DK951041 |
Clone id |
TST38A01NGRL0010_F08 |
Library |
TST38 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_F08. 5' end sequence. |
Accession |
DK951041 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL20Contig1 |
Sequence |
CAATATTAATATTCCTTTGATTCTTGGTATTTGGGGTGGAAAAGGACAAGGAAAATCTTT CCAGTGTGAACTAGTGTTCTCAAAGCTCGGAATCAACCCCATCATGATGAGTGCTGGTGA GCTCGAGAGTGGAAATGCTGGTGAACCCGCCTAGCTCATTCGACAGAGATACCGTGAATC TGCGGATGTGATTCAAAAGAAAGCAAAGATGTGTTGTCTCTTTATCAATGATCTTGACGC TGGAGCTGGTCGCATGGGTGGAACAACACAATACACTGTCAACAATCAGATGGTGAATGC AACCCTCAAGAACATTGCTGACAATCCTACCAATGTCCAGCTGCCTGGTGTGTACATTAA TTGAGGAGCTCCCACACGTGCCCCTCATCGTAACTGGAAATGACTTCTCCACACTGTACG CACCCTTGATCCGAGATGGTCGTATGGACAAATTCTACTGGGCGCCCACAAGAGAAGATA GAATTGGAGTTAGCTTGGGTATCTTCCGTCATGATCACGTGCAACACGATTACATTACCA AGATTGTTGATACATTCCCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7X9A0 |
Definition |
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata |
Align length |
118 |
Score (bit) |
221.0 |
E-value |
4.0e-84 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951041|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_F08, 5' (561 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase... 221 4e-84 sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase... 221 3e-83 sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ... 219 3e-83 sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 220 2e-82 sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 217 2e-81 sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ... 212 1e-80 sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ... 208 1e-80 sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ... 214 2e-80 sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 213 2e-80 sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 215 3e-80 sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ... 213 3e-80 sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase... 209 7e-80 sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ... 217 1e-79 sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ... 211 2e-78 sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ... 213 1e-77 sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 199 8e-76 sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ... 160 1e-59 sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ... 160 7e-59 sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ... 84 4e-16 sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ... 74 5e-13 sp|Q9HPF0|CDCH_HALSA Protein cdcH OS=Halobacterium salinarium GN... 35 0.031 sp|O74445|PRS10_SCHPO Probable 26S protease subunit rpt4 OS=Schi... 36 0.11 sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing prote... 36 0.15 sp|P62335|PRS10_SPETR 26S protease regulatory subunit S10B OS=Sp... 35 0.25 sp|P62334|PRS10_MOUSE 26S protease regulatory subunit S10B OS=Mu... 35 0.25 sp|P62333|PRS10_HUMAN 26S protease regulatory subunit S10B OS=Ho... 35 0.25 sp|Q2KIW6|PRS10_BOVIN 26S protease regulatory subunit S10B OS=Bo... 35 0.25 sp|Q6V4S5|SDK2_MOUSE Protein sidekick-2 OS=Mus musculus GN=Sdk2 ... 34 0.43 sp|Q8AV57|SDK2_CHICK Protein sidekick-2 OS=Gallus gallus GN=SDK2... 34 0.43 sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=D... 33 0.73
>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1 Length = 476
Score = 221 bits (562), Expect(2) = 4e-84 Identities = 108/118 (91%), Positives = 113/118 (95%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI IPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 154 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 213
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I KK KMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 214 ADII-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 270
Score = 112 bits (279), Expect(2) = 4e-84 Identities = 53/66 (80%), Positives = 57/66 (86%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 EE P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV GIFR D+V D I K Sbjct: 273 EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVK 332
Query: 543 IVDTFP 560 +VDTFP Sbjct: 333 LVDTFP 338
>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1 Length = 435
Score = 221 bits (562), Expect(2) = 3e-83 Identities = 108/118 (91%), Positives = 113/118 (95%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI IPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 154 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 213
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I KK KMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 214 ADII-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 270
Score = 108 bits (271), Expect(2) = 3e-83 Identities = 51/66 (77%), Positives = 56/66 (84%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 EE P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV GIFR D+V + I K Sbjct: 273 EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVK 332
Query: 543 IVDTFP 560 +VD FP Sbjct: 333 VVDQFP 338
>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1 Length = 413
Score = 219 bits (557), Expect(2) = 3e-83 Identities = 105/118 (88%), Positives = 113/118 (95%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 151 NIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 210
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I KK KMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 211 ADII-KKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 267
Score = 110 bits (276), Expect(2) = 3e-83 Identities = 52/66 (78%), Positives = 56/66 (84%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 EE P VP+IVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIG+ GIFR D V + I K Sbjct: 270 EENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVK 329
Query: 543 IVDTFP 560 +VDTFP Sbjct: 330 LVDTFP 335
>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2 Length = 466
Score = 220 bits (561), Expect(2) = 2e-82 Identities = 107/118 (90%), Positives = 113/118 (95%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 145 NIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 204
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I KK KMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 205 ADII-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 261
Score = 107 bits (266), Expect(2) = 2e-82 Identities = 49/66 (74%), Positives = 57/66 (86%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 E+ P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTR+DR+GV GIFR D+V + I K Sbjct: 264 EDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVK 323
Query: 543 IVDTFP 560 IVD+FP Sbjct: 324 IVDSFP 329
>sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1 Length = 464
Score = 217 bits (552), Expect(2) = 2e-81 Identities = 107/118 (90%), Positives = 112/118 (94%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI IPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 144 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 203
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I KK KMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL NIAD PTNVQLPG+Y Sbjct: 204 ADMI-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 260
Score = 106 bits (265), Expect(2) = 2e-81 Identities = 48/65 (73%), Positives = 56/65 (86%) Frame = +3
Query: 366 ELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITKI 545 E P VP++VTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIGV GIF+ D+V + + KI Sbjct: 264 ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKI 323
Query: 546 VDTFP 560 VDTFP Sbjct: 324 VDTFP 328
>sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3 Length = 433
Score = 212 bits (540), Expect(2) = 1e-80 Identities = 104/118 (88%), Positives = 111/118 (94%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 150 NIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREA 209
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 +D+I KK KM CLFINDLDAGAGRMGGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 210 SDLI-KKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 266
Score = 108 bits (271), Expect(2) = 1e-80 Identities = 49/66 (74%), Positives = 57/66 (86%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 E+ P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV GIFR D V +++ + Sbjct: 269 EDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQ 328
Query: 543 IVDTFP 560 +VDTFP Sbjct: 329 LVDTFP 334
>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1 Length = 437
Score = 208 bits (530), Expect(2) = 1e-80 Identities = 101/118 (85%), Positives = 111/118 (94%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 N+ +PLILGIWGGKGQGKSFQCELVF+K+ I+PIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 154 NMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREA 213
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I +K KMC LFINDLDAGAGR+GGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 214 ADII-RKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 270
Score = 112 bits (280), Expect(2) = 1e-80 Identities = 52/66 (78%), Positives = 58/66 (87%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 EE P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV +GIFR D+V + I K Sbjct: 273 EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVK 332
Query: 543 IVDTFP 560 +VDTFP Sbjct: 333 LVDTFP 338
>sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1 Length = 459
Score = 214 bits (546), Expect(2) = 2e-80 Identities = 103/118 (87%), Positives = 111/118 (94%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILG+WGGKGQGKSFQCELVF K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 153 NIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 212
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 A++I +K MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 213 AEII-RKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 269
Score = 105 bits (263), Expect(2) = 2e-80 Identities = 49/66 (74%), Positives = 56/66 (84%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 +E VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV GIFR D+V + + K Sbjct: 272 QENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVK 331
Query: 543 IVDTFP 560 IVD+FP Sbjct: 332 IVDSFP 337
>sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1 Length = 439
Score = 213 bits (542), Expect(2) = 2e-80 Identities = 102/118 (86%), Positives = 111/118 (94%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILG+WGGKGQGKSFQCELVF K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 158 NIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 217
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 A++I +K +CCLFINDLDAGAGRMGGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 218 AEII-RKGNICCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 274
Score = 107 bits (266), Expect(2) = 2e-80 Identities = 50/66 (75%), Positives = 56/66 (84%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 +E VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV GIFR D+V + + K Sbjct: 277 QENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIK 336
Query: 543 IVDTFP 560 IVDTFP Sbjct: 337 IVDTFP 342
>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 442
Score = 215 bits (547), Expect(2) = 3e-80 Identities = 104/118 (88%), Positives = 111/118 (94%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVF K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 158 NIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 217
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 A++I +K MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 218 AEII-RKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 274
Score = 104 bits (260), Expect(2) = 3e-80 Identities = 49/66 (74%), Positives = 55/66 (83%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 +E VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV GIFR D+V + + K Sbjct: 277 QENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVK 336
Query: 543 IVDTFP 560 IVD FP Sbjct: 337 IVDNFP 342
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PFQ2 |
Definition |
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
118 |
Score (bit) |
222.0 |
E-value |
2.0e-83 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951041|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_F08, 5' (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul... 222 2e-83 tr|A9PG25|A9PG25_POPTR Putative uncharacterized protein OS=Popul... 222 3e-83 tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul... 224 4e-83 tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul... 222 4e-83 tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul... 224 8e-83 tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 220 8e-83 tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ... 219 2e-82 tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis... 219 2e-82 tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom... 219 6e-82 tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car... 218 8e-82 tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome... 218 1e-81 tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza... 220 2e-81 tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 219 2e-81 tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen... 220 2e-81 tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 219 2e-81 tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 219 2e-81 tr|Q9ATC1|Q9ATC1_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 219 2e-81 tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t... 218 2e-81 tr|Q7X9A1|Q7X9A1_DESAN Rubisco activase beta form OS=Deschampsia... 217 2e-81 tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car... 216 4e-81 tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car... 216 4e-81 tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten... 212 4e-81 tr|Q9AXG0|Q9AXG0_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 217 5e-81 tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car... 216 7e-81 tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car... 216 7e-81 tr|Q8L5T3|Q8L5T3_CHEQI Rubisco activase OS=Chenopodium quinoa GN... 214 7e-81 tr|Q05C31|Q05C31_HUMAN Putative uncharacterized protein OS=Homo ... 217 7e-81 tr|Q9M4V3|Q9M4V3_WHEAT Ribulose bisphosphate carboxylase activas... 216 9e-81 tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten... 211 1e-80 tr|Q308Y6|Q308Y6_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 217 2e-80
>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 475
Score = 222 bits (566), Expect(2) = 2e-83 Identities = 105/118 (88%), Positives = 114/118 (96%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 156 NIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREA 215
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I+KK KMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 216 ADIIKKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 273
Score = 111 bits (278), Expect(2) = 2e-83 Identities = 51/66 (77%), Positives = 58/66 (87%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 E+ P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV +GIF+ D+V D I K Sbjct: 276 EDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFKTDNVPEDDIVK 335
Query: 543 IVDTFP 560 +VDTFP Sbjct: 336 LVDTFP 341
>tr|A9PG25|A9PG25_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 361
Score = 222 bits (566), Expect(2) = 3e-83 Identities = 105/118 (88%), Positives = 114/118 (96%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 77 NIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREA 136
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I+KK KMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 137 ADIIKKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 194
Score = 111 bits (277), Expect(2) = 3e-83 Identities = 51/66 (77%), Positives = 58/66 (87%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 E+ P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV +GIF+ D+V D I K Sbjct: 197 EDNPRVPVIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFKTDNVPEDDIVK 256
Query: 543 IVDTFP 560 +VDTFP Sbjct: 257 LVDTFP 262
>tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 476
Score = 224 bits (570), Expect(2) = 4e-83 Identities = 105/118 (88%), Positives = 114/118 (96%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 155 NIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 214
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I+KK KMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 215 ADIIKKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 272
Score = 108 bits (271), Expect(2) = 4e-83 Identities = 49/66 (74%), Positives = 57/66 (86%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 EE P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIGV +GIF+ D + + I K Sbjct: 275 EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCIGIFKSDKIPKEDIVK 334
Query: 543 IVDTFP 560 +VDTFP Sbjct: 335 LVDTFP 340
>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 461
Score = 222 bits (566), Expect(2) = 4e-83 Identities = 105/118 (88%), Positives = 114/118 (96%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 156 NIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREA 215
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I+KK KMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 216 ADIIKKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 273
Score = 110 bits (275), Expect(2) = 4e-83 Identities = 50/66 (75%), Positives = 58/66 (87%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 E+ P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIGV +GIF+ D+V D I K Sbjct: 276 EDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCIGIFKTDNVPQDDIVK 335
Query: 543 IVDTFP 560 +VDTFP Sbjct: 336 LVDTFP 341
>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 476
Score = 224 bits (571), Expect(2) = 8e-83 Identities = 106/118 (89%), Positives = 114/118 (96%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 155 NIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 214
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I+KK KMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 215 ADIIKKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 272
Score = 107 bits (268), Expect(2) = 8e-83 Identities = 48/66 (72%), Positives = 57/66 (86%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 E+ P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIGV +GIF+ D + + I K Sbjct: 275 EDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCIGIFKSDKIAKEDIVK 334
Query: 543 IVDTFP 560 +VDTFP Sbjct: 335 LVDTFP 340
>tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 OS=Gossypium hirsutum PE=2 SV=1 Length = 438
Score = 220 bits (561), Expect(2) = 8e-83 Identities = 107/118 (90%), Positives = 113/118 (95%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 157 NIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 216
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I KK KMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 217 ADII-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 273
Score = 111 bits (278), Expect(2) = 8e-83 Identities = 53/66 (80%), Positives = 57/66 (86%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 EE P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV GIFR D+V D I K Sbjct: 276 EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPVDDIVK 335
Query: 543 IVDTFP 560 +VDTFP Sbjct: 336 LVDTFP 341
>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001 PE=4 SV=1 Length = 472
Score = 219 bits (558), Expect(2) = 2e-82 Identities = 106/118 (89%), Positives = 113/118 (95%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 154 NIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 213
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I +K KMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 214 ADII-RKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 270
Score = 111 bits (277), Expect(2) = 2e-82 Identities = 53/66 (80%), Positives = 56/66 (84%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 EE P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAP REDRIGV GIFR D+V D I K Sbjct: 273 EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPNREDRIGVCKGIFRSDNVPDDDIVK 332
Query: 543 IVDTFP 560 IVDTFP Sbjct: 333 IVDTFP 338
>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039112 PE=4 SV=1 Length = 472
Score = 219 bits (558), Expect(2) = 2e-82 Identities = 106/118 (89%), Positives = 113/118 (95%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 154 NIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 213
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I +K KMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 214 ADII-RKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 270
Score = 111 bits (277), Expect(2) = 2e-82 Identities = 53/66 (80%), Positives = 56/66 (84%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 EE P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAP REDRIGV GIFR D+V D I K Sbjct: 273 EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPNREDRIGVCKGIFRSDNVPDDDIVK 332
Query: 543 IVDTFP 560 IVDTFP Sbjct: 333 IVDTFP 338
>tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018440001 PE=4 SV=1 Length = 438
Score = 219 bits (558), Expect(2) = 6e-82 Identities = 106/118 (89%), Positives = 113/118 (95%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 155 NIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 214
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I +K KMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 215 ADII-RKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 271
Score = 109 bits (273), Expect(2) = 6e-82 Identities = 52/66 (78%), Positives = 57/66 (86%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 EE P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIGV GIFR D+V + I K Sbjct: 274 EENPRVPVIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPVEDIVK 333
Query: 543 IVDTFP 560 +VDTFP Sbjct: 334 LVDTFP 339
>tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase activase OS=Flaveria bidentis PE=2 SV=1 Length = 438
Score = 218 bits (554), Expect(2) = 8e-82 Identities = 105/118 (88%), Positives = 112/118 (94%) Frame = +2
Query: 2 NINIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA*LIRQRYRES 181 NI +PLILG+WGGKGQGKSFQCELVF+K+GI PIMMSAGELESGNAGEPA LIRQRYRE+ Sbjct: 152 NIKVPLILGVWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREA 211
Query: 182 ADVIQKKAKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLKNIADNPTNVQLPGVY 355 AD+I KK KMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL NIADNPTNVQLPG+Y Sbjct: 212 ADII-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY 268
Score = 110 bits (276), Expect(2) = 8e-82 Identities = 51/66 (77%), Positives = 58/66 (87%) Frame = +3
Query: 363 EELPHVPLIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGVSLGIFRHDHVQHDYITK 542 EE P VP+IVTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIGV +GIFR D+V + I K Sbjct: 271 EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCIGIFRTDNVPKEDIVK 330
Query: 543 IVDTFP 560 +VDTFP Sbjct: 331 LVDTFP 336
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