DK951036
Clone id TST38A01NGRL0010_F03
Library
Length 678
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_F03. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
TGACAGCTAGTGCTGCTACAGCACCTGCTGCCCCACTGTTACTCGAAACACCAAGCGGGC
AATTTCTAGCGGAGTTGTTGCAAAGTCATCCTTACCTTGTGTGTGCAGCAGCAGAGCAGC
AGCTCGAAACGTTAGCGGAGGCTAGAGACGCAGCAGCCACAAGTCAAGAGCAATCGAGTC
CCATGGGCACTGAGATGATTCTTTACAAACGTATAGCAGAGCTTAAAGCACAGGAAAGGT
GCAAGGCATTAGAGGATATTATGTATGCTCTCATTTGCGAAAAGTTTGTGGAGGCTGGGA
TATCCTTTGTTCCACAAATATCAAAGAGCTCTAAGAATCAAAGAGTCGACACTTGGCTTC
CACAAGACGACGAGTTGGAATCAGTACACTCATTTGCAGCCCTTGAACTGATTCGTGAGC
ATTTGAATCTTGTTTTGGGTGGAAGAGGTAGCGCAGATACCACCGACCAAAAGTCGACAG
CCCAAATTAGCAAGCTACGCATGGGTCGTGCCTATGCGGCTTCTGCAGTCTATGGCTATT
TCATCAGAAGGGTTGATAAGCGGTTTCAGCTCGAGAAGACCATAGCAAATTCTACAGCTC
AGCTTATTGAGATGGAGCGCACACACATGTCAGAACGAGGGAATGCAGATCACAATGACG
ATGTATGTGAGTCTGAAA
■■Homology search results ■■ -
sp_hit_id Q64449
Definition sp|Q64449|MRC2_MOUSE C-type mannose receptor 2 OS=Mus musculus
Align length 48
Score (bit) 30.4
E-value 9.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951036|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_F03, 5'
(678 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q64449|MRC2_MOUSE C-type mannose receptor 2 OS=Mus musculus G... 30 9.0

>sp|Q64449|MRC2_MOUSE C-type mannose receptor 2 OS=Mus musculus
GN=Mrc2 PE=1 SV=2
Length = 1479

Score = 30.4 bits (67), Expect = 9.0
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3

Query: 282 KFVEAGISFVPQISKSSKNQRVDTWLPQDDELESVHSFAALELIREHL 425
+F EA F S ++ QR+ TW D L SVHS A L+ + ++L
Sbjct: 830 RFQEAEYKFFEHHSSWAQAQRICTWFQAD--LTSVHSQAELDFLGQNL 875


tr_hit_id A7QTZ7
Definition tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera
Align length 178
Score (bit) 174.0
E-value 6.0e-42
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951036|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_F03, 5'
(678 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 174 6e-42
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 170 7e-41
tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 164 4e-39
tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 164 5e-39
tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 164 5e-39
tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 163 1e-38
tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 163 1e-38
tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 163 1e-38
tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 157 8e-37
tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 152 1e-35
tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 152 1e-35
tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 150 7e-35
tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 150 7e-35
tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 150 7e-35
tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 150 7e-35
tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 150 7e-35
tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea... 148 4e-34
tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 147 6e-34
tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 146 1e-33
tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 142 2e-32
tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 132 3e-29
tr|Q14K79|Q14K79_PLAAC Putative uncharacterized protein (Fragmen... 130 1e-28
tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 127 6e-28
tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 127 6e-28
tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 127 6e-28
tr|A5AE17|A5AE17_VITVI Putative uncharacterized protein OS=Vitis... 122 2e-26
tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 121 4e-26
tr|Q9AT51|Q9AT51_BRANA Putative uncharacterized protein (Fragmen... 115 2e-24
tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23
tr|B4FPS1|B4FPS1_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23

>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00006608001 PE=4 SV=1
Length = 362

Score = 174 bits (440), Expect = 6e-42
Identities = 94/178 (52%), Positives = 125/178 (70%), Gaps = 2/178 (1%)
Frame = +3

Query: 57 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 236
GQFL+++L SHP+LV RDA +E+SS GTE++LY+RIAE+KA E
Sbjct: 36 GQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEE-HKEESSASGTELVLYRRIAEVKANE 94

Query: 237 RCKALEDIMYALICEKFVEAGISFVPQISKSS--KNQRVDTWLPQDDELESVHSFAALEL 410
R KALE+I+YAL+ +KF++A +S +P IS SS + RVDTW QD +LE +HS A E+
Sbjct: 95 RKKALEEILYALVVQKFMDANVSLIPTISSSSSDSSDRVDTWPSQDGKLEQLHSPEAYEM 154

Query: 411 IREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAASAVYGYFIRRVDKRFQLEKTI 584
I+ HL L+LG R D S AQISKLR+G+ YAAS +YGYF++RVD+RFQLEKT+
Sbjct: 155 IQNHLALILGNR----LGDSTSVAQISKLRVGQVYAASVMYGYFLKRVDQRFQLEKTM 208


>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 434

Score = 170 bits (431), Expect = 7e-41
Identities = 96/186 (51%), Positives = 125/186 (67%), Gaps = 1/186 (0%)
Frame = +3

Query: 57 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 236
GQFL++LL+ HP+L+ RDAAA Q+ S TE++LY+RIAE+KA E
Sbjct: 104 GQFLSQLLKDHPHLLPAAVEQQLERLVADRDAAA-QQDPPSSTSTELVLYRRIAEVKAAE 162

Query: 237 RCKALEDIMYALICEKFVEAGISFVPQISKSSK-NQRVDTWLPQDDELESVHSFAALELI 413
R KALE+IMYALI +KF++A IS +P IS ++DTW QD +LE VHS A E+I
Sbjct: 163 RRKALEEIMYALIVQKFMDARISLIPCISMPDPVTGQIDTWPKQDHKLEGVHSSEAFEMI 222

Query: 414 REHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAASAVYGYFIRRVDKRFQLEKTIANS 593
+ HL+LVLG R D S AQISKLR+G+ YAAS +YGYF+RRVD+RFQLEK++
Sbjct: 223 KNHLSLVLGNR----LLDSSSIAQISKLRVGQVYAASVMYGYFLRRVDQRFQLEKSMKTL 278

Query: 594 TAQLIE 611
+ L E
Sbjct: 279 PSGLNE 284


>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 417

Score = 164 bits (416), Expect = 4e-39
Identities = 87/178 (48%), Positives = 122/178 (68%), Gaps = 2/178 (1%)
Frame = +3

Query: 57 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 236
GQFL+++L SHP+LV RD+ +E S GT+++LY+RIAE KA +
Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSEK-QKEDPSATGTDLVLYRRIAEAKAND 151

Query: 237 RCKALEDIMYALICEKFVEAGISFVPQISKSS--KNQRVDTWLPQDDELESVHSFAALEL 410
R KALE+I+YAL+ +KF++A +S +P I SS + +VDTW QD++LE +HS A E+
Sbjct: 152 RRKALEEILYALVVQKFMDANVSLIPTIGPSSAESSGQVDTWPSQDEKLEQLHSPEAYEM 211

Query: 411 IREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAASAVYGYFIRRVDKRFQLEKTI 584
I+ HL L+LG R D + AQISKLR+G+ YAAS +YGYF++RVD+RFQLEKT+
Sbjct: 212 IQNHLTLILGNR----VGDSTAVAQISKLRIGQVYAASVMYGYFLKRVDQRFQLEKTM 265


>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein
At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana
GN=At1g48450 PE=2 SV=1
Length = 423

Score = 164 bits (415), Expect = 5e-39
Identities = 85/178 (47%), Positives = 124/178 (69%), Gaps = 2/178 (1%)
Frame = +3

Query: 57 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 236
GQFL+++L SHP+LV RDA S++ SS +GT+++LY+RIAE+K +E
Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDIVLYRRIAEVKEKE 152

Query: 237 RCKALEDIMYALICEKFVEAGISFVPQISKSSKNQ--RVDTWLPQDDELESVHSFAALEL 410
R +ALE+I+YAL+ +KF++A ++ VP I+ SS + RVDTW D ELE +HS E+
Sbjct: 153 RRRALEEILYALVVQKFMDANVTLVPSITSSSADPSGRVDTWPTLDGELERLHSPEVYEM 212

Query: 411 IREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAASAVYGYFIRRVDKRFQLEKTI 584
I+ HL+++L R T D + AQISKL +G+ YAAS +YGYF++R+D+RFQLEKT+
Sbjct: 213 IQNHLSIILKNR----TDDLTAVAQISKLGVGQVYAASVMYGYFLKRIDQRFQLEKTM 266


>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2
OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1
Length = 342

Score = 164 bits (415), Expect = 5e-39
Identities = 85/178 (47%), Positives = 124/178 (69%), Gaps = 2/178 (1%)
Frame = +3

Query: 57 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 236
GQFL+++L SHP+LV RDA S++ SS +GT+++LY+RIAE+K +E
Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDIVLYRRIAEVKEKE 152

Query: 237 RCKALEDIMYALICEKFVEAGISFVPQISKSSKNQ--RVDTWLPQDDELESVHSFAALEL 410
R +ALE+I+YAL+ +KF++A ++ VP I+ SS + RVDTW D ELE +HS E+
Sbjct: 153 RRRALEEILYALVVQKFMDANVTLVPSITSSSADPSGRVDTWPTLDGELERLHSPEVYEM 212

Query: 411 IREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAASAVYGYFIRRVDKRFQLEKTI 584
I+ HL+++L R T D + AQISKL +G+ YAAS +YGYF++R+D+RFQLEKT+
Sbjct: 213 IQNHLSIILKNR----TDDLTAVAQISKLGVGQVYAASVMYGYFLKRIDQRFQLEKTM 266


>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized
protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800
PE=2 SV=1
Length = 421

Score = 163 bits (412), Expect = 1e-38
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Frame = +3

Query: 57 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 236
GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK E
Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161

Query: 237 RCKALEDIMYALICEKFVEAGISFVPQISKSS-KNQRVDTWLPQDDELESVHSFAALELI 413
R + LE+I+YAL+ +KF+EA +S VP +S SS + RVDTW + ++LE +HS E+I
Sbjct: 162 RRRTLEEILYALVVQKFMEANVSLVPSVSPSSDPSGRVDTWPTKVEKLERLHSPEMYEMI 221

Query: 414 REHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAASAVYGYFIRRVDKRFQLEKTI 584
HL L+LG R D S AQISKLR+G+ YAAS +YGYF++RVD+RFQLEKT+
Sbjct: 222 HNHLALILGSR----MGDLNSVAQISKLRVGQVYAASVMYGYFLKRVDQRFQLEKTM 274


>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800;
MEB5.2 (Putative uncharacterized protein At3g17800)
OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1
Length = 421

Score = 163 bits (412), Expect = 1e-38
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Frame = +3

Query: 57 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 236
GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK E
Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161

Query: 237 RCKALEDIMYALICEKFVEAGISFVPQISKSS-KNQRVDTWLPQDDELESVHSFAALELI 413
R + LE+I+YAL+ +KF+EA +S VP +S SS + RVDTW + ++LE +HS E+I
Sbjct: 162 RRRTLEEILYALVVQKFMEANVSLVPSVSPSSDPSGRVDTWPTKVEKLERLHSPEMYEMI 221

Query: 414 REHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAASAVYGYFIRRVDKRFQLEKTI 584
HL L+LG R D S AQISKLR+G+ YAAS +YGYF++RVD+RFQLEKT+
Sbjct: 222 HNHLALILGSR----MGDLNSVAQISKLRVGQVYAASVMYGYFLKRVDQRFQLEKTM 274


>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800
OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1
Length = 421

Score = 163 bits (412), Expect = 1e-38
Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Frame = +3

Query: 57 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 236
GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK E
Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161

Query: 237 RCKALEDIMYALICEKFVEAGISFVPQISKSS-KNQRVDTWLPQDDELESVHSFAALELI 413
R + LE+I+YAL+ +KF+EA +S VP +S SS + RVDTW + ++LE +HS E+I
Sbjct: 162 RRRTLEEILYALVVQKFMEANVSLVPSVSPSSDPSGRVDTWPTKVEKLERLHSPEMYEMI 221

Query: 414 REHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAASAVYGYFIRRVDKRFQLEKTI 584
HL L+LG R D S AQISKLR+G+ YAAS +YGYF++RVD+RFQLEKT+
Sbjct: 222 HNHLALILGSR----MGDLNSVAQISKLRVGQVYAASVMYGYFLKRVDQRFQLEKTM 274


>tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 421

Score = 157 bits (396), Expect = 8e-37
Identities = 84/178 (47%), Positives = 118/178 (66%), Gaps = 2/178 (1%)
Frame = +3

Query: 57 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQ--SSPMGTEMILYKRIAELKA 230
GQFL+++L +HP+LV RD A Q Q S T+++LY+RIAE+KA
Sbjct: 97 GQFLSQILINHPHLVPAAVDQQLLQLQPDRDVAHHQQNQDPSPTTSTDLVLYRRIAEVKA 156

Query: 231 QERCKALEDIMYALICEKFVEAGISFVPQISKSSKNQRVDTWLPQDDELESVHSFAALEL 410
ER ALE+I+Y L+ +KF++A IS +P I+ + RVD+W +D +LE +HS A E+
Sbjct: 157 NERRTALEEILYTLVVQKFMDANISLIPSITPDASG-RVDSWSNEDGKLEQLHSNEAYEM 215

Query: 411 IREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAASAVYGYFIRRVDKRFQLEKTI 584
I+ HL L+LG R D S AQISKLR+G+ YAAS +YGYF++RVD+RFQLEK++
Sbjct: 216 IQNHLALILGNRAG----DLSSVAQISKLRVGQVYAASVMYGYFLKRVDQRFQLEKSM 269


>tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00022976001
PE=4 SV=1
Length = 342

Score = 152 bits (385), Expect = 1e-35
Identities = 85/178 (47%), Positives = 116/178 (65%), Gaps = 2/178 (1%)
Frame = +3

Query: 57 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQE 236
G+FL E+L SHP+LV RDA QE SS G E++LY+RIA++KA E
Sbjct: 38 GRFLTEILISHPHLVPAAVERQLEQFQTDRDAEGHKQE-SSASGIELLLYRRIAKVKANE 96

Query: 237 RCKALEDIMYALICEKFVEAGISFVPQISKSS--KNQRVDTWLPQDDELESVHSFAALEL 410
R KALE+I+Y L+ +KFV A + +P++S SS + RVD W D +L +HS A E+
Sbjct: 97 RKKALEEILYVLVVQKFVGANVPLIPRMSPSSLGSSGRVDNWPSLDRDLGELHSPEATEM 156

Query: 411 IREHLNLVLGGRGSADTTDQKSTAQISKLRMGRAYAASAVYGYFIRRVDKRFQLEKTI 584
I+ HL +LG R D S A++SKLR+G+ YAAS +YGYF++RVD+RFQLEKT+
Sbjct: 157 IQNHLAFILGNRFG----DSTSVAKMSKLRVGQVYAASVMYGYFLKRVDERFQLEKTM 210