DK951022 [AcEST]

DK951022
Clone id	TST38A01NGRL0010_E13
Library	TST38
Length	669
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_E13. 5' end sequence.
Accession	DK951022
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL34Contig1
Sequence	CATTTGTCAGCACGCTGCTTTGTCTTCGCGCAGCCACAGCTGCCGCTTCTGGCTCGTCGT TGCCGGCTGCATCACCTCGCATCCGTCTGTAGCGTGGACTCGCGTGGTGGCGCACACGCA GCGGCAGCTCCTCCACTGCAGCTCTCGACAGCGAGAAGGCTCAATCGCGTGAATCAGCAC GGTGGGCTATTCGACTCGATCACCCAACCATCGCACGTGCAGAGGCTAGGGCCTCTTCTT CCTCCTCCTCCCTCTGCGGCTTCTCACCTCCGAAGCCACATTTTGGCAATGGCAGCTCGA AGTGCTTGCCAGAGCTCTTCCCTCTTGAATTCCCTCACCCAGCTACCTTGCGTTCCTTTC CCTACATCCTCCACCAACGTGAGCTTTGGTAGTTCCTGCCGTGCAAACCACCTCCCGCTT CATGTCACTGCATCAGCATCGGATAGCCGCAAGGCAATGAAAGTTGATGGAACGGTCTTT ACGGTCAGAACAGTGCTTAACATTAATCCCGTGGCCAAGCACGGGGCTCCATCAAGCGTA CCTGCTGCTGCTCCCATTTCTGTGGTGGCCACGGAAGTGGAGACTTTACCCTTGGATAGG TTGAAGACTGGCTATCTCANATTCAAGGAAAACTACATAAAAAATCAAGCACTTGTGAAG TCGCTGGCA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK951022\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_E13, 5' (669 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A5CUP1
Definition	tr\|A5CUP1\|A5CUP1_CLAM3 Conserved hypothetical protein OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Align length	88
Score (bit)	33.9
E-value	9.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK951022\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_E13, 5' (669 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A5CUP1\|A5CUP1_CLAM3 Conserved hypothetical protein OS=Claviba... 34 9.4 >tr\|A5CUP1\|A5CUP1_CLAM3 Conserved hypothetical protein OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=CMM_2744 PE=4 SV=1 Length = 237 Score = 33.9 bits (76), Expect = 9.4 Identities = 24/88 (27%), Positives = 36/88 (40%) Frame = -2 Query: 542 GTLDGAPCLATGLMLSTVLTVKTVPSTFIALRLSDADAVT*SGRWFARQELPKLTLVEDV 363 G + P + GL L V +SDA ++ R ARQ L + L +V Sbjct: 113 GAVFAFPLVVAGLSLGAVDLYSRTARDISTQEVSDATTLS---RIVARQVLRRALLAAEV 169 Query: 362 GKGTQGSWVREFKREELWQALRAAIAKM 279 + G W + R E+ QA +A+M Sbjct: 170 RQEETGGWEGRYSRREVHQATGMVVAQM 197