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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951088
Clone id TST38A01NGRL0010_H09
Library
Length 630
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0010_H09. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TCGAAGGTGAGAATCTTGTTCCATCAGAGGTAGAAAGAGAGGAGAGAAGGGAGGAAAGGC
GGCTTCGTTCGTGTGCTGTCATTTGCTAGTGTTTGGCGATGGTTTCAGCTCCCTGTTGAG
GCCTTCTCAACGGCTGACAGGAGCTGGATTGGTGCTGATGTAGTGCTCAGTGGATATCTT
GGTGGGGCTGGGCTTTTCATTATGAATGAAGTGCTTCCTGGAAGTCTCCGTGTCGATTCT
GCATGATGGAGTTGTCTCAAGCCCTAGCACGGTCTACCAGTATGTTGGCTCAGCAACCCC
ATCCATTCCAGGCCTTTATTGGTCTCTCAAAAGAAGGCCATTTCTCTTTTCGAGGTTTAG
TCTCTGGTGGTCACCCCCCTGGCCAGGGGCTGGTGGTGGGGGATAAAGAAGGGGCTGAGA
CATACGGGCGATGCAAGAATTTGCATATTGGAATAAGTTTTCGTGCTTGTTGGACTAGTG
ATGAGGATCCCGTAAGCTCAAGAGATGCACCTTGTCGTAGTCCAAATGTAACTTGTCAGC
AGCAGACATTGGAAAGACCTTCTCAGTACTGCATGGGGTTAGAGGTGGCAGCTCGTCATG
CCTGTAATGATGCCGGGATTGTTAATGCTC
■■Homology search results ■■ -
sp_hit_id Q6XPT5
Definition sp|Q6XPT5|MCA7_ARATH Metacaspase-7 OS=Arabidopsis thaliana
Align length 109
Score (bit) 33.5
E-value 0.92
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951088|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_H09, 5'
         (630 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6XPT5|MCA7_ARATH Metacaspase-7 OS=Arabidopsis thaliana GN=AM...    33   0.92 
sp|Q48QM3|CBIO2_STRPM Cobalt import ATP-binding protein cbiO 2 O...    32   3.5  
sp|Q1J450|CBIO2_STRPF Cobalt import ATP-binding protein cbiO 2 O...    32   3.5  
sp|Q1JEC9|CBIO2_STRPD Cobalt import ATP-binding protein cbiO 2 O...    32   3.5  
sp|Q1JJD0|CBIO2_STRPC Cobalt import ATP-binding protein cbiO 2 O...    32   3.5  
sp|Q1J983|CBIO2_STRPB Cobalt import ATP-binding protein cbiO 2 O...    32   3.5  
sp|A2RH10|CBIO1_STRPG Cobalt import ATP-binding protein cbiO 1 O...    32   3.5  
sp|Q7CMM8|CBIO1_STRP8 Cobalt import ATP-binding protein cbiO 1 O...    32   3.5  
sp|Q5X9B6|CBIO1_STRP6 Cobalt import ATP-binding protein cbiO 1 O...    32   3.5  
sp|Q79VY7|CBIO1_STRP3 Cobalt import ATP-binding protein cbiO 1 O...    32   3.5  
sp|Q99XI2|CBIO1_STRP1 Cobalt import ATP-binding protein cbiO 1 O...    32   3.5  
sp|A5DSK2|SEC24_LODEL Protein transport protein SEC24 OS=Loddero...    31   6.0  
sp|A1D1S7|SSH4_NEOFI Protein ssh4 OS=Neosartorya fischeri (strai...    30   7.8  
sp|Q4WRW0|SSH4_ASPFU Protein ssh4 OS=Aspergillus fumigatus GN=ss...    30   7.8  

>sp|Q6XPT5|MCA7_ARATH Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7
           PE=1 SV=1
          Length = 403

 Score = 33.5 bits (75), Expect = 0.92
 Identities = 27/109 (24%), Positives = 46/109 (42%)
 Frame = +3

Query: 279 SMLAQQPHPFQAFIGLSKEGHFSFRGLVSGGHPPGQGLVVGDKEGAETYGRCKNLHIGIS 458
           +M AQ     + + G S  G F  RG++  G    +      K+G E +G   N    I 
Sbjct: 299 AMQAQVKSDREIYGGRSSNGLFPDRGILLSGCQTDETSADVKKKG-EAFGAFSN---AIQ 354

Query: 459 FRACWTSDEDPVSSRDAPCRSPNVTCQQQTLERPSQYCMGLEVAARHAC 605
                T  +D +++++   R+  +  +Q  ++RP  YC    V A   C
Sbjct: 355 MVLSETDHKDKITNKEMVLRAREILKKQMFIQRPGLYCNDRFVNAPFIC 403


>sp|Q48QM3|CBIO2_STRPM Cobalt import ATP-binding protein cbiO 2
           OS=Streptococcus pyogenes serotype M28 GN=cbiO2 PE=3
           SV=1
          Length = 280

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +3

Query: 306 FQAFIGLSKEGHFSFRGLVSGGHPPGQGLVVGDKEGAETYGRCKNL-----HIGISFR 464
           + AFIG +  G  +   L++G H P  G+V  DK+    + + K +     H+G+ F+
Sbjct: 35  YTAFIGHTGSGKSTIMQLLNGLHVPTTGIVSVDKQDITNHSKNKEIKSIRKHVGLVFQ 92


>sp|Q1J450|CBIO2_STRPF Cobalt import ATP-binding protein cbiO 2
           OS=Streptococcus pyogenes serotype M4 (strain MGAS10750)
           GN=cbiO2 PE=3 SV=1
          Length = 280

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +3

Query: 306 FQAFIGLSKEGHFSFRGLVSGGHPPGQGLVVGDKEGAETYGRCKNL-----HIGISFR 464
           + AFIG +  G  +   L++G H P  G+V  DK+    + + K +     H+G+ F+
Sbjct: 35  YTAFIGHTGSGKSTIMQLLNGLHVPTTGIVSVDKQDITNHSKNKEIKSIRKHVGLVFQ 92


>sp|Q1JEC9|CBIO2_STRPD Cobalt import ATP-binding protein cbiO 2
           OS=Streptococcus pyogenes serotype M2 (strain MGAS10270)
           GN=cbiO2 PE=3 SV=1
          Length = 280

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +3

Query: 306 FQAFIGLSKEGHFSFRGLVSGGHPPGQGLVVGDKEGAETYGRCKNL-----HIGISFR 464
           + AFIG +  G  +   L++G H P  G+V  DK+    + + K +     H+G+ F+
Sbjct: 35  YTAFIGHTGSGKSTIMQLLNGLHVPTTGIVSVDKQDITNHSKNKEIKSIRKHVGLVFQ 92


>sp|Q1JJD0|CBIO2_STRPC Cobalt import ATP-binding protein cbiO 2
           OS=Streptococcus pyogenes serotype M12 (strain MGAS9429)
           GN=cbiO2 PE=3 SV=1
          Length = 280

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +3

Query: 306 FQAFIGLSKEGHFSFRGLVSGGHPPGQGLVVGDKEGAETYGRCKNL-----HIGISFR 464
           + AFIG +  G  +   L++G H P  G+V  DK+    + + K +     H+G+ F+
Sbjct: 35  YTAFIGHTGSGKSTIMQLLNGLHVPTTGIVSVDKQDITNHSKNKEIKSIRKHVGLVFQ 92


>sp|Q1J983|CBIO2_STRPB Cobalt import ATP-binding protein cbiO 2
           OS=Streptococcus pyogenes serotype M12 (strain MGAS2096)
           GN=cbiO2 PE=3 SV=1
          Length = 280

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +3

Query: 306 FQAFIGLSKEGHFSFRGLVSGGHPPGQGLVVGDKEGAETYGRCKNL-----HIGISFR 464
           + AFIG +  G  +   L++G H P  G+V  DK+    + + K +     H+G+ F+
Sbjct: 35  YTAFIGHTGSGKSTIMQLLNGLHVPTTGIVSVDKQDITNHSKNKEIKSIRKHVGLVFQ 92


>sp|A2RH10|CBIO1_STRPG Cobalt import ATP-binding protein cbiO 1
           OS=Streptococcus pyogenes serotype M5 (strain Manfredo)
           GN=cbiO1 PE=3 SV=1
          Length = 280

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +3

Query: 306 FQAFIGLSKEGHFSFRGLVSGGHPPGQGLVVGDKEGAETYGRCKNL-----HIGISFR 464
           + AFIG +  G  +   L++G H P  G+V  DK+    + + K +     H+G+ F+
Sbjct: 35  YTAFIGHTGSGKSTIMQLLNGLHVPTTGIVSVDKQDITNHSKNKEIKSIRKHVGLVFQ 92


>sp|Q7CMM8|CBIO1_STRP8 Cobalt import ATP-binding protein cbiO 1
           OS=Streptococcus pyogenes serotype M18 GN=cbiO1 PE=3
           SV=1
          Length = 280

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +3

Query: 306 FQAFIGLSKEGHFSFRGLVSGGHPPGQGLVVGDKEGAETYGRCKNL-----HIGISFR 464
           + AFIG +  G  +   L++G H P  G+V  DK+    + + K +     H+G+ F+
Sbjct: 35  YTAFIGHTGSGKSTIMQLLNGLHVPTTGIVSVDKQDITNHSKNKEIKSIRKHVGLVFQ 92


>sp|Q5X9B6|CBIO1_STRP6 Cobalt import ATP-binding protein cbiO 1
           OS=Streptococcus pyogenes serotype M6 GN=cbiO1 PE=3 SV=1
          Length = 280

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +3

Query: 306 FQAFIGLSKEGHFSFRGLVSGGHPPGQGLVVGDKEGAETYGRCKNL-----HIGISFR 464
           + AFIG +  G  +   L++G H P  G+V  DK+    + + K +     H+G+ F+
Sbjct: 35  YTAFIGHTGSGKSTIMQLLNGLHVPTTGIVSVDKQDITNHSKNKEIKSIRKHVGLVFQ 92


>sp|Q79VY7|CBIO1_STRP3 Cobalt import ATP-binding protein cbiO 1
           OS=Streptococcus pyogenes serotype M3 GN=cbiO1 PE=3 SV=1
          Length = 280

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +3

Query: 306 FQAFIGLSKEGHFSFRGLVSGGHPPGQGLVVGDKEGAETYGRCKNL-----HIGISFR 464
           + AFIG +  G  +   L++G H P  G+V  DK+    + + K +     H+G+ F+
Sbjct: 35  YTAFIGHTGSGKSTIMQLLNGLHVPTTGIVSVDKQDITNHSKNKEIKSIRKHVGLVFQ 92
tr_hit_id Q0INQ7
Definition tr|Q0INQ7|Q0INQ7_ORYSJ Os12g0408800 protein OS=Oryza sativa subsp. japonica
Align length 37
Score (bit) 34.7
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951088|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0010_H09, 5'
         (630 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0INQ7|Q0INQ7_ORYSJ Os12g0408800 protein OS=Oryza sativa subs...    35   4.9  
tr|A9DCZ5|A9DCZ5_9RHIZ Putative uncharacterized protein OS=Hoefl...    34   8.2  

>tr|Q0INQ7|Q0INQ7_ORYSJ Os12g0408800 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0408800 PE=4 SV=1
          Length = 112

 Score = 34.7 bits (78), Expect = 4.9
 Identities = 17/37 (45%), Positives = 18/37 (48%)
 Frame = -1

Query: 615 RHHYRHDELPPLTPCSTEKVFPMSAADKLHLDYDKVH 505
           RHH RH  L PL+P          AAD LHL  D  H
Sbjct: 48  RHHPRHRRLIPLSPSRAAADLHRRAADALHLSADTAH 84


>tr|A9DCZ5|A9DCZ5_9RHIZ Putative uncharacterized protein OS=Hoeflea
           phototrophica DFL-43 GN=HPDFL43_07152 PE=4 SV=1
          Length = 946

 Score = 33.9 bits (76), Expect = 8.2
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +3

Query: 405 KEGAETYGRCKNLHIGISFRAC----WTSDEDPVSSRDAPCRSPNVTCQQQTLERPSQYC 572
           K   ET G+  NL  G     C    +T+D   V  +D  C+        QT+ERPS+  
Sbjct: 349 KSNPETEGKMVNLGFGRIRATCELAAFTTDNSAVGLKDTGCQLNWNVPGNQTVERPSEPL 408

Query: 573 MGLEV 587
            GLE+
Sbjct: 409 EGLEI 413