BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951068|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_G12, 5'
         (450 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrel...    30   4.7  
sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5 OS=Sch...    29   8.0  

>sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrelia
           burgdorferi GN=recB PE=3 SV=1
          Length = 1169

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 201 IVLVPQEILGLISTSGEINKEKNLWVDV*DS*LIVTKPQRINLGKKVGINKSGFV 365
           IVL+ +  + LI+   +I  EKNLW+ + +    +TK Q+I    K  IN  G +
Sbjct: 624 IVLLEKNEITLINAINKITFEKNLWIKIAN----ITKDQKIIEWAKNKINYKGLL 674


>sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5
           OS=Schizosaccharomyces pombe GN=orc5 PE=1 SV=2
          Length = 455

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
 Frame = +3

Query: 231 LISTSGEINKEKNLWVDV*DS*LIVTKPQRI--------NLGKKVGINKSGFVKII 374
           L+ T+ +++KE+N+W+++ D   +     RI        ++  K GIN SGF+ ++
Sbjct: 51  LLRTAFDLSKEENVWINLQDCFTVAHFWYRILIKVGVDKDIALKKGINISGFIYLL 106

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951068|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_G12, 5'
         (450 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri...    35   1.9  
tr|B6VS56|B6VS56_9BACE Putative uncharacterized protein OS=Bacte...    33   9.4  

>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
           shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
          Length = 319

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/50 (32%), Positives = 31/50 (62%)
 Frame = -3

Query: 172 LK*MSDEID*STSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 23
           LK +++E+D ST +     ++++F A  +F+L VNL + R++  Q  C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283


>tr|B6VS56|B6VS56_9BACE Putative uncharacterized protein
           OS=Bacteroides dorei DSM 17855 GN=BACDOR_00106 PE=4 SV=1
          Length = 114

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = -2

Query: 416 SCCNEGSRSTKEMCNNLDKPGFIYSNFLSQIYSLRFSDDESAIL 285
           SCC E   +T   C++  +   ++SN++S++++  F+ D SA +
Sbjct: 45  SCCQENKFNTCAECSHDVRECKLFSNWISKVFAFLFNSDRSACI 88