DK951079 |
Clone id |
TST38A01NGRL0010_G24 |
Library |
TST38 |
Length |
677 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_G24. 5' end sequence. |
Accession |
DK951079 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1167Contig1 |
Sequence |
GATCGATCTGTTTGGACTGGTGAGAAGCGCGCAAGCAGAGAAGTGGCTATGGCGCTACTC AACTCGAAGATCGTGGGTCATCACGTGAATGCTCCTTGCTTTAAGTACTTGCATGCGGAA CAACCAGCCATCACGAAGCAGACTGTGGGTTTCACGCCGATGCCTCTTTTTGCCCTGCGC AGAAACAGAGCATGCCCCTCGAAGCTCATCTGCTCTGTTCATGAAGGCGCCCTTCCTGTT GCTTCTACCTCTCCCTTGCCCGCCAGCAATGTGCAAGGAACCTCTTACAGCCCTCCTTCT TCTGCCGTGCAATATGCGGAGGAGTTCATTGAGAAGACTATATTCAATTGCAGATTTCTT ACCCTGATGGGAGTTGTGGGCTCCCTTACTGGTTCTGTCTTATGCTTCCTTAAGGGATGT TCCTTTGTGGTGGAGTCATTCAGAGAGTATTTTTTGACTTGCTTGCATGGCGTTGGCACG GGGAAGGTCATCCTGCTACTTGTGGAAGCAGTAGATGTATATCTCATGGGGACTGTCATG CTCATTTTTGGAATGGGACTTTATGAGCTTTTCATAAGCACCTTGGATGTGCCGGGTGGT AATTGCGCCTCTGGGGGCTCAAGAACGACGGTTTGTGGGTCGAATTTATTTGGCCTTTTC CGATTGAGGGAGAGGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZEZ0 |
Definition |
sp|Q9ZEZ0|YREP_BUCAI UPF0114 protein in repA1-repA2 intergenic region OS=Buchnera aphidicola subsp. Acyrthosiphon pisum |
Align length |
91 |
Score (bit) |
38.9 |
E-value |
0.025 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NWL7 |
Definition |
tr|A9NWL7|A9NWL7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
119 |
Score (bit) |
181.0 |
E-value |
3.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951079|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0010_G24, 5' (677 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NWL7|A9NWL7_PICSI Putative uncharacterized protein OS=Picea... 181 3e-44 tr|A9TW38|A9TW38_PHYPA Predicted protein OS=Physcomitrella paten... 159 2e-37 tr|A9NPX7|A9NPX7_PICSI Putative uncharacterized protein OS=Picea... 153 8e-36 tr|Q94JM4|Q94JM4_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thalia... 136 1e-30 tr|Q940D6|Q940D6_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thalia... 133 1e-29 tr|A7Q232|A7Q232_VITVI Chromosome chr13 scaffold_45, whole genom... 133 1e-29 tr|B6SKX4|B6SKX4_MAIZE Uncharacterized protein UPF0114 OS=Zea ma... 128 4e-28 tr|Q8H3C6|Q8H3C6_ORYSJ Os07g0656700 protein OS=Oryza sativa subs... 127 8e-28 tr|B4FCT5|B4FCT5_MAIZE Putative uncharacterized protein OS=Zea m... 127 8e-28 tr|A7QKN2|A7QKN2_VITVI Chromosome chr2 scaffold_113, whole genom... 127 8e-28 tr|A2YPH6|A2YPH6_ORYSI Putative uncharacterized protein OS=Oryza... 127 8e-28 tr|A9RFF8|A9RFF8_PHYPA Predicted protein OS=Physcomitrella paten... 125 2e-27 tr|B8B5E4|B8B5E4_ORYSI Putative uncharacterized protein OS=Oryza... 125 3e-27 tr|Q5Z9G6|Q5Z9G6_ORYSJ Os06g0710300 protein OS=Oryza sativa subs... 124 4e-27 tr|A3BFA7|A3BFA7_ORYSJ Putative uncharacterized protein OS=Oryza... 124 4e-27 tr|A2YGW0|A2YGW0_ORYSI Putative uncharacterized protein OS=Oryza... 124 4e-27 tr|Q9FNA1|Q9FNA1_ARATH Genomic DNA, chromosome 5, P1 clone:MSH12... 120 8e-26 tr|Q8L645|Q8L645_ARATH Putative uncharacterized protein At5g1372... 120 8e-26 tr|A5AN14|A5AN14_VITVI Putative uncharacterized protein OS=Vitis... 120 1e-25 tr|A9TX04|A9TX04_PHYPA Predicted protein (Fragment) OS=Physcomit... 117 7e-25 tr|Q7EYX5|Q7EYX5_ORYSJ Os07g0656600 protein OS=Oryza sativa subs... 116 1e-24 tr|B4FTW2|B4FTW2_MAIZE Putative uncharacterized protein OS=Zea m... 111 5e-23 tr|B6U4B2|B6U4B2_MAIZE Uncharacterized protein UPF0114 OS=Zea ma... 110 8e-23 tr|A7NTK8|A7NTK8_VITVI Chromosome chr18 scaffold_1, whole genome... 105 2e-21 tr|O65710|O65710_ARATH Putative uncharacterized protein AT4g1939... 102 3e-20 tr|A3BMZ9|A3BMZ9_ORYSJ Putative uncharacterized protein OS=Oryza... 91 7e-17 tr|Q7Y1G8|Q7Y1G8_ORYSJ Os03g0739700 protein OS=Oryza sativa subs... 85 5e-15 tr|A2XLU1|A2XLU1_ORYSI Putative uncharacterized protein OS=Oryza... 85 5e-15 tr|B1NY88|B1NY88_ORYSJ Putative uncharacterized protein OS=Oryza... 71 7e-11 tr|A6VK27|A6VK27_METM7 Uncharacterized protein UPF0114 OS=Methan... 71 7e-11
>tr|A9NWL7|A9NWL7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 314
Score = 181 bits (460), Expect = 3e-44 Identities = 88/119 (73%), Positives = 102/119 (85%) Frame = +1
Query: 319 EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILL 498 EEFIEK IFNCRFLTLM V GSL GS+LCFLKGC+FV +SF+EYF + ++ G+GKVILL Sbjct: 129 EEFIEKAIFNCRFLTLMAVAGSLAGSMLCFLKGCAFVFDSFKEYFQSYIYHHGSGKVILL 188
Query: 499 LVEAVDVYLMGTVMLIFGMGLYELFISTLDVPGGNCASGGSRTTVCGSNLFGLFRLRER 675 LVEAVDVYLMGTVMLIFGMGLYELF+++L++P N SR TVCGSNLFGLFRL+ER Sbjct: 189 LVEAVDVYLMGTVMLIFGMGLYELFVNSLEIPDRNSTQQTSRATVCGSNLFGLFRLQER 247
>tr|A9TW38|A9TW38_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172311 PE=4 SV=1 Length = 475
Score = 159 bits (402), Expect = 2e-37 Identities = 80/119 (67%), Positives = 89/119 (74%) Frame = +1
Query: 319 EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILL 498 E IE+ IFNCRF TLM VVGSL GSVLCFLKG FV +SF EYF G+ T KV+ L Sbjct: 288 EAIIERVIFNCRFFTLMAVVGSLVGSVLCFLKGTLFVTQSFVEYFQAAWQGLSTSKVVFL 347
Query: 499 LVEAVDVYLMGTVMLIFGMGLYELFISTLDVPGGNCASGGSRTTVCGSNLFGLFRLRER 675 LVEAVDVYLMGTVMLIFGMGLYELF+ TL+V G C R CGSNLFGLF+++ER Sbjct: 348 LVEAVDVYLMGTVMLIFGMGLYELFVDTLEVSGAECEE--VREPACGSNLFGLFQMKER 404
>tr|A9NPX7|A9NPX7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 296
Score = 153 bits (387), Expect = 8e-36 Identities = 90/147 (61%), Positives = 102/147 (69%), Gaps = 3/147 (2%) Frame = +1
Query: 244 STSPLPASNVQGTSYSPPSSAVQYA---EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLK 414 S+S +S G + +PP + EE IE IFNCRF TLM V GSL GSVLCFLK Sbjct: 84 SSSSETSSVGSGGTLAPPIILPEQPLSLEERIEMIIFNCRFFTLMAVAGSLAGSVLCFLK 143
Query: 415 GCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTLDVP 594 G +V ESFR ++ LH TGKVILLLVEA+DVYLMGTVMLIFGMGLY LFIS+LDV Sbjct: 144 GGVYVFESFRAWYSCFLHQHATGKVILLLVEALDVYLMGTVMLIFGMGLYGLFISSLDVS 203
Query: 595 GGNCASGGSRTTVCGSNLFGLFRLRER 675 N S S TV GSNLFGLF+L+ER Sbjct: 204 AENSGSDDS-GTVFGSNLFGLFKLQER 229
>tr|Q94JM4|Q94JM4_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thaliana GN=At4g19390 PE=2 SV=1 Length = 273
Score = 136 bits (343), Expect = 1e-30 Identities = 77/153 (50%), Positives = 100/153 (65%), Gaps = 3/153 (1%) Frame = +1
Query: 226 GALPVASTSPLPASNVQGTSYSPPSSAVQYAEEFIEKTIFNCRFLTLMGVVGSLTGSVLC 405 G L ASTS +++ S ++ + EE IEK I++CRF+T +G +GSL GSVLC Sbjct: 67 GRLASASTSTSASTSTSAAVTSNSTNRFEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLC 126
Query: 406 FLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTL 585 F+KGC +VV+SF +Y V GKVI LLVEA+D+YL+GTVML+FG+GLYELFIS L Sbjct: 127 FIKGCMYVVDSFLQY------SVNRGKVIFLLVEAIDIYLLGTVMLVFGLGLYELFISNL 180
Query: 586 DVPGGNCASGGSRTTVCGSN---LFGLFRLRER 675 D + SRT SN LFG+F L+ER Sbjct: 181 D-------TSESRTHDIVSNRSSLFGMFTLKER 206
>tr|Q940D6|Q940D6_ARATH AT4g19390/T5K18_170 OS=Arabidopsis thaliana PE=2 SV=1 Length = 273
Score = 133 bits (334), Expect = 1e-29 Identities = 76/153 (49%), Positives = 99/153 (64%), Gaps = 3/153 (1%) Frame = +1
Query: 226 GALPVASTSPLPASNVQGTSYSPPSSAVQYAEEFIEKTIFNCRFLTLMGVVGSLTGSVLC 405 G L ASTS +++ S ++ + EE IEK I++CRF+T +G +GSL GSVLC Sbjct: 67 GRLASASTSTSASTSTSAAVTSNSTNRFEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLC 126
Query: 406 FLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTL 585 F+KGC +VV+SF +Y V GKVI LLVEA+D+YL+GTVML+FG+ LYELFIS L Sbjct: 127 FIKGCMYVVDSFLQY------SVNRGKVIFLLVEAIDIYLLGTVMLVFGLVLYELFISNL 180
Query: 586 DVPGGNCASGGSRTTVCGSN---LFGLFRLRER 675 D + SRT SN LFG+F L+ER Sbjct: 181 D-------TSESRTHDIVSNRSSLFGMFTLKER 206
>tr|A7Q232|A7Q232_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028719001 PE=4 SV=1 Length = 322
Score = 133 bits (334), Expect = 1e-29 Identities = 77/166 (46%), Positives = 109/166 (65%), Gaps = 6/166 (3%) Frame = +1
Query: 196 PSKLICSVHEGALP-VASTSPLPASN---VQGTSYSPPSSAVQYAEEFIEKTIFNCRFLT 363 P++ I S + + P V S+ PL ++ + SP V+Y+E IE+ IF+ RFL Sbjct: 96 PTETILSSNPPSKPLVESSRPLNSTYNYALPDPKASPIVRFVRYSESSIERVIFDFRFLA 155
Query: 364 LMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAVDVYLMGTVML 543 L+ V GSL GS+LCFL GC ++V++++ Y+ +C+ G+ TGK++L LVEA+DVYL GTVML Sbjct: 156 LLAVGGSLAGSLLCFLNGCVYIVDAYKVYWTSCVKGIHTGKMVLRLVEAIDVYLAGTVML 215
Query: 544 IFGMGLYELFISTL--DVPGGNCASGGSRTTVCGSNLFGLFRLRER 675 IFGMGLY LFIS + DVP + GS+LFG+F L+ER Sbjct: 216 IFGMGLYGLFISNVPPDVP------PSVDRALKGSSLFGMFALKER 255
>tr|B6SKX4|B6SKX4_MAIZE Uncharacterized protein UPF0114 OS=Zea mays PE=2 SV=1 Length = 266
Score = 128 bits (321), Expect = 4e-28 Identities = 79/191 (41%), Positives = 108/191 (56%), Gaps = 4/191 (2%) Frame = +1
Query: 115 AEQPAITKQTVGFTPMPLFALRRNRACPSKLICSVHEGALPVASTSPLPASNV---QGTS 285 A PA+ G +P RR + S G + +S V G + Sbjct: 10 AAPPAVHAAPAGSRLLPPALPRRRLVAVASSASSAPSGEVASSSQDGRGYGTVGGPNGHA 69
Query: 286 YSPPSSAVQYA-EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTC 462 +P + A E +E+ IF+ RFL L+ V GSL GSVLCFL GC F+ E+++ Y+ +C Sbjct: 70 IAPATDTKSTAVETTVERVIFDFRFLALLAVAGSLAGSVLCFLNGCVFIKEAYQVYWSSC 129
Query: 463 LHGVGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFISTLDVPGGNCASGGSRTTVCGS 642 + GV TG+++L +VEA+DVYL GTVMLIFGMGLY LFIS + P G S + GS Sbjct: 130 VKGVHTGQMVLKVVEAIDVYLAGTVMLIFGMGLYGLFIS--NAPAG--VPPESDRALSGS 185
Query: 643 NLFGLFRLRER 675 +LFG+F L+ER Sbjct: 186 SLFGMFALKER 196
>tr|Q8H3C6|Q8H3C6_ORYSJ Os07g0656700 protein OS=Oryza sativa subsp. japonica GN=P0047B07.113 PE=2 SV=1 Length = 286
Score = 127 bits (318), Expect = 8e-28 Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 2/130 (1%) Frame = +1
Query: 292 PPSSAVQYAEEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHG 471 PP++ E +E+ IF+ RFL L+ V GSL GS+LCFL GC ++ E++ Y+ CL G Sbjct: 87 PPTTKSTAVETTVERVIFDFRFLALLAVAGSLAGSLLCFLNGCVYIKEAYSVYWSGCLKG 146
Query: 472 VGTGKVILLLVEAVDVYLMGTVMLIFGMGLYELFIS--TLDVPGGNCASGGSRTTVCGSN 645 V TG+++L +VEA+DVYL GTVMLIFGMGLY LFIS + DVP S + GS+ Sbjct: 147 VHTGQMVLKVVEAIDVYLAGTVMLIFGMGLYGLFISNTSTDVP------SESDRALQGSS 200
Query: 646 LFGLFRLRER 675 LFG+F L+ER Sbjct: 201 LFGMFALKER 210
>tr|B4FCT5|B4FCT5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 266
Score = 127 bits (318), Expect = 8e-28 Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 12/174 (6%) Frame = +1
Query: 190 ACPSKLICSVHEGALPVASTSPLPASNVQGTSYS----PPSSAVQYA--------EEFIE 333 A P + + +V A P A + + +S+ G Y P A+ A E +E Sbjct: 28 ALPRRRLVAVASSASP-APSGEVASSSQDGRGYGTVGGPNGHAIAPATVTKSTAVETTVE 86
Query: 334 KTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILLLVEAV 513 + IF+ RFL L+ V GSL GSVLCFL GC F+ E+++ Y+ +C+ GV TG+++L +VEA+ Sbjct: 87 RVIFDFRFLALLAVAGSLAGSVLCFLNGCVFIKEAYQVYWSSCVKGVHTGQMVLKVVEAI 146
Query: 514 DVYLMGTVMLIFGMGLYELFISTLDVPGGNCASGGSRTTVCGSNLFGLFRLRER 675 DVYL GTVMLIFGMGLY LFIS + S + GS+LFG+F L+ER Sbjct: 147 DVYLAGTVMLIFGMGLYGLFISNAPA----SVAPESDRALSGSSLFGMFALKER 196
>tr|A7QKN2|A7QKN2_VITVI Chromosome chr2 scaffold_113, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001191001 PE=4 SV=1 Length = 187
Score = 127 bits (318), Expect = 8e-28 Identities = 70/119 (58%), Positives = 82/119 (68%) Frame = +1
Query: 319 EEFIEKTIFNCRFLTLMGVVGSLTGSVLCFLKGCSFVVESFREYFLTCLHGVGTGKVILL 498 E IEK I+ CRFLTL GV GSL GS+LCF+KGC++V SF EYF V VILL Sbjct: 12 EGSIEKVIYGCRFLTLFGVWGSLVGSILCFIKGCTYVAMSFMEYF------VNHTNVILL 65
Query: 499 LVEAVDVYLMGTVMLIFGMGLYELFISTLDVPGGNCASGGSRTTVCGSNLFGLFRLRER 675 LVEA+DVYL+GTVML+FGMGLYELF+S LD+ S S+LFGLF L+ER Sbjct: 66 LVEAIDVYLLGTVMLVFGMGLYELFVSNLDL----AKSLPEERNQQRSSLFGLFTLQER 120
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