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NBDC - LSDB Archive
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DK951086
Clone id TST38A01NGRL0010_H07
Library
Length 693
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_H07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GGAAAGTAGGATCCTCGGAGATTGTGAGTGCGGAGAGAGAGGGAAGGCAGGCATGGCAAC
GATGACCTCTGCGTCTGCCATCAGCAGCTCCACATTCGCTGGGCAGACTGCGTTGAAGTC
ACAGAGCGAGCTGTCCAAGAGGGTTGGCAATGTGGATGCTCGCGTGACAATGAGGAGGAC
AGTGAAGAGCACCCCAGAGAGCATCTGGTATGGCCCCGACCGCCCCAAGTACTTGGGCCC
CTTCTCTGAGGCTACCCCATCCTACCTGACCGGCGAGTTTCCGGGTGACTACGGCTGGGA
CACGGCCGGTTTGTCTGCAGACCCAGAGACATTCTCCAAGAACAGGGAGCTCGAGGTGAT
TCACGCTTGATGGGCCCCGCCCGGCGCCCTGGGGTGTGTGACCCCCAAGATGCTAGCCAA
GAACGGGGTGAAATTCGGAGAGGCAGTGTGGTTCAAGGCCGGCTCCCAGATCTTCGCCGA
CGGCGGTCTTGACTACCTGGGCAACCCCAGCCTTGTGCACGCTCAGAGCATTCTGGCCAT
CTGGGCCTGCCAAGTGGTTCTCATGGGTGCCGTTGAAGGCTACAGAGTGGGCGGCGGCCC
TCTTGGAGAGGGCCTAGACCCTGTCTACCCAGGCGGTGCCTTCGACCCCTTGGGTCTGGC
TGACGACCCCGACTCCTTCGCTGAGCTGAAGGT
■■Homology search results ■■ -
sp_hit_id P27518
Definition sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum
Align length 197
Score (bit) 345.0
E-value 1.0e-94
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951086|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_H07, 5'
         (693 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   345   1e-94
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   345   1e-94
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   343   7e-94
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   342   9e-94
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   341   2e-93
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   341   2e-93
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   341   2e-93
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   340   4e-93
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   340   6e-93
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   337   3e-92
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   326   8e-89
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   326   8e-89
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   320   3e-87
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   311   2e-84
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   311   2e-84
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   310   6e-84
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   308   1e-83
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   308   2e-83
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   308   2e-83
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   308   2e-83
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   307   4e-83
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   307   4e-83
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   306   5e-83
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   306   5e-83
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   306   7e-83
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   306   7e-83
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   305   1e-82
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   305   2e-82
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   303   4e-82
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   303   8e-82

>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  345 bits (886), Expect = 1e-94
 Identities = 164/197 (83%), Positives = 179/197 (90%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           QTALK  +EL  ++G V   RV+MRRTVKS P SIWYGPDRPKYLGPFS+  PSYLTGEF
Sbjct: 14  QTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEF 73

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTAGLSADPETF+KNRELEVIH  WA  GALGCV P++L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           GSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGA 193

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDPD+FAELK
Sbjct: 194 FDPLGLADDPDAFAELK 210


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  345 bits (885), Expect = 1e-94
 Identities = 162/192 (84%), Positives = 176/192 (91%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 283
           QT LK Q+EL ++VG    RV+MRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 284 GDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKAG 463
           GDYGWDTAGLSADPETF+KNRELEVIH  WA  GALGCV P++LAKNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAG 133

Query: 464 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 643
           SQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 SQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAF 193

Query: 644 DPLGLADDPDSF 679
           DPLGLA+DP++F
Sbjct: 194 DPLGLAEDPEAF 205


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  343 bits (879), Expect = 7e-94
 Identities = 162/197 (82%), Positives = 179/197 (90%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNV-DARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           Q   KSQ+E  ++VGN  + R+TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTAGLSADPETF++NRELEVIH  WA  GALGCV P++L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           GSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGA 193

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDP++FAELK
Sbjct: 194 FDPLGLADDPEAFAELK 210


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
           chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
          Length = 265

 Score =  342 bits (878), Expect = 9e-94
 Identities = 160/197 (81%), Positives = 181/197 (91%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           QTALKSQ+EL +++G+ +  R TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTAGLSADPETF++NRELEVIH  WA  GALGCV P++L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           GSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGA 193

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDP++FAELK
Sbjct: 194 FDPLGLADDPEAFAELK 210


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  341 bits (875), Expect = 2e-93
 Identities = 160/190 (84%), Positives = 176/190 (92%)
 Frame = +2

Query: 122 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 301
           + EL +RVG+   R+TMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 302 TAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKAGSQIFAD 481
           TAGLSADPETF++NRELEVIH+ WA  GALGCV P++L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 482 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLA 661
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD VYPGGAFDPLGLA
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA 198

Query: 662 DDPDSFAELK 691
           DDPD+FAELK
Sbjct: 199 DDPDTFAELK 208


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  341 bits (875), Expect = 2e-93
 Identities = 160/190 (84%), Positives = 176/190 (92%)
 Frame = +2

Query: 122 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 301
           + EL +RVG+   R+TMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 302 TAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKAGSQIFAD 481
           TAGLSADPETF++NRELEVIH+ WA  GALGCV P++L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 482 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLA 661
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD VYPGGAFDPLGLA
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA 198

Query: 662 DDPDSFAELK 691
           DDPD+FAELK
Sbjct: 199 DDPDTFAELK 208


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  341 bits (875), Expect = 2e-93
 Identities = 158/196 (80%), Positives = 180/196 (91%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 283
           QTALK + EL ++VG  D R +MRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTGEFP
Sbjct: 14  QTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFP 73

Query: 284 GDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKAG 463
           GDYGWDTAGLSADPETF+KNRELEVIH+ WA  GALGC+ P++L+KNGV+FGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAG 133

Query: 464 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 643
           +QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAF 193

Query: 644 DPLGLADDPDSFAELK 691
           DPLGLADDP++FAELK
Sbjct: 194 DPLGLADDPEAFAELK 209


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  340 bits (872), Expect = 4e-93
 Identities = 161/197 (81%), Positives = 179/197 (90%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           QTALKSQ+EL +++G+    R TMRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEF 73

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTAGLSADPETF++NRELEVIH  WA  GALGCV P++L+KNGV FGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKA 133

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           GSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGA 193

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDP++FAELK
Sbjct: 194 FDPLGLADDPEAFAELK 210


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  340 bits (871), Expect = 6e-93
 Identities = 162/197 (82%), Positives = 176/197 (89%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNV-DARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           +T L+  +E  ++ GN   AR TMRRTVKS PESIWYGPDRPKYLGPFSE  PSYLTGEF
Sbjct: 14  KTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEF 73

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTAGLSADPETF++NRELEVIH+ WA  GALGC  P++L KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKA 133

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           GSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGA 193

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDPDSFAELK
Sbjct: 194 FDPLGLADDPDSFAELK 210


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  337 bits (865), Expect = 3e-92
 Identities = 158/197 (80%), Positives = 177/197 (89%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALK-SQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEF 74

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTA +SADPETF+KNRELEVIH  WA  GALGCV P++LAKNG+KFGEAVWFKA
Sbjct: 75  PGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKA 134

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           G+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+ PGGA
Sbjct: 135 GAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGA 194

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDP++ AELK
Sbjct: 195 FDPLGLADDPEACAELK 211
tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 197
Score (bit) 352.0
E-value 1.0e-95
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951086|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_H07, 5'
         (693 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   352   1e-95
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   351   3e-95
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   350   4e-95
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   350   5e-95
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   350   6e-95
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   348   1e-94
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   348   1e-94
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ...   347   5e-94
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul...   345   1e-93
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul...   345   1e-93
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   345   2e-93
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   345   2e-93
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   345   2e-93
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   345   2e-93
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   344   3e-93
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   343   6e-93
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   343   8e-93
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   342   1e-92
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti...   342   2e-92
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   342   2e-92
tr|B0L0Y2|B0L0Y2_9POAL Chloroplast chlorophyll a/b binding prote...   342   2e-92
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O...   340   5e-92
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   340   5e-92
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   339   9e-92
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   339   9e-92
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   339   9e-92
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   339   1e-91
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ...   339   1e-91
tr|B0L0Y1|B0L0Y1_9POAL Chloroplast chlorophyll a/b binding prote...   339   1e-91
tr|Q41449|Q41449_SOLTU Chlorophyll a,b binding protein type I OS...   338   2e-91

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  352 bits (903), Expect = 1e-95
 Identities = 164/197 (83%), Positives = 182/197 (92%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALK-SQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           QT L+  Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 15  QTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEF 74

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTAGLSADPETF+KNRELEVIH  WA  GALGC+ P++LAKNGVKFGEAVWFKA
Sbjct: 75  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWFKA 134

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           G+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPGGA
Sbjct: 135 GAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGA 194

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDP++FAELK
Sbjct: 195 FDPLGLADDPEAFAELK 211


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_47, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
          Length = 265

 Score =  351 bits (900), Expect = 3e-95
 Identities = 166/197 (84%), Positives = 182/197 (92%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           QTALK  +EL ++VG +   R+TMRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEF 73

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTAGLSADPETF+KNRELEVIH  WA  GALGCV P++L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           G+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGA
Sbjct: 134 GAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGA 193

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDPD+FAELK
Sbjct: 194 FDPLGLADDPDAFAELK 210


>tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll
           a/b-binding polypeptide (Fragment) OS=Pinus palustris
           GN=Lhcb2 PE=2 SV=1
          Length = 246

 Score =  350 bits (899), Expect = 4e-95
 Identities = 162/190 (85%), Positives = 179/190 (94%)
 Frame = +2

Query: 122 QSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 301
           Q+EL K+VG   AR+TMRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 2   QNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 61

Query: 302 TAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKAGSQIFAD 481
           TAGLSADPETF+KNRELEVIH+ WA  GALGCV P++LAKNGVKFGEAVWFKAG+QIF++
Sbjct: 62  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSE 121

Query: 482 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAFDPLGLA 661
           GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPGGAFDPLGLA
Sbjct: 122 GGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLA 181

Query: 662 DDPDSFAELK 691
           DDP++FAELK
Sbjct: 182 DDPEAFAELK 191


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
           putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
          Length = 264

 Score =  350 bits (898), Expect = 5e-95
 Identities = 165/196 (84%), Positives = 179/196 (91%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 283
           QTALK Q+EL +RVG+   R  MRRT  STP+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 284 GDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKAG 463
           GDYGWDTAGLSADPETF+KNRELEVIH  WA  GALGCV P++LAKNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWFKAG 133

Query: 464 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 643
           +QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAF 193

Query: 644 DPLGLADDPDSFAELK 691
           DPLGLADDPD+FAELK
Sbjct: 194 DPLGLADDPDAFAELK 209


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
           OS=Pachysandra terminalis PE=2 SV=1
          Length = 264

 Score =  350 bits (897), Expect = 6e-95
 Identities = 162/196 (82%), Positives = 181/196 (92%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 283
           +TALK Q+EL K+VG    R++M RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  RTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 284 GDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKAG 463
           GDYGWDTAGLSADPETF+KNRELEVIH  WA  GALGCV P++L+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 133

Query: 464 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 643
           +QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGGAF 193

Query: 644 DPLGLADDPDSFAELK 691
           DPLGLADDP++FAELK
Sbjct: 194 DPLGLADDPEAFAELK 209


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  348 bits (894), Expect = 1e-94
 Identities = 162/196 (82%), Positives = 179/196 (91%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 283
           QT LK Q+EL ++VG    R +MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFP 73

Query: 284 GDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKAG 463
           GDYGWDTAGLSADPETF++NRELEVIH+ WA  GALGCV P++L+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 133

Query: 464 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 643
           SQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD +YPGGAF
Sbjct: 134 SQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAF 193

Query: 644 DPLGLADDPDSFAELK 691
           DPLGLADDPD+FAELK
Sbjct: 194 DPLGLADDPDAFAELK 209


>tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII
           type I OS=Lilium longiflorum PE=2 SV=1
          Length = 264

 Score =  348 bits (894), Expect = 1e-94
 Identities = 163/196 (83%), Positives = 182/196 (92%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDARVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFP 283
           QTALK++ EL ++VG V  RV+MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLTGEFP
Sbjct: 14  QTALKNRDELVRKVGVVGGRVSMRRTVKSAPQSIWYGADRPKYLGPFSEQTPSYLTGEFP 73

Query: 284 GDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKAG 463
           GDYGWDTAGLSADPETF+KNRELEVIH+ WA  GALGCV P++L+KNGVKFGEAVWFKAG
Sbjct: 74  GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKNGVKFGEAVWFKAG 133

Query: 464 SQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGAF 643
           +QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YPGGAF
Sbjct: 134 AQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAF 193

Query: 644 DPLGLADDPDSFAELK 691
           DPLGLADDPD+FAELK
Sbjct: 194 DPLGLADDPDAFAELK 209


>tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding
           protein OS=Prunus persica GN=Lhcb-Pp2 PE=2 SV=1
          Length = 265

 Score =  347 bits (889), Expect = 5e-94
 Identities = 164/197 (83%), Positives = 182/197 (92%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           QTALK  +EL +++G +   R+TMRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGEF
Sbjct: 14  QTALKQSNELIRKIGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEF 73

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTAGLSADPETF+KN ELEVIH+ WA  GALGCV P++L+KNGVKFGEAVWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNGELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           GSQIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GSQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPLYPGGA 193

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDP++FAELK
Sbjct: 194 FDPLGLADDPEAFAELK 210


>tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 265

 Score =  345 bits (886), Expect = 1e-93
 Identities = 163/197 (82%), Positives = 182/197 (92%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           QTALK  ++L ++VG+    RVTMRRTVKS P+SIWYGPDRPK+LGPFSE TPSYLTGEF
Sbjct: 14  QTALKQPNDLVRKVGSFGGGRVTMRRTVKSAPQSIWYGPDRPKFLGPFSEQTPSYLTGEF 73

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTAGLSADPETF+KNRELEVIH+ WA  GALGCV P++LAKNGVKFGE+VWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAKNGVKFGESVWFKA 133

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           G+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGA 193

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDPD+FAELK
Sbjct: 194 FDPLGLADDPDAFAELK 210


>tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 265

 Score =  345 bits (886), Expect = 1e-93
 Identities = 163/197 (82%), Positives = 182/197 (92%), Gaps = 1/197 (0%)
 Frame = +2

Query: 104 QTALKSQSELSKRVGNVDA-RVTMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEF 280
           QTALK  ++L ++VG+    RVTMRRTVKS P+SIWYGPDRPK+LGPFSE TPSYLTGEF
Sbjct: 14  QTALKQPNDLVRKVGSFGGGRVTMRRTVKSAPQSIWYGPDRPKFLGPFSEQTPSYLTGEF 73

Query: 281 PGDYGWDTAGLSADPETFSKNRELEVIHA*WAPPGALGCVTPKMLAKNGVKFGEAVWFKA 460
           PGDYGWDTAGLSADPETF+KNRELEVIH+ WA  GALGCV P++LAKNGVKFGE+VWFKA
Sbjct: 74  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAKNGVKFGESVWFKA 133

Query: 461 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPVYPGGA 640
           G+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YPGGA
Sbjct: 134 GAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGA 193

Query: 641 FDPLGLADDPDSFAELK 691
           FDPLGLADDPD+FAELK
Sbjct: 194 FDPLGLADDPDAFAELK 210