| DK951070 | 
  
  
    | Clone id | 
    TST38A01NGRL0010_G14 | 
  
  
    | Library | 
    TST38 | 
  
  
    | Length | 
    401 | 
  
  
    | Definition | 
    Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_G14. 5' end sequence. | 
  
  
    | Accession | 
    DK951070 | 
  
  
    | Tissue type | 
    prothallia | 
  
  
    | Developmental stage | 
    gametophyte | 
  
  
    | Contig ID | 
    CL811Contig1 | 
  
  
    | Sequence | 
    GCAATGCTTTTTTATAATCCCAACTTTGTACACCAAAGTTGGGCAGCGACTGCAGTCCCA TCTAATAACAGTTTGGCAACAACAGTCTCTTCCTCGTCGATATCATCGCTTCTTCCACCA TCTCCAGGGGGTGTCGGATCCTCTACTCTCATTCTTTCGGGTAAGCACACGTCCTCCTCT GTCAGTTTTAGCTCATCTCGTAGAACAAAATGTACCCCAGCCATGGCGGTAGCCCTCCCT GTGCTGACATTCGAGGGGAAGGCCTCCGGCACAGAAGTGGAATTGGACTTGAAGTGTGCT CGACCAGAGACAGCACGTGCTGTGGTGCACAGAGGTTTGATAACGGAGCTACAAAACAAG AGGAGGGGGACTGCTTCGACTCTGACGAGAGGGGAGGTGAG  | 
  
  
    | ■■Homology search results ■■ | 
    - | 
  
  
    | Swiss-Prot  (release 56.9) | 
    Link to BlastX Result : Swiss-Prot  | 
  
  
    | sp_hit_id | 
    O49937 | 
  
  
    |     Definition | 
    sp|O49937|RK4_SPIOL 50S ribosomal protein L4, chloroplastic OS=Spinacia oleracea | 
  
  
    |     Align length | 
    57 | 
  
  
    |     Score (bit) | 
    74.7 | 
  
  
    |     E-value | 
    1.0e-13 | 
  
  
    |     Report | 
     BLASTX 2.2.19 [Nov-02-2008]
 
  Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,  Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),  "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs",  Nucleic Acids Res. 25:3389-3402.
  Query= DK951070|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_G14, 5'          (369 letters)
  Database: uniprot_sprot.fasta             412,525 sequences; 148,809,765 total letters
  Searching..................................................done
 
 
                                                                   Score    E Sequences producing significant alignments:                      (bits) Value
  sp|O49937|RK4_SPIOL 50S ribosomal protein L4, chloroplastic OS=S...    75   1e-13 sp|O50061|RK4_ARATH 50S ribosomal protein L4, chloroplastic OS=A...    75   1e-13 sp|O80361|RK4_TOBAC 50S ribosomal protein L4, chloroplastic OS=N...    66   6e-11 sp|Q8DMN0|RL4_THEEB 50S ribosomal protein L4 OS=Thermosynechococ...    54   2e-07 sp|Q318I5|RL4_PROM9 50S ribosomal protein L4 OS=Prochlorococcus ...    54   2e-07 sp|Q7UZU8|RL4_PROMP 50S ribosomal protein L4 OS=Prochlorococcus ...    53   4e-07 sp|A2BTD6|RL4_PROMS 50S ribosomal protein L4 OS=Prochlorococcus ...    53   5e-07 sp|A3PF46|RL4_PROM0 50S ribosomal protein L4 OS=Prochlorococcus ...    53   5e-07 sp|A8G761|RL4_PROM2 50S ribosomal protein L4 OS=Prochlorococcus ...    52   7e-07 sp|A2BYT5|RL4_PROM5 50S ribosomal protein L4 OS=Prochlorococcus ...    50   3e-06 sp|Q46IR0|RL4_PROMT 50S ribosomal protein L4 OS=Prochlorococcus ...    47   2e-05 sp|B0C1D4|RL4_ACAM1 50S ribosomal protein L4 OS=Acaryochloris ma...    47   2e-05 sp|Q7NPG9|RL4_GLOVI 50S ribosomal protein L4 OS=Gloeobacter viol...    47   4e-05 sp|B0JI02|RL4_MICAN 50S ribosomal protein L4 OS=Microcystis aeru...    46   7e-05 sp|Q7U4J9|RL4_SYNPX 50S ribosomal protein L4 OS=Synechococcus sp...    45   9e-05 sp|A5GIU4|RL4_SYNPW 50S ribosomal protein L4 OS=Synechococcus sp...    45   9e-05 sp|Q3AMN1|RL4_SYNSC 50S ribosomal protein L4 OS=Synechococcus sp...    45   1e-04 sp|O24690|RL4_SYNP6 50S ribosomal protein L4 OS=Synechococcus sp...    45   1e-04 sp|Q31L08|RL4_SYNE7 50S ribosomal protein L4 OS=Synechococcus el...    45   1e-04 sp|Q7V9W3|RL4_PROMA 50S ribosomal protein L4 OS=Prochlorococcus ...    45   1e-04 sp|Q0ID06|RL4_SYNS3 50S ribosomal protein L4 OS=Synechococcus sp...    44   2e-04 sp|Q110A8|RL4_TRIEI 50S ribosomal protein L4 OS=Trichodesmium er...    44   3e-04 sp|Q3AUW2|RL4_SYNS9 50S ribosomal protein L4 OS=Synechococcus sp...    43   4e-04 sp|Q2JIM6|RL4_SYNJB 50S ribosomal protein L4 OS=Synechococcus sp...    42   7e-04 sp|Q2JV82|RL4_SYNJA 50S ribosomal protein L4 OS=Synechococcus sp...    42   7e-04 sp|Q7V541|RL4_PROMM 50S ribosomal protein L4 OS=Prochlorococcus ...    42   7e-04 sp|A2CC28|RL4_PROM3 50S ribosomal protein L4 OS=Prochlorococcus ...    42   7e-04 sp|Q3MFC0|RL4_ANAVT 50S ribosomal protein L4 OS=Anabaena variabi...    42   0.001 sp|Q8YPI0|RL4_ANASP 50S ribosomal protein L4 OS=Anabaena sp. (st...    42   0.001 sp|P73319|RL4_SYNY3 50S ribosomal protein L4 OS=Synechocystis sp...    39   0.006
  >sp|O49937|RK4_SPIOL 50S ribosomal protein L4, chloroplastic            OS=Spinacia oleracea GN=RPL4 PE=1 SV=1           Length = 293
   Score = 74.7 bits (182), Expect = 1e-13  Identities = 40/57 (70%), Positives = 44/57 (77%)  Frame = +2
  Query: 197 VALPVLTFEGKASGTEVELDLKCARPETARAVVHRGLITELQNKRRGTASTLTRGEV 367            + LP+L F G+  G E  L+LK A PE ARAVVHRGLIT LQNKRRGTASTLTR EV Sbjct: 53  IPLPILNFSGEKVG-ETFLNLKTAPPEKARAVVHRGLITHLQNKRRGTASTLTRAEV 108
 
  >sp|O50061|RK4_ARATH 50S ribosomal protein L4, chloroplastic            OS=Arabidopsis thaliana GN=RPL4 PE=2 SV=2           Length = 282
   Score = 74.7 bits (182), Expect = 1e-13  Identities = 38/55 (69%), Positives = 45/55 (81%)  Frame = +2
  Query: 203 LPVLTFEGKASGTEVELDLKCARPETARAVVHRGLITELQNKRRGTASTLTRGEV 367            LP+L+FEG+  G E  LDLK A  +TARAVVHR ++T+L NKRRGTASTLTRGEV Sbjct: 54  LPILSFEGEKVG-ETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEV 107
 
  >sp|O80361|RK4_TOBAC 50S ribosomal protein L4, chloroplastic            OS=Nicotiana tabacum GN=RPL4 PE=2 SV=1           Length = 282
   Score = 65.9 bits (159), Expect = 6e-11  Identities = 34/55 (61%), Positives = 44/55 (80%)  Frame = +2
  Query: 203 LPVLTFEGKASGTEVELDLKCARPETARAVVHRGLITELQNKRRGTASTLTRGEV 367            +P+L+F+G   G+   L+LK A  +TARAVVHRGL T+L+N+RRGTASTLTR EV Sbjct: 48  IPILSFDGAEVGSTT-LNLKSAPLDTARAVVHRGLTTDLRNQRRGTASTLTRSEV 101
 
  >sp|Q8DMN0|RL4_THEEB 50S ribosomal protein L4 OS=Thermosynechococcus            elongatus (strain BP-1) GN=rplD PE=3 SV=1           Length = 210
   Score = 54.3 bits (129), Expect = 2e-07  Identities = 30/57 (52%), Positives = 37/57 (64%)  Frame = +2
  Query: 197 VALPVLTFEGKASGTEVELDLKCARPETARAVVHRGLITELQNKRRGTASTLTRGEV 367            VA  V  ++G  SG E  LDL  A+PETA  +VHR L+ +L N R+GT ST TR EV Sbjct: 2   VACVVKDWQGADSG-EATLDLATAKPETASHIVHRALVRQLANARQGTVSTKTRAEV 57
 
  >sp|Q318I5|RL4_PROM9 50S ribosomal protein L4 OS=Prochlorococcus            marinus (strain MIT 9312) GN=rplD PE=3 SV=1           Length = 210
   Score = 53.9 bits (128), Expect = 2e-07  Identities = 27/55 (49%), Positives = 40/55 (72%)  Frame = +2
  Query: 203 LPVLTFEGKASGTEVELDLKCARPETARAVVHRGLITELQNKRRGTASTLTRGEV 367            +  L ++GK SG EV+LDL  A+  ++  ++HR ++ +L NKR+GTASTLTR EV Sbjct: 4   IETLKWDGKKSG-EVKLDLTVAKETSSADLIHRAVLRQLANKRQGTASTLTRSEV 57
 
  >sp|Q7UZU8|RL4_PROMP 50S ribosomal protein L4 OS=Prochlorococcus            marinus subsp. pastoris (strain CCMP1378 / MED4) GN=rplD            PE=3 SV=1           Length = 210
   Score = 53.1 bits (126), Expect = 4e-07  Identities = 26/55 (47%), Positives = 40/55 (72%)  Frame = +2
  Query: 203 LPVLTFEGKASGTEVELDLKCARPETARAVVHRGLITELQNKRRGTASTLTRGEV 367            L  L ++GK +G +V +DLK A+  ++  ++HR ++ +L NKR+GTASTLTR EV Sbjct: 4   LETLKWDGKKAG-KVSIDLKVAKETSSADLIHRAVLRQLANKRQGTASTLTRSEV 57
 
  >sp|A2BTD6|RL4_PROMS 50S ribosomal protein L4 OS=Prochlorococcus            marinus (strain AS9601) GN=rplD PE=3 SV=1           Length = 210
   Score = 52.8 bits (125), Expect = 5e-07  Identities = 27/55 (49%), Positives = 39/55 (70%)  Frame = +2
  Query: 203 LPVLTFEGKASGTEVELDLKCARPETARAVVHRGLITELQNKRRGTASTLTRGEV 367            L  L ++GK SG +V LDL  A+  ++  ++HR ++ +L NKR+GTASTLTR EV Sbjct: 4   LETLKWDGKKSG-KVSLDLAVAKETSSADLIHRAVLRQLANKRQGTASTLTRSEV 57
 
  >sp|A3PF46|RL4_PROM0 50S ribosomal protein L4 OS=Prochlorococcus            marinus (strain MIT 9301) GN=rplD PE=3 SV=1           Length = 210
   Score = 52.8 bits (125), Expect = 5e-07  Identities = 27/55 (49%), Positives = 39/55 (70%)  Frame = +2
  Query: 203 LPVLTFEGKASGTEVELDLKCARPETARAVVHRGLITELQNKRRGTASTLTRGEV 367            L  L ++GK SG +V LDL  A+  ++  ++HR ++ +L NKR+GTASTLTR EV Sbjct: 4   LETLKWDGKKSG-KVSLDLAVAKKTSSADLIHRAVLRQLANKRQGTASTLTRSEV 57
 
  >sp|A8G761|RL4_PROM2 50S ribosomal protein L4 OS=Prochlorococcus            marinus (strain MIT 9215) GN=rplD PE=3 SV=1           Length = 210
   Score = 52.4 bits (124), Expect = 7e-07  Identities = 27/55 (49%), Positives = 39/55 (70%)  Frame = +2
  Query: 203 LPVLTFEGKASGTEVELDLKCARPETARAVVHRGLITELQNKRRGTASTLTRGEV 367            L  L ++GK SG +V LDL  A+  ++  ++HR ++ +L NKR+GTASTLTR EV Sbjct: 4   LETLKWDGKKSG-KVTLDLTVAKETSSADLIHRAVLRQLANKRQGTASTLTRSEV 57
 
  >sp|A2BYT5|RL4_PROM5 50S ribosomal protein L4 OS=Prochlorococcus            marinus (strain MIT 9515) GN=rplD PE=3 SV=1           Length = 210
   Score = 50.4 bits (119), Expect = 3e-06  Identities = 25/55 (45%), Positives = 39/55 (70%)  Frame = +2
  Query: 203 LPVLTFEGKASGTEVELDLKCARPETARAVVHRGLITELQNKRRGTASTLTRGEV 367            L  L ++GK  G +V +DLK A+  ++  ++HR ++ +L N+R+GTASTLTR EV Sbjct: 4   LETLKWDGKKVG-KVSIDLKVAKETSSSDLIHRAVLRQLANQRQGTASTLTRSEV 57
 
 
   | 
  
  
    | TrEMBL  (release 39.9) | 
    Link to BlastX Result : TrEMBL  | 
  
  
    | tr_hit_id | 
    A9NU11 | 
  
  
    |     Definition | 
    tr|A9NU11|A9NU11_PICSI Putative uncharacterized protein OS=Picea sitchensis | 
  
  
    |     Align length | 
    66 | 
  
  
    |     Score (bit) | 
    95.1 | 
  
  
    |     E-value | 
    2.0e-18 | 
  
  
    |     Report | 
      |