREDR 482


>tr|Q0DAD1|Q0DAD1_ORYSJ Os06g0661800 protein OS=Oryza sativa subsp.
           japonica GN=Os06g0661800 PE=4 SV=1
          Length = 547

 Score =  343 bits (879), Expect = 5e-93
 Identities = 156/192 (81%), Positives = 174/192 (90%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L R+ +YFW+KD+L++YKETRNGMLG DYSTK SPWLA G +SPRYI EEVKRYEK+RI+
Sbjct: 283 LGRVHEYFWKKDQLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRYICEEVKRYEKQRIA 342

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYWVLFELIWRDYFRF+S KYGN+IFHL GPR V+  KWSQ++ LFE WR G TGYP
Sbjct: 343 NDSTYWVLFELIWRDYFRFISAKYGNSIFHLGGPRNVES-KWSQDQALFESWRDGRTGYP 401

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           +IDANMKEL+ATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFE+ LLDYDP SNYGNWTY
Sbjct: 402 LIDANMKELLATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTY 461

Query: 543 GAGVGNDPREDR 578
           GAGVGNDPREDR
Sbjct: 462 GAGVGNDPREDR 473


>tr|A3BEA9|A3BEA9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_021381 PE=4 SV=1
          Length = 582

 Score =  343 bits (879), Expect = 5e-93
 Identities = 156/192 (81%), Positives = 174/192 (90%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L R+ +YFW+KD+L++YKETRNGMLG DYSTK SPWLA G +SPRYI EEVKRYEK+RI+
Sbjct: 318 LGRVHEYFWKKDQLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRYICEEVKRYEKQRIA 377

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYWVLFELIWRDYFRF+S KYGN+IFHL GPR V+  KWSQ++ LFE WR G TGYP
Sbjct: 378 NDSTYWVLFELIWRDYFRFISAKYGNSIFHLGGPRNVES-KWSQDQALFESWRDGRTGYP 436

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           +IDANMKEL+ATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFE+ LLDYDP SNYGNWTY
Sbjct: 437 LIDANMKELLATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTY 496

Query: 543 GAGVGNDPREDR 578
           GAGVGNDPREDR
Sbjct: 497 GAGVGNDPREDR 508


>tr|B8B106|B8B106_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_24002 PE=4 SV=1
          Length = 547

 Score =  341 bits (875), Expect = 1e-92
 Identities = 155/192 (80%), Positives = 174/192 (90%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L R+ +YFW+KD+L++YK+TRNGMLG DYSTK SPWLA G +SPRYI EEVKRYEK+RI+
Sbjct: 283 LGRVHEYFWKKDQLKVYKKTRNGMLGPDYSTKFSPWLASGSLSPRYICEEVKRYEKQRIA 342

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYWVLFELIWRDYFRF+S KYGN+IFHL GPR V+  KWSQ++ LFE WR G TGYP
Sbjct: 343 NDSTYWVLFELIWRDYFRFISAKYGNSIFHLGGPRNVES-KWSQDQALFESWRDGRTGYP 401

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           +IDANMKEL+ATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFE+ LLDYDP SNYGNWTY
Sbjct: 402 LIDANMKELLATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTY 461

Query: 543 GAGVGNDPREDR 578
           GAGVGNDPREDR
Sbjct: 462 GAGVGNDPREDR 473


>tr|B8A343|B8A343_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 550

 Score =  333 bits (855), Expect = 3e-90
 Identities = 152/192 (79%), Positives = 171/192 (89%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L R+ +YFW+KD+L+ YK TRNGMLG DYSTK SPWLA G +SPRYI EEVKRYEK+R++
Sbjct: 285 LGRVHEYFWKKDQLKDYKVTRNGMLGPDYSTKFSPWLASGSLSPRYICEEVKRYEKQRVA 344

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYWVLFELIWRDYFRF+S KYGNAIFHL GPR+V   KWSQ++ LFE WR G TGYP
Sbjct: 345 NDSTYWVLFELIWRDYFRFLSAKYGNAIFHLGGPRKVVS-KWSQDQALFESWRDGRTGYP 403

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           +IDANM+EL ATG+MSNRGRQIVCSFLVRDMG+DWRMGAEWFE+ LLDYDP SNYGNWTY
Sbjct: 404 LIDANMRELSATGYMSNRGRQIVCSFLVRDMGVDWRMGAEWFETCLLDYDPASNYGNWTY 463

Query: 543 GAGVGNDPREDR 578
           GAGVGNDPREDR
Sbjct: 464 GAGVGNDPREDR 475


>tr|A7P504|A7P504_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032351001
           PE=4 SV=1
          Length = 564

 Score =  323 bits (829), Expect = 3e-87
 Identities = 146/182 (80%), Positives = 166/182 (91%)
 Frame = +3

Query: 33  KDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERISNESTYWVLFE 212
           +D L++YK TRNGMLGADYSTK SPWLA G +SPR+IY+EVKRYEKER +N+STYWVLFE
Sbjct: 306 RDLLKVYKATRNGMLGADYSTKFSPWLASGSLSPRFIYQEVKRYEKERQANDSTYWVLFE 365

Query: 213 LIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYPMIDANMKELM 392
           LIWRDYFRF+S+KY N++FHL GPR+V+  +WSQ++ +FE WR G TGYP+IDANMKEL 
Sbjct: 366 LIWRDYFRFLSVKYRNSLFHLGGPRKVEA-RWSQDQTMFEAWRDGCTGYPLIDANMKELS 424

Query: 393 ATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTYGAGVGNDPRE 572
           ATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFE+ LLDYDPCSNYGNWTYGAGVGNDPRE
Sbjct: 425 ATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRE 484

Query: 573 DR 578
           DR
Sbjct: 485 DR 486


>tr|A5C9X1|A5C9X1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_014519 PE=4 SV=1
          Length = 584

 Score =  323 bits (829), Expect = 3e-87
 Identities = 146/182 (80%), Positives = 166/182 (91%)
 Frame = +3

Query: 33  KDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERISNESTYWVLFE 212
           +D L++YK TRNGMLGADYSTK SPWLA G +SPR+IY+EVKRYEKER +N+STYWVLFE
Sbjct: 326 RDLLKVYKATRNGMLGADYSTKFSPWLASGSLSPRFIYQEVKRYEKERQANDSTYWVLFE 385

Query: 213 LIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYPMIDANMKELM 392
           LIWRDYFRF+S+KY N++FHL GPR+V+  +WSQ++ +FE WR G TGYP+IDANMKEL 
Sbjct: 386 LIWRDYFRFLSVKYRNSLFHLGGPRKVEA-RWSQDQTMFEAWRDGCTGYPLIDANMKELS 444

Query: 393 ATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTYGAGVGNDPRE 572
           ATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFE+ LLDYDPCSNYGNWTYGAGVGNDPRE
Sbjct: 445 ATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRE 504

Query: 573 DR 578
           DR
Sbjct: 505 DR 506


>tr|A0YNC9|A0YNC9_9CYAN Probable bacterial cryptochrome OS=Lyngbya
           sp. PCC 8106 GN=L8106_00820 PE=3 SV=1
          Length = 515

 Score =  285 bits (729), Expect = 1e-75
 Identities = 125/189 (66%), Positives = 159/189 (84%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           + RL DY WE+D L+ YK+TRNGMLGA+YS+K SPWLALG +SPR+IY+ V+ YE++R+ 
Sbjct: 240 ISRLTDYIWEQDCLKDYKQTRNGMLGANYSSKFSPWLALGCLSPRFIYDHVQDYEEQRVK 299

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N+STYW++FEL+WRDYFRF+ +K+GN IF L G + V  I W ++ E FECWRTGTTG+P
Sbjct: 300 NDSTYWLVFELLWRDYFRFICLKHGNKIFRLSGLQGVS-IPWKEDWERFECWRTGTTGFP 358

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           ++DANM+EL ATGFMSNRGRQ V SFL +++GI+W+MGAEWFESLL+DYD CSN+GNW Y
Sbjct: 359 LVDANMRELAATGFMSNRGRQNVASFLTKNLGINWKMGAEWFESLLVDYDVCSNWGNWNY 418

Query: 543 GAGVGNDPR 569
            AGVGND R
Sbjct: 419 TAGVGNDAR 427


>tr|B4WS74|B4WS74_9SYNE Cryptochrome, DASH family OS=Synechococcus
           sp. PCC 7335 GN=S7335_4589 PE=4 SV=1
          Length = 490

 Score =  285 bits (728), Expect = 2e-75
 Identities = 132/189 (69%), Positives = 153/189 (80%)
 Frame = +3

Query: 3   LHRLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERIS 182
           L RLQ YFW  DRLQ YKETRNGMLGADYS+K SPWLA G +SPR +YEEV+RYE+ER  
Sbjct: 216 LDRLQHYFWNADRLQRYKETRNGMLGADYSSKFSPWLANGSLSPRRVYEEVQRYERERKK 275

Query: 183 NESTYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYP 362
           N STYW++FEL+WRDYFRFV +KYG  IF   G R +  I+W Q+ + F+ WR G TGYP
Sbjct: 276 NNSTYWMIFELMWRDYFRFVCVKYGRKIFRKGGIRGLP-IEWQQDWKRFDLWREGKTGYP 334

Query: 363 MIDANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTY 542
           +IDANM+EL ATGFMSNRGRQ V SFL +++GIDWRMGAEWFESLL+DYD CSN+GNW Y
Sbjct: 335 LIDANMRELAATGFMSNRGRQNVASFLTKNLGIDWRMGAEWFESLLIDYDVCSNWGNWNY 394

Query: 543 GAGVGNDPR 569
            AGVGND R
Sbjct: 395 TAGVGNDAR 403


>tr|Q10W56|Q10W56_TRIEI Deoxyribodipyrimidine photo-lyase type I
           OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_4538
           PE=3 SV=1
          Length = 498

 Score =  282 bits (722), Expect = 8e-75
 Identities = 123/187 (65%), Positives = 157/187 (83%)
 Frame = +3

Query: 9   RLQDYFWEKDRLQIYKETRNGMLGADYSTKISPWLALGFISPRYIYEEVKRYEKERISNE 188
           R+++YFW++D L++YKETRNGMLGA+YS+K SPWLALG +SPRYIYEEVK YE +R+ N+
Sbjct: 220 RVKNYFWQQDYLKVYKETRNGMLGANYSSKFSPWLALGCLSPRYIYEEVKEYEYQRVKNQ 279

Query: 189 STYWVLFELIWRDYFRFVSMKYGNAIFHLEGPRRVKGIKWSQNKELFECWRTGTTGYPMI 368
           STYW++FELIWRDYFRF+  K+GN IFH  G + +  I W ++ E F  W+ G TG+P++
Sbjct: 280 STYWLIFELIWRDYFRFICQKHGNKIFHKSGLQGI-AIPWQEDWEKFRKWQAGQTGFPLV 338

Query: 369 DANMKELMATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFESLLLDYDPCSNYGNWTYGA 548
           DANM+EL+ATGFMSNRGRQ V SFL +++GI+W+MGAEWFESLL+DYD CSN+GNW Y A
Sbjct: 339 DANMRELLATGFMSNRGRQNVASFLTKNLGINWQMGAEWFESLLIDYDVCSNWGNWNYTA 398

Query: 549 GVGNDPR 569
           GVGND R
Sbjct: 399 GVGNDGR 405