BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951048|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_F15, 5'
         (235 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P07897|PGCA_RAT Aggrecan core protein OS=Rattus norvegicus GN...    32   1.3  
sp|Q924A2|CIC_MOUSE Protein capicua homolog OS=Mus musculus GN=C...    31   1.7  
sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha ...    30   2.9  
sp|P80015|CAP7_PIG Azurocidin OS=Sus scrofa PE=1 SV=1                  30   3.8  
sp|Q5SWY7|FA83G_MOUSE Protein FAM83G OS=Mus musculus GN=Fam83g P...    30   3.8  
sp|P08485|ACM4_RAT Muscarinic acetylcholine receptor M4 OS=Rattu...    29   6.4  
sp|P32211|ACM4_MOUSE Muscarinic acetylcholine receptor M4 OS=Mus...    29   6.4  

>sp|P07897|PGCA_RAT Aggrecan core protein OS=Rattus norvegicus GN=Acan
            PE=1 SV=2
          Length = 2124

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 235  EMETSDHSPDLCTLLSTGGAGLAPGTEGRAEFTGEPDKEEGRE 107
            ++ETS    D  ++L TG  GL     G  + +G P  EEG E
Sbjct: 933  DLETSTSGIDGASVLPTGRGGLETSASGVEDLSGLPSGEEGSE 975


>sp|Q924A2|CIC_MOUSE Protein capicua homolog OS=Mus musculus GN=Cic
           PE=1 SV=2
          Length = 2510

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -2

Query: 168 PRAQKAEPNSL--ASQIRKRDERQKGYLTT*EKRLRLWRPPWLQDSLLRQPPGG 13
           P +    P +L  A Q   R+  +  ++T     LRL RPPW   +LLR+ P G
Sbjct: 302 PSSHAGPPGTLPQAQQTLHREPEEAVWVT--RSSLRLLRPPWEPGALLRKHPAG 353


>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha
           OS=Homo sapiens GN=TRIM24 PE=1 SV=3
          Length = 1050

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -1

Query: 190 STGGAGLAPGTEGRAEFTGEPDKEEGREAERL 95
           ++GG   AP  E  AE    PD E G EA RL
Sbjct: 19  ASGGPSAAPSGENEAESRQGPDSERGGEAARL 50


>sp|P80015|CAP7_PIG Azurocidin OS=Sus scrofa PE=1 SV=1
          Length = 219

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = -2

Query: 225 PQIIHQICVLFFQR------GERAWPRAQKAEPNSLASQIRKRDERQKGYLTT*EKRLRL 64
           P +   +C+  F R      G+R  P         +AS +R+R  R  G+ T    R+ L
Sbjct: 151 PCLPRDMCIGVFSRRGRISQGDRGTPLVCNGLAQGVASFLRRRFRRSSGFFT----RVAL 206

Query: 63  WRPPWLQDSLLRQPP 19
           +R  W+ DS+L  PP
Sbjct: 207 FR-NWI-DSVLNNPP 219


>sp|Q5SWY7|FA83G_MOUSE Protein FAM83G OS=Mus musculus GN=Fam83g PE=2
           SV=1
          Length = 812

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -3

Query: 194 SFNGGSGLGPGHRRPS 147
           S +G SG GPGHRRPS
Sbjct: 594 SLSGSSGPGPGHRRPS 609


>sp|P08485|ACM4_RAT Muscarinic acetylcholine receptor M4 OS=Rattus
           norvegicus GN=Chrm4 PE=2 SV=1
          Length = 478

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 141 SLASQIRKRDERQKGYLTT*EKRLRLWRPPWLQDSLLRQPPGGTS 7
           SLAS+ R    R +G      K L   + P ++ S+ + PPGG S
Sbjct: 218 SLASRSRVHKHRPEGPKEKKAKTLAFLKSPLMKPSIKKPPPGGAS 262


>sp|P32211|ACM4_MOUSE Muscarinic acetylcholine receptor M4 OS=Mus
           musculus GN=Chrm4 PE=2 SV=1
          Length = 479

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 141 SLASQIRKRDERQKGYLTT*EKRLRLWRPPWLQDSLLRQPPGGTS 7
           SLAS+ R    R +G      K L   + P ++ S+ + PPGG S
Sbjct: 218 SLASRSRVHKHRPEGPKEKKAKTLAFLKSPLMKPSIKKPPPGGAS 262

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951048|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_F15, 5'
         (235 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7G5G8|B7G5G8_PHATR Predicted protein OS=Phaeodactylum tricor...    39   0.13 

>tr|B7G5G8|B7G5G8_PHATR Predicted protein OS=Phaeodactylum
           tricornutum CCAP 1055/1 GN=PHATRDRAFT_47949 PE=4 SV=1
          Length = 523

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -1

Query: 232 METSDHSPDLCTLLSTGGAGLAPGTEGRAEFTGEPDKEEGREAER 98
           +E  D SPDLC  + TG   +A GTE +  F+G+  + + R  +R
Sbjct: 234 LERGDRSPDLCVGVMTGSPNVASGTEQQDRFSGDAFEGDSRSTDR 278